Physical Sciences and Mathematics Commons^™

An Experimental Study On Network Intrusion Detection Systems, Peng Fu

Theses

A signature database is the key component of an elaborate intrusion detection system. The efficiency of signature generation for an intrusion detection system is a crucial requirement because of the rapid appearance of new attacks on the World Wide Web. However, in the commercial applications, signature generation is still a manual process, which requires professional skills and heavy human effort. Knowledge Discovery and Data Mining methods may be a solution to this problem. Data Mining and Machine Learning algorithms can be applied to the network traffic databases, in order to automatically generate signatures.

The purpose of this thesis and the …

Face Recognition Using Principal Component Analysis, Timothy Kevin Larkin

Theses

Current methods of face recognition use linear methods to extract features. This causes potentially valuable nonlinear features to be lost. Using a kernel to extract nonlinear features should lead to better feature extraction and, therefore, lower error rates. Kernel Principal Component Analysis (KPCA) will be used as the method for nonlinear feature extraction. KPCA will be compared with well known linear methods such as correlation, Eigenfaces, and Fisherfaces.

Synthesis And Application Of Novel Chiral Ionic Liquids Derived From Alpha-Pinene, Yun Wang

Theses

Two new chiral ionic liquids of oxazolinium cations derived from a-pinene: 9,9-Dimethyl-4-propenyl-5-propyl-3 -oxa-5-azonia-tricyclo [6.1.1.0 ^2,6] dec-4-ene tetrafluoro borate ([ChIPOZ] [BF₄]) and 9,9-Dimethyl-4-propenyl-5-propyl-3-oxa-5-azonia-tricyclo [6.1.1.0 ^2,6] dec-4-ene hexafluoro phosphate ([ChIPOZ][PF₆]). Both these chiral ionic liquids have been applied in enantiomeric copper-catalyzed 1,4-addition reactions with diethyl zinc. The enantiomeric excess for product using [ChIPOZ][BF₄] is above 70% and for [ChIPOZ][PF₆] is above 30%. Chiral ionic liquids worked as phase transfer catalysts In this reaction.

α-Pinene was used as the "chiral pool" in the synthesis of amino alcohol through a two-step reaction, followed by …

Towards Digital Library Service Integration, Prateek Shrivastava

Theses

Digital Library Service Integration (DLSI) aims to provide a systematic approach in integrating the services and collections of National Science and Digital Library. The National Science and Digital Library collections can share the services among themselves in a totally integrated environinent. Collections as such will require no change to plug into the DLSI architecture. Collections will keep using the services of NSDL in the similar manner as before. These services will in turn pass few parameters to the services of DLSI. With the help of these parameters, wrappers will fetch the details and priority of the users. These wrappers will …

Fresh Kills Dumped : A Policy Assessment For The Management Of New York City's Residential Solid Waste In The Twenty-First Century, Aaron William Comrov

Theses

New York City ceased disposing of its daily residential solid waste output within its municipal borders in March 2001 when the Department of Sanitation completed its phase-down of the Fresh Kills landfill on Staten Island. The closure of this facility has, for the first time in history, stripped New York City of its waste management selfsufficiency, created a situation in which municipal officials are reliant on private firms and other governmental jurisdictions for disposal services, and contributed to deteriorating fiscal, environmental, political, economic, social and practical conditions.

Consequent and concurrent to this predicament, a multitude of alternative policies have been …

An Application In Bioinformatics : A Comparison Of Affymetrix And Compugen Human Genome Microarrays, Milind Misra

Theses

The human genome microarrays from Compugen® and Affymetrix® were compared in the context of the emerging field of computational biology. The two premier database servers for genomic sequence data, the National Center for Biotechnology Information and the European Bioinformatics Institute, were described in detail. The various databases and data mining tools available through these data servers were also discussed. Microarrays were examined from a historical perspective and their main current applications-expression analysis, mutation analysis, and comparative genomic hybridization-were discussed. The two main types of microarrays, cDNA spotted microarrays and high-density spotted microarrays were analyzed by exploring the human genome microarray …

Feedback Algorithm For Switch Location : Analysis Of Complexity And Application To Network Design, Yuriy S. Polyakov

Theses

An accelerated feedback algorithm to solve the single-facility minisum problem is studied with application to designing networks with the star topology. The algorithm, in which the acceleration with respect to the Weiszfeld procedure is achieved by multiplying the current Weiszfeld iterate by an accelerating feedback factor, is shown to converge faster than the accelerating procedures available in the literature. Singularities encountered in the algorithm are discussed in detail. A simple practical exception handling subroutine is developed. Several applications of the algorithm to designing computer networks with the star topology are demonstrated. Applications of the algorithm as a subroutine for multi-switch …

Uber-Claws : Unsupervised Pattern Classification For Multi-Unit Extracellular Neuronal Burst Extraction, Rama Natarajan

Theses

To further an understanding of how a neuronal population generates patterns of rhythmic activity, the temporal dynamics of the group of neurons must be formalized. Essential to this pursuit, is the ability to reliably detect and separate the classes of single-unit neuronal activity from multi-unit extracellular signals recorded in a single channel. This study proposes a unified approach to automatically detect and classify single-unit bursts, and to observe the precise onset and offset of burst activity. Existing approaches to the problem fundamentally depend on the statistics of spike waveform variability, both extrinsic and intrinsic to the neuron. In contrast, the …

The Rationale For Preserving Neighborhood Open Space In Newark, New Jersey's North Ward, Stephen M. Wiessner

Theses

A study was conducted to determine the shifts in open space availability between 1950 and 2003 in four neighborhoods in the North Ward of Newark, New Jersey. Total open space in square feet and open spaces ten thousand square feet and less were quantified to determine the extent of usable open space for the creation of community gardens or vest pocket parks.

The study identified large reductions of open space recently in the two least affluent study areas. The two more affluent study areas have also lost open space recently, but not at the magnitude of the poorer study areas. …

A Method For Developing In-Silico Protein Homologs, Susan Mcclatchy

Theses

Computational methods for identifying and screening the most promising drug receptor candidates in the human genome are of great interest to drug discovery researchers. Successful methods will accurately identify and narrow the field of potential drug receptor candidates. This study details one such method.

The method described here begins with the assumption that novel drug receptors have high sequence similarity to established drug receptors. The similarity search program FASTA3 aligns translated sequences of the human genome to known drug receptor sequences and ranks these alignments by measuring their statistical significance. Query results returned by FASTA3 are assembled into "in-silico proteins" …

Analysis Of Gene Expression Data Using Expressionist 3.1 And Genespring 4.2, Indu Shrivastava

Theses

The purpose of this study was to determine the differences in the gene expression analysis methods of two data mining tools, Expressionistic^TM 3.1 and GeneSpring^TM 4.2 with focus on basic statistical analysis and clustering algorithms. The data for this analysis was derived from the hybridization of Rattus norvegicus RNA to the Affymetrix RG34A GeneChip. This analysis was derived from experiments designed to identify changes in gene expression patterns that were induced in vivo by an experimental treatment.

The tools were found to be comparable with respect to the list of statistically significant genes that were up-regulated by more …

Functional Annotation And Dendrogram Representation Of Gene Expression Clustering Results, Antoneta Petkova Vladimirova

Theses

The advances in genomic sciences have created vast amounts of gene expression data. To make sense of the expression information, various techniques have been applied. Clustering is among the unsupervised methods used to group the results according to gene expression level. Dendrogram visualization allows graphical representation of the clustering. The aim of this thesis is to enhance these techniques by adding another layer of functionality, namely, annotating the dendrogram with gene functional information. Presented is an application which visualizes yeast clustering results as a dendrogram along with color-coded gene keyword annotations. Gene keyword information was extracted from a major biological …

Reconsidering Restoration, Brian Hoffner

Theses

What does the process of ecological restoration actually produce? For some restoring nature is a point of no contention. By replacing ecosystems that have been damaged by human interference, humans are taking proper responsibility for their actions. However, the environmental ethics community is all but in agreement over humans' obligations to damaged ecosystems. Some in the field claim that it is human's responsibility to perform "wild gardening", through restorations, to "our" environments. While other philosophers insist that these acts produce "faked nature".

This thesis offers a compromise vision of the meaning of restoration. The author uses the concept of Autonomous …