Physical Sciences and Mathematics Commons^™

Ensemble Forecast Spread Induced By Soil Moisture Changes Over Mid-South And Neighbouring Midwestern Region Of The Usa, Arturo I. Quintanar, Rezaul Mahmood

School of Natural Resources: Faculty Publications

This study investigated the potential impact of soil moisture perturbations on the statistical spread of an ensemble forecast for three different synoptic events during the summer of 2006. Soil moisture was perturbed from a control simulation to generate a 12 member ensemble with six drier and six moister soils. The impacts on the near-surface atmospheric conditions and on precipitation were analysed. It was found, as previous studies have confirmed, that soil moisture can change the spatial and temporal distribution of precipitation and of the overlying circulation. It was found that regardless of the conditions in synoptic forcing, temperature, relative humidity …

Affinity Chromatography In Environmental Analysis And Drug-Protein Interaction Studies, Efthimia Papastavros

Department of Chemistry: Dissertations, Theses, and Student Research

This dissertation will examine the use of novel affinity sorbents to extract emerging contaminants from water. These contaminants include carbamazepine, an anti-epileptic drug which is resistant to natural degradation in the environmental and to drinking water treatment procedures. This drug has been found in fish, drinking water, estuarine and coastal waters, and river sediment and has been used as a general marker of contaminants in wastewater. Carbamazepine was one of the most commonly detected compounds in surface-water and groundwater samples in a recent reconnaissance study of untreated drinking water sources in the U.S. Besides using this drug as a representative …

Analyzing Ecohydrology Of Subirrigated Meadow, Dry Valley And Upland Dune Ecosystems Using Remote Sensing And In-Situ Estimations In The Semiarid Sand Hills Region Of Nebraska, Usa, Nathan C. Healey

School of Natural Resources: Dissertations, Theses, and Student Research

Nebraska’s dependence upon the High Plains (Ogallala) Aquifer for agricultural production is vital to the state’s economy, ecology and hydrology. The Sand Hills region (58,000 km²) of Nebraska is a unique system of lakes, (~5%) wetlands, (~10%) subirrigated meadows, (~20%) dry valleys and (~65%) upland sand dune ecosystems. Understanding how each of these land cover types reacts to climate conditions of different water limitations is vital to regional water resource management. This research explores the ecohydrological behavior of different land cover types at the Gudmundsen Sand Hills Research Laboratory (GSRL) near Whitman, Nebraska in the heart of the …

A Study Of Correlations Between The Definition And Application Of The Gene Ontology, Yuji Mo

Computer and Electronics Engineering: Dissertations, Theses, and Student Research

When using the Gene Ontology (GO), nucleotide and amino acid sequences are annotated by terms in a structured and controlled vocabulary organized into relational graphs. The usage of the vocabulary (GO terms) in the annotation of these sequences may diverge from the relations defined in the ontology. We measure the consistency of the use of GO terms by comparing GO's defined structure to the terms' application. To do this, we first use synthetic data with different characteristics to understand how these characteristics influence the correlation values determined by various similarity measures. Using these results as a baseline, we found that …

Development And Optimization Of Organic Based Monoliths For Use In Affinity Chromatography, Erika L. Pfaunmiller

Department of Chemistry: Dissertations, Theses, and Student Research

Affinity chromatography is an important and useful tool for studying biological interactions, such as the binding of an antibody with an antigen. Monolithic supports offer many advantages over traditional packed bed supports in affinity chromatography, including their ease of preparation, low back pressures and good mass transfer properties. Monoliths can be broken down into two basic categories: organic (polymer) and inorganic (silica) monoliths. There are many varieties of polymer based monoliths; however, a large focus has been on co-polymers of glycidyl methacrylate (a functional monomer) and ethylene dimethacrylate (a cross-linking agent). The solvents of choice for making this type of …

Two Dimensional Electron Gas At Oxide Interfaces, Karolina Janicka

Department of Physics and Astronomy: Dissertations, Theses, and Student Research

Extraordinary phenomena can occur at the interface between two oxide materials. A spectacular example is a formation of a two-dimensional electron gas (2DEG) at the SrTiO₃/LaAlO₃ interface. In this dissertation the properties of the 2DEG are investigated from first principles.

