Physical Sciences and Mathematics Commons^™

Modeling The Effects Of Tile Drain Placement On The Hydrologic Function Of Farmed Prairie Wetlands1, Brett Werner, John Tracy, W. Carter Johnson, Richard A. Voldseth, Glenn R. Guntenspergen, Bruce Millett

United States Geological Survey: Staff Publications

The early 2000s saw large increases in agricultural tile drainage in the eastern Dakotas of North America. Agricultural practices that drain wetlands directly are sometimes limited by wetland protection programs. Little is known about the impacts of tile drainage beyond the delineated boundaries of wetlands in upland catchments that may be in agricultural production. A series of experiments were conducted using the well-published model WETLANDSCAPE that revealed the potential for wetlands to have significantly shortened surface water inundation periods and lower mean depths when tile is placed in certain locations beyