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Theses/Dissertations

2019

Bayesian

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Full-Text Articles in Physical Sciences and Mathematics

On Improving Performance Of The Binary Logistic Regression Classifier, Michael Chang Dec 2019

On Improving Performance Of The Binary Logistic Regression Classifier, Michael Chang

UNLV Theses, Dissertations, Professional Papers, and Capstones

Logistic Regression, being both a predictive and an explanatory method, is one of the most commonly used statistical and machine learning method in almost all disciplines. There are many situations, however, when the accuracies of the fitted model are low for predicting either the success event or the failure event. Several statistical and machine learning approaches exist in the literature to handle these situations. This thesis presents several new approaches to improve the performance of the fitted model, and the proposed methods have been applied to real datasets.

Transformations of predictors is a common approach in fitting multiple linear and …


Habitat Associations And Reproduction Of Fishes On The Northwestern Gulf Of Mexico Shelf Edge, Elizabeth Marie Keller Nov 2019

Habitat Associations And Reproduction Of Fishes On The Northwestern Gulf Of Mexico Shelf Edge, Elizabeth Marie Keller

LSU Doctoral Dissertations

Several of the northwestern Gulf of Mexico (GOM) shelf-edge banks provide critical hard bottom habitat for coral and fish communities, supporting a wide diversity of ecologically and economically important species. These sites may be fish aggregation and spawning sites and provide important habitat for fish growth and reproduction. Already designated as habitat areas of particular concern, many of these banks are also under consideration for inclusion in the expansion of the Flower Garden Banks National Marine Sanctuary. This project aimed to gain a more comprehensive understanding of the communities and fish species on shelf-edge banks by way of gonad histology, …


Allocative Poisson Factorization For Computational Social Science, Aaron Schein Jul 2019

Allocative Poisson Factorization For Computational Social Science, Aaron Schein

Doctoral Dissertations

Social science data often comes in the form of high-dimensional discrete data such as categorical survey responses, social interaction records, or text. These data sets exhibit high degrees of sparsity, missingness, overdispersion, and burstiness, all of which present challenges to traditional statistical modeling techniques. The framework of Poisson factorization (PF) has emerged in recent years as a natural way to model high-dimensional discrete data sets. This framework assumes that each observed count in a data set is a Poisson random variable $y ~ Pois(\mu)$ whose rate parameter $\mu$ is a function of shared model parameters. This thesis examines a specific …


Differential Estimation Of Audiograms Using Gaussian Process Active Model Selection, Trevor Larsen May 2019

Differential Estimation Of Audiograms Using Gaussian Process Active Model Selection, Trevor Larsen

McKelvey School of Engineering Theses & Dissertations

Classical methods for psychometric function estimation either require excessive resources to perform, as in the method of constants, or produce only a low resolution approximation of the target psychometric function, as in adaptive staircase or up-down procedures. This thesis makes two primary contributions to the estimation of the audiogram, a clinically relevant psychometric function estimated by querying a patient’s for audibility of a collection of tones. First, it covers the implementation of a Gaussian process model for learning an audiogram using another audiogram as a prior belief to speed up the learning procedure. Second, it implements a use case of …


A Bayesian Framework For Estimating Seismic Wave Arrival Time, Hua Zhong May 2019

A Bayesian Framework For Estimating Seismic Wave Arrival Time, Hua Zhong

Graduate Theses and Dissertations

Because earthquakes have a large impact on human society, statistical methods for better studying earthquakes are required. One characteristic of earthquakes is the arrival time of seismic waves at a seismic signal sensor. Once we can estimate the earthquake arrival time accurately, the earthquake location can be triangulated, and assistance can be sent to that area correctly. This study presents a Bayesian framework to predict the arrival time of seismic waves with associated uncertainty. We use a change point framework to model the different conditions before and after the seismic wave arrives. To evaluate the performance of the model, we …


Mle And Bayesian Methods To Analyze Data With Missing Values Below The Limit Of Detection, Xinxin Hu Apr 2019

Mle And Bayesian Methods To Analyze Data With Missing Values Below The Limit Of Detection, Xinxin Hu

Theses and Dissertations

As pesticides are widely used in agriculture, more and more people who work at places like farm are exposed to the pesticides. According to enviroment re- searches [Villarejo; 2003; Reigart and Roberts; 1999], being exposed to some kind of pesticides like Organophosphorus (OP) insecticides has significantly effected the health of farmworkers and their family. The actual level of pesticides can be detected with some limitation for now. However, it is hard to detect when the level is below the limit of detection (LOD). Therefore, the goal of our research is to propose several different methods to analyze data …


Exploring The Behavior Of Model Fit Criteria In The Bayesian Approximate Measurement Invariance: A Simulation Study, Abeer Atallah S. Alamri Feb 2019

Exploring The Behavior Of Model Fit Criteria In The Bayesian Approximate Measurement Invariance: A Simulation Study, Abeer Atallah S. Alamri