The spatial extent of the 2DEG formed at the SrTiO₃/LaAlO₃ n-type interface is studied. It is shown that the confinement of the 2DEG is controlled by metal induced gap states formed in the band gap of SrTiO₃. The confinement width is then determined by the attenuation length of the metal induced gap …

Studying The Handling Of Heat Stressed Cattle Using The Additive Bi-Logistic Model To Fit Body Temperature, Fan Yang

Department of Statistics: Dissertations, Theses, and Student Work

Daily activities consume the energy of heifers, subsequently causing an elevation of body temperature, depending on the ambient conditions. A better understanding of the dynamics of body temperature (Tb) would be helpful when deciding how to process and handle heifers. It would also lead to specific recommendations on moving heifers under different ambient conditions, especially during the summer. In this study, a bi-logistic mixed model is used to describe the dynamics of Tb during the moving event. Data were taken from heifers in pens located at different distances from the heifer work station on four separate summer days under hot …

Ecophysiological Responses Of Herbaceous Plants To The Presence Or Absence Of Amorpha Canescens In A Nebraska Sandhills Grassland, Jessica L. Milby

School of Natural Resources: Dissertations, Theses, and Student Research

Deeply-rooted shrubs are a common component of grasslands. This study investigated the ecophysiological role of Amorpha canescens, a common leguminous shrub, in Sandhills grassland, and response of herbaceous plants to the presence or absence of A. canescens. Two sites were selected for the study at the Gudmundsen Sandhills Laboratory near Whitman, Nebraska – one with A. canescens (G-L) and one without (G-NL) A. canescens. Plant canopy cover and aboveground biomass were characterized on both sites in June and August 2010. Seasonal trends in net photosynthesis (A), stomatal conductance (gs), transpiration (E), water use efficiency (WUE), and predawn …

Climatic Controls On The Summertime Energy Balance Of A Thermokarst Lake In Northern Alaska: Short-Term, Seasonal, And Interannual Variability, Brittany L. Potter

School of Natural Resources: Dissertations, Theses, and Student Research

Shallow, thermokarst lakes that develop atop permafrost are a prominent landscape feature on the Arctic Coastal Plain (ACP) of northern Alaska. The ACP is vulnerable to ongoing climate change and landscape modification, as thousands of thaw lakes and ponds are impacted by changes in temperature, precipitation, thawing permafrost, and human activity. Although summer in the Arctic is short, incoming solar radiation and lake evaporation are relatively high, and both factors play a significant role in the landscape water balance. Furthermore, lake evaporation is anticipated to increase as the ice-free season lengthens and water temperatures become warmer. To improve our understanding …

Abiotic Stress Responses In Photosynthetic Organisms, Joseph Msanne

School of Natural Resources: Dissertations, Theses, and Student Research

Cellular and molecular aspects of abiotic stress responses in Arabidopsis thaliana subjected to cold, drought, and high salinity and in two photosynthetic green alga, Chlamydomonas reinhardtii and Coccomyxa sp. C-169, subjected to nitrogen deprivation were investigated. Cold, drought, and high salinity can negatively affect plant growth and crop production. The first research aimed at determining the physiological functions of the stress-responsive Arabidopsis thaliana RD29A and RD29B genes. Cold, drought, and salt induced both genes; the promoter of RD29Awas found to be more responsive to drought and cold stresses, whereas the promoter of RD29B was highly responsive to salt stress. …

Review Of Teaching Children Science: Hands-On Nature Study In North America, 1890-1930 By Sally Kohlstedt, Meena M. Balgopal

