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Physical Sciences and Mathematics Commons

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Articles 1 - 4 of 4

Full-Text Articles in Physical Sciences and Mathematics

Ion-Molecule Interactions Enable Unexpected Phase Transitions In Organic-Inorganic Aerosol, David S. Richards, Kristin L. Trobaugh, Josefina Hajek-Herrera, C. L. Price, C. S. Sheldon, J. F. Davies, Ryan D. Davis Nov 2020

Ion-Molecule Interactions Enable Unexpected Phase Transitions In Organic-Inorganic Aerosol, David S. Richards, Kristin L. Trobaugh, Josefina Hajek-Herrera, C. L. Price, C. S. Sheldon, J. F. Davies, Ryan D. Davis

Chemistry Faculty Research

Atmospheric aerosol particles are commonly complex, aqueous organic-inorganic mixtures, and accurately predicting the properties of these particles is essential for air quality and climate projections. The prevailing assumption is that aqueous organic-inorganic aerosols exist predominately with liquid properties and that the hygroscopic inorganic fraction lowers aerosol viscosity relative to the organic fraction alone. Here, in contrast to those assumptions, we demonstrate that increasing inorganic fraction can increase aerosol viscosity (relative to predictions) and enable a humidity-dependent gel phase transition through cooperative ion-molecule interactions that give rise to long-range networks of atmospherically relevant low-mass oxygenated organic molecules (180 to 310 Da) …


Assessing The Efficacy Of Tnf-Alpha Inhibitors In Preventing Emergency And Emergent Colectomies, Ruben Rajan, Matthew W. Trinder, Johnny Lo, Mary Theophilus Jan 2020

Assessing The Efficacy Of Tnf-Alpha Inhibitors In Preventing Emergency And Emergent Colectomies, Ruben Rajan, Matthew W. Trinder, Johnny Lo, Mary Theophilus

Research outputs 2014 to 2021

Background and Aim: Severe ulcerative colitis (UC) is potentially life threatening and is associated with significant morbidity. TNF-∝ inhibitors (Infliximab) were introduced in Australia for the management of medically resistant, acute, severe flares of UC in 2008. The aim of this study is to assess the efficacy of Infliximab in preventing emergent and emergency colectomies for patients with moderate to severe UC by comparing colectomy rates before and after its introduction at our institution. Methods: This was a retrospective cohort study of all patients who were admitted to the Royal Perth Hospital with a flare of UC between 2002 and …


A Novel Method For Detecting Morphologically Similar Crops And Weeds Based On The Combination Of Contour Masks And Filtered Local Binary Pattern Operators, Vi Nguyen Thanh Le, Selam Ahderom, Beniamin Apopei, Kamal Alameh Jan 2020

A Novel Method For Detecting Morphologically Similar Crops And Weeds Based On The Combination Of Contour Masks And Filtered Local Binary Pattern Operators, Vi Nguyen Thanh Le, Selam Ahderom, Beniamin Apopei, Kamal Alameh

Research outputs 2014 to 2021

Background: Weeds are a major cause of low agricultural productivity. Some weeds have morphological features similar to crops, making them difficult to discriminate. Results: We propose a novel method using a combination of filtered features extracted by combined Local Binary Pattern operators and features extracted by plant-leaf contour masks to improve the discrimination rate between broadleaf plants. Opening and closing morphological operators were applied to filter noise in plant images. The images at 4 stages of growth were collected using a testbed system. Mask-based local binary pattern features were combined with filtered features and a coefficient k. The classification of …


“Notame”: Workflow For Non-Targeted Lc-Ms Metabolic Profiling, Anton Klåvus, Marietta Kokla, Stefania Noerman, Ville M. Koistinen, Marjo Tuomainen, Iman Zarei, Topi Meuronen, Merja R. Häkkinen, Soile Rummukainen, Ambrin Farizah Babu, Taisa Sallinen, Olli Karkkainen, Jussi Paananen, David Broadhurst, Carl Brunius, Kati Hanhineva, Hanhineva Jan 2020

“Notame”: Workflow For Non-Targeted Lc-Ms Metabolic Profiling, Anton Klåvus, Marietta Kokla, Stefania Noerman, Ville M. Koistinen, Marjo Tuomainen, Iman Zarei, Topi Meuronen, Merja R. Häkkinen, Soile Rummukainen, Ambrin Farizah Babu, Taisa Sallinen, Olli Karkkainen, Jussi Paananen, David Broadhurst, Carl Brunius, Kati Hanhineva, Hanhineva

Research outputs 2014 to 2021

Metabolomics analysis generates vast arrays of data, necessitating comprehensive workflows involving expertise in analytics, biochemistry and bioinformatics in order to provide coherent and high-quality data that enable discovery of robust and biologically significant metabolic findings. In this protocol article, we introduce notame, an analytical workflow for non-targeted metabolic profiling approaches, utilizing liquid chromatography-mass spectrometry analysis. We provide an overview of lab protocols and statistical methods that we commonly practice for the analysis of nutritional metabolomics data. The paper is divided into three main sections: the first and second sections introducing the background and the study designs available for metabolomics research …