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Physical Sciences and Mathematics Commons

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Theses/Dissertations

2016

USF Tampa Graduate Theses and Dissertations

Big data

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Full-Text Articles in Physical Sciences and Mathematics

Parallelization Of Push-Based System For Molecular Simulation Data Analysis With Gpu, Iliiazbek Akhmedov Oct 2016

Parallelization Of Push-Based System For Molecular Simulation Data Analysis With Gpu, Iliiazbek Akhmedov

USF Tampa Graduate Theses and Dissertations

Modern simulation systems generate big amount of data, which consequently has to be analyzed in a timely fashion. Traditional database management systems follow principle of pulling the needed data, processing it, and then returning the results. This approach is then optimized by means of caching, storing in different structures, or doing some sacrifices on precision of the results to make it faster. When it comes to the point of doing various queries that require analysis of the whole data, this design has the following disadvantages: considerable overhead on traditional disk random I/O framework while reading from the simulation output files …


Fast Computation On Processing Data Warehousing Queries On Gpu Devices, Sam Cyrus Jun 2016

Fast Computation On Processing Data Warehousing Queries On Gpu Devices, Sam Cyrus

USF Tampa Graduate Theses and Dissertations

Current database management systems use Graphic Processing Units (GPUs) as dedicated accelerators to process each individual query, which results in underutilization of GPU. When a single query data warehousing workload was run on an open source GPU query engine, the utilization of main GPU resources was found to be less than 25%. The low utilization then leads to low system throughput. To resolve this problem, this paper suggests a way to transfer all of the desired data into the global memory of GPU and keep it until all queries are executed as one batch. The PCIe transfer time from CPU …