The Prairie Naturalist

Many scientists and educators agree that the goal of science education is to prepare students "to know, use and interpret scientific explanations of the natural world," as cited in the National Research Council publication, Taking Science to School: Learning and Teaching Science in Grades K-8 (DuschI et al. 2007). Yet, many science instructors of K-12 and post-secondary students often rely on teacher-telling modes of pedagogy and neglect to engage their students in natural inquiry and scientific study that model the research methods used by scientists. As a result, many young people are not aware of how scientists make discoveries about …

Genetic Structure Of Grass Carp Populations In The Missouri And Mississippi River Basins, Usa, Bobbi M. Adams, Katie N. Bertrand, Michael L. Brown, Donald Auger

The Prairie Naturalist

We provided an early characterization of the genetic structure of the grass carp (Ctenopharyngodon idella) population as it expands its distribution in both the Missouri and Mississippi River basins. Further, we provided initial comparisons of allelic richness at 17 polymorphic microsatellite markers between 56 grass carp from the USA, and six from the Yangtze River in China. The number of alleles per locus ranged from two to eight and size ranges of alleles for fish collected from the invaded and native ranges were similar (P ≤ 0.001; 107–226 bp) to those previously reported in the literature. Distance-based clustering …

Late Seasonal Captures Of The Plains Pocket Mouse (Perognathus Flavescens) In Iowa, Hans W. Otto, Jeremy A. White

The Prairie Naturalist

The plains pocket mouse, Perognathus flavescens, is a nocturnal granivore that inhabits friable soils in sparsely vegetated areas (Monk and Jones 1996). In the United States, the distribution of the plains pocket mouse extends from Arizona, New Mexico, and Texas through the Great Plains to North Dakota and Minnesota (Hall 1981). This species reaches its easternmost limits in Iowa, where it has been documented from a limited number of grassland sites in eastern, central, and western parts of the state (Bowles 1975, Wilson et al. 1996). Due to loss of grassland habitat, the plains pocket mouse is currently listed …

Modeling Parental Provisioning By Red-Winged Blackbirds In North Dakota, George M. Linz, Richard S. Sawin, Mark W. Lutman, William J. Bleier

The Prairie Naturalist

Male red-winged blackbirds (Agelaius phoeniceus) exhibit a difference in nest provisioning rates along an east-west gradient in North America. North Dakota is located in the center of North America and harbors a large population of breeding red-winged blackbirds (RWBL). This location provided an opportunity to compare provisioning rates in the central U.S. with those reported for the eastern and western populations. We placed video cameras at RWBL nests to record male and female feeding trips. Thirty-four nests were located on territories with original males and 30 were on territories where a replacement (floater) male had taken over a …

Review Of Sandhill And Whooping Cranes: Ancient Voices Over America's Wetlands\ By Paul Johnsgard, Jane Austin

The Prairie Naturalist

Paul Johnsgard has long been captivated by wild cranes and their unique vocalizations, courtship dances, and wide-ranging migrations. As a scientist and an admirer, Johnsgard has watched their migrations and behaviors for decades as hundreds of thousands of cranes staged each spring by the central Platte River, not far from his home in Lincoln, Nebraska. As an artist, he has skillfully captured their courtship dances and other behaviors in his exceptional line drawings. And, as an author, he has written extensively on their ecology in three earlier books: Cranes of the World (1983), Those of the Gray Wind: The Sandhill …

Massasauga Repatriation On A Restored Wet Prairie, Francis E. Durbian, Brian N. Lomas, Jeff Briggler, Paul Mckenzie, Tom Nagel

The Prairie Naturalist

The massasauga (Sistrurus catenatus) is a small rattlesnake that occurs from Texas to New York (Schmidt and Davis 1941, Conant and Collins 1991, Szymanski 1998). In Missouri, the Eastern massasauga rattlesnake (EMR; S. c. catenatus), a subspecies of the massasauga, occurs north and east of the Missouri River, is a former candidate for listing under the United States Endangered Species Act (Code of Federal Regulations 64 FR 57534; Szymanski 1998), and is listed as a state endangered species (Missouri Natural Heritage Program 2011). Missouri currently harbors five extant EMR populations (Johnson 2000, Durbian et al., unpublished report, …

Book Review Of Encyclopedia Of Biological Invasions, Edited By Daniel Simberloff And Marcel Rejmanek, Qinfeng Guo

The Prairie Naturalist

Book review of Encyclopedia of Biological Invasions, edited by Daniel Simberloff and Marcel Rejmanek.