USF Tampa Graduate Theses and Dissertations

Measurement invariance (MI) is conducted to ensure that differences found in the results of group comparisons are due to true substantive differences and not methodological artifacts. Previous cross-cultural and cross-national studies with large number of groups showed that the advanced measurement invariance level was rarely held when utilizing the traditional (frequentist) MI approach. The Bayesian approximate measurement invariance (BAMI) was introduced to override the traditional MI strict assumption, because trivial non-invariance in parameters across groups is allowed. Although the concept of the BAMI, which has been utilized since 2013, was incorporated into the context of structural equation modeling, there is …


Site- And Location-Adjusted Approaches To Adaptive Allocation Clinical Trial Designs, Brian S. Di Pace Jan 2019

Site- And Location-Adjusted Approaches To Adaptive Allocation Clinical Trial Designs, Brian S. Di Pace

Theses and Dissertations

Response-Adaptive (RA) designs are used to adaptively allocate patients in clinical trials. These methods have been generalized to include Covariate-Adjusted Response-Adaptive (CARA) designs, which adjust treatment assignments for a set of covariates while maintaining features of the RA designs. Challenges may arise in multi-center trials if differential treatment responses and/or effects among sites exist. We propose Site-Adjusted Response-Adaptive (SARA) approaches to account for inter-center variability in treatment response and/or effectiveness, including either a fixed site effect or both random site and treatment-by-site interaction effects to calculate conditional probabilities. These success probabilities are used to update assignment probabilities for allocating patients …


Exploring A Bayesian Analysis Of Opinion Dynamics Using The Approximate Bayesian Computation Method, Jessica L. Bishop Jan 2019

Exploring A Bayesian Analysis Of Opinion Dynamics Using The Approximate Bayesian Computation Method, Jessica L. Bishop

Graduate Research Theses & Dissertations

Social media has created a whole new framework in the way we understand ones expression of opinion, and how ones' opinion can influence others. Models of opinion dynamics, such as a probabilistic modeling framework of opinion dynamics over time are given by Abir De, Isabel Valera, Niloy Ganguly, Sourangshu Bhattacharya, and Manuel Gomez Rodriguez in ``Learning and Forecasting Opinion Dynamics in Social Networks." In this paper, we will continue to explore their models, now coming from a Bayesian statistical standpoint, specifically looking at the Approximate Bayesian Computation (ABC) method for the computation of better estimations for the data. We will …


Evaluation Of Epilepsy Surgery Using Bayesian Multinomial Regression, Kacy Danielle Kane Jan 2019

Evaluation Of Epilepsy Surgery Using Bayesian Multinomial Regression, Kacy Danielle Kane

Graduate Research Theses & Dissertations

We are exploring the effectiveness of brain surgeries that are supposed to eliminate or reduce the frequency of seizures in young Epilepsy patients. The long-term effectiveness of brain surgeries is evaluated by ordinal categories and brings longitudinal categorical responses.

Using a Bayesian multinomial regression model we examine the responses by the lobe of brain and other covariates as well as time. To overcome computational difficulties we utilize latent variables for multinomial responses and compare the results with frequentists methods.


Uncovering The Drivers Of Non-Native Plant Invasions Using Ecological Data Synthesis, Marina Golivets Jan 2019

Uncovering The Drivers Of Non-Native Plant Invasions Using Ecological Data Synthesis, Marina Golivets

Graduate College Dissertations and Theses

Understanding what promotes invasiveness of species outside their native range and predicting which ecosystems and under which conditions will be invaded is an ultimate goal of the field of invasion ecology. Obtaining general answers to these questions requires synthesis of extensive yet heterogeneous empirical evidence, coupled with a solid theoretical background. In this dissertation, I sought to provide insight into the drivers of non-native plant invasions through combining and synthesizing ecological data from various sources using advanced statistical techniques. The results of this work are presented as three independent research studies.

In the first study, I aimed to understand what …


Bayesian Hierarchical Meta-Analysis Of Asymptomatic Ebola Seroprevalence, Peter Brody-Moore Jan 2019

Bayesian Hierarchical Meta-Analysis Of Asymptomatic Ebola Seroprevalence, Peter Brody-Moore

CMC Senior Theses

The continued study of asymptomatic Ebolavirus infection is necessary to develop a more complete understanding of Ebola transmission dynamics. This paper conducts a meta-analysis of eight studies that measure seroprevalence (the number of subjects that test positive for anti-Ebolavirus antibodies in their blood) in subjects with household exposure or known case-contact with Ebola, but that have shown no symptoms. In our two random effects Bayesian hierarchical models, we find estimated seroprevalences of 8.76% and 9.72%, significantly higher than the 3.3% found by a previous meta-analysis of these eight studies. We also produce a variation of this meta-analysis where we exclude …