Species introductions and consequent biotic invasions and homogenization are major components of global change that are drawing increasing concern and various levels of actions and reactions around the world. Invasion ecology has advanced rapidly during the last few decades, and the discipline is now increasingly integrated with the social and economic sciences. A better understanding of the invasion process and its effects is thus clearly needed. For basic research, invasion biology offers fascinating and sometimes unique opportunities for testing certain ecological or evolutionary theories and …

Book Review: Effects Of Climate Change On Birds, Edited By Anders Pape Meller, Wolfgang Fiedler, And Peter Berthold, Brian J. Olsen

The Prairie Naturalist

Book review of Effects of Climate Change on Birds, edited by Anders Pape Meller, Wolfgang Fiedler, and Peter Berthold.

Climate scientists from across the globe predict vast changes during the next century in the planet's temperatures, precipitation, storm intensities, fire regimes, hydrologic cycles, and atmospheric, water, and soil chemistries. The changes will be global, but their effects will be felt locally everywhere. To find a scientifically and socially engaging bellwether of these events, we need to look only through the lens of avian biology. Birds are found from pole to pole; their movements connect continents. They are loud, colorful …

Northern Harrier Hatches Mallard Nest, Jeffery W. Stackhouse, Benjamin A. Geaumont

The Prairie Naturalist

The northern harrier (Circus cyaneus) is a widespread raptor commonly found nesting throughout the Northern Great Plains. Northern harriers forage primarily on small mammals and passerines with the males providing the majority of prey to nestlings until 14–28 days of age (Redpath et al. 2006, Vukovich and Ritchison 2006). Although the genus Circus is known to predate eggs from nest of many nesting birds (Hiraldo et al. 1975, Donaszar et al. 1996, Opermanis et al. 2000), few have been recorded commandeering nests of different species (Laine 1928, Fleskes 1992). In June 2010, we observed a northern harrier that …

Comparison Of Fish Communities In Recently Constructed Side-Channel Chutes With The Main Stem Missouri River, Kasey Whiteman, Vincent H. Travnichek, Darrick L. Garner, Brandon Eder, Kirk Steffensen

The Prairie Naturalist

Two United States Army Corp of Engineers- (USACE) funded projects were conducted from 2006 to 2008 along the Missouri River to monitor fish communities in recently constructed side-channel chutes and to monitor pallid sturgeon (Scaphirhynchus albus) and the associated fish assemblage in the main stem Missouri River. Data from both monitoring projects were compared to evaluate fish assemblages among four mitigated habitats (e.g., constructed side-channel chutes) and the main-stem Missouri River. Chutes had a greater overall number of species (n = 59) and higher species richness (Margalef’s index = 5.81), but richness was not different (F1, 4 = …

Notes On The Distribution Of Eastern Woodrats And Hispid Cotton Rats In South-Central Nebraska, Heather D. Wills, Keith Geluso, Eric J. Smits, Joseph T. Springer, Wesley E. Newton

The Prairie Naturalist

The eastern woodrat (Neotoma floridana) and hispid cotton rat (Sigmodon hispidus) reach distributional limits in southern Nebraska (Jones 1964, Farney 1975). In the last half-century, both species have expanded their distributional ranges in the region (Kugler and Geluso 2009, Wright et al. 2010). Herein, we report new localities of occurrence for both species that extend known distributional boundaries in south-central Nebraska beyond those reported by Kugler and Geluso (2009) and Wright et al. (2010).

Associated with other studies, we captured small mammals in Sherman live-traps in south-central Nebraska. Voucher specimens were deposited in collections at the …

Climate Change And Climate Variability: El Salvador – Impacts On Productivity Of Grain Crops And Opportunities For Management And Improvement, P. V. Vara Prasad

INTSORMIL Presentations

1. Climate change and climate variability (past and future).

2. Climate change and variability in El Salvador (climate models).

3. Impact of temperature on grain yield of dry bean, maize and sorghum in El Salvador (crop simulation models).

4. Effects of temperature, drought and/or carbon dioxide: experimental evidence (response of grain sorghum, maize and dry bean).

5. Opportunities for crop management and genetic improvement.

Adaptive Management Of Bull Trout Populations In The Lemhi Basin, Andrew J. Tyre, James T. Peterson, Sarah J. Converse, Tiffany Bogich, Damien Miller, Max Post Van Der Burg, Carmen Thomas, Ralph Thompson, Jeri Wood, Donna C. Brewer, Michael C. Runge

School of Natural Resources: Faculty Publications

The bull trout Salvelinus confluentus, a stream-living salmonid distributed in drainages of the northwestern United States, is listed as threatened under the Endangered Species Act because of rangewide declines. One proposed recovery action is the reconnection of tributaries in the Lemhi Basin. Past water use policies in this core area disconnected headwater spawning sites from downstream habitat and have led to the loss of migratory life history forms. We developed an adaptive management framework to analyze which types of streams should be prioritized for reconnection under a proposed Habitat Conservation Plan. We developed a Stochastic Dynamic Program that identified optimal …

Characterizing The Performance Of Ecosystem Models Across Time Scales: A Spectral Analysis Of The North American Carbon Program Site-Level Synthesis, Michael C. Dietze, Rodrigo Vargas, Andrew D. Richardson, Paul C. Stoy, Alan G. Barr, Ryan S. Anderson, M. Altaf Arain, Ian T. Baker, T. Andrew Black, Jing M. Chen, Philippe Ciais, Lawrence B. Flanagan, Christopher M. Gough, Robert F. Grant, David Hollinger, R. Cesar Izaurralde, Christopher J. Kucharik, Peter Lafleur, Shugang Liu, Erandathie Lokupitiya, Yiqi Luo, J. William Munger, Changhui Peng, Benjamin Poulter, David T. Price, Daniel M. Ricciuto, William J. Riley, Alok Kumar Sahoo, Kevin Schaefer, Andrew E. Suyker, Hanqin Tian, Christina Tonitto, Hans Verbeeck, Shashi B. Verma, Weifeng Wang, Ensheng Weng

School of Natural Resources: Faculty Publications

Ecosystem models are important tools for diagnosing the carbon cycle and projecting its behavior across space and time. Despite the fact that ecosystems respond to drivers at multiple time scales, most assessments of model performance do not discriminate different time scales. Spectral methods, such as wavelet analyses, present an alternative approach that enables the identification of the dominant time scales contributing to model performance in the frequency domain. In this study we used wavelet analyses to synthesize the performance of 21 ecosystem models at 9 eddy covariance towers as part of the North American Carbon Program’s site-level intercomparison. This study …

Heritable Choice Of Colony Size In Cliff Swallows: Does Experience Trump Genetics In Older Birds?, Erin A. Roche, Charles R. Brown, Mary Bomberger Brown

School of Natural Resources: Faculty Publications

The variation in breeding colony size seen in populations of most colonial birds may reflect heritable choices made by individuals that are phenotypically specialized for particular social environments. Although a few studies have reported evidence for genetically based choice of group sizes in birds, we know relatively little about the extent to which animals potentially rely on experience versus innate preferences in deciding how many conspecifics to settle with at different times of their lives. We conducted a cross-fostering experiment in 1997–1998 on cliff swallows, Petrochelidon pyrrhonota, in southwestern Nebraska, USA, in which some individuals were reared in colonies …

Missouri National Recreational River, Natural Resource Condition Assessment, Kevin J. Stark, Lucas J. Danzinger, Michael R. Komp, Andy J. Nadeau, Shannon Amberg, Eric J. Iverson, David Kadlec, Barry Drazkowski

United States National Park Service: Publications

Executive Summary

As a unit in the National Park Service (NPS), Missouri National Recreational River (MNRR) is responsible for the management and conservation of natural resources within its boundaries. This mandate is supported by the National Park Service Organic Act of 1916, which directs the NPS to:

conserve the scenery and natural and historic objects and the wildlife therein and to provide for the enjoyment of the same in such a manner and by such means as will leave them unimpaired for the enjoyment of future generations.

In 2003, NPS Water Resources Division received funding through the Natural Resource Challenge …

Scotts Bluff National Monument Plant Community Composition And Structure Monitoring, 2011 Annual Report, Isabel W. Ashton, Michael Prowatzke, Michael R. Bynum, Tim Shepherd, Stephen K. Wilson, Kara Paintner-Green

United States National Park Service: Publications

Executive Summary

The Northern Great Plains Inventory & Monitoring Network (NGPN) was established to develop and provide scientifically credible information on the current status and long-term trends of the composition, structure, and function of ecosystems in thirteen parks located in five northern Great Plains states. NGPN identified upland plant communities, exotic plant early detection, and riparian lowland communities as vital signs that can be used to better understand the condition of terrestrial park ecosystems (Gitzen et al. 2010). Upland and riparian ecosystems are important targets for vegetation monitoring because the status and trends in plant communities provide critical insights into …

Agate Fossil Beds National Monument Plant Community Composition And Structure Monitoring, 2011 Annual Report, Isabel W. Ashton, Michael Prowatzke, Michael R. Bynum, Tim Shepherd, Stephen K. Wilson, Kara Paintner-Green

United States National Park Service: Publications

Executive Summary

The Northern Great Plains Inventory & Monitoring Network (NGPN) was established to develop and provide scientifically credible information on the current status and long-term trends of the composition, structure, and function of ecosystems in thirteen parks located in five northern Great Plains states. NGPN identified upland plant communities, exotic plant early detection, and riparian lowland communities as vital signs that can be used to better understand the condition of terrestrial park ecosystems (Gitzen et al. 2010). Upland and riparian ecosystems are important targets for vegetation monitoring because the status and trends in plant communities provide critical insights into …

Atlantic Multidecadal Oscillation-Forced Regional Summertime Precipitation Variations In The Central United States, Michael C. Veres

Department of Earth and Atmospheric Sciences: Dissertations, Theses, and Student Research

The purpose of this research is to identify the regional mechanisms by which the Atlantic Multidecadal Oscillation (AMO) influences summer (June-August) precipitation in the central U.S. This was accomplished by running two different sets of simulations using the Weather Research and Forecasting (WRF) regional climate model, one forced by observations and the other forced only by variations in the AMO as obtained via a global climate model (GCM). The results reveal a complex set of mechanisms active in the lower and middle troposphere by which the AMO influences summer circulation and precipitation in the central U.S. During the cold phase …

Depth And Littoral Habitat Association Of Age-0 Yellow Perch In Two South Dakota Glacial Lakes, Daniel J. Dembkowski, Melissa R. Wuellner, David W. Willis

The Prairie Naturalist

Yellow perch (Perca flavescens) are a recreationally important species and represent a key ecological component of glacial lake littoral fish assemblages (Stone 1996, Blackwell et al. 1999). Research has shown a generalized pattern of juvenile (age-0) yellow perch spatial distribution wherein larvae hatch in near-shore areas, migrate to limnetic areas where they remain for approximately 40 d, and then return to demersal behaviors and within near-shore littoral habitats (Noble 1975, Whiteside et al. 1985). However, anomalous distribution and habitat use by age-0 yellow perch has been observed in South Dakota glacial lakes (Fisher and Willis 1997) and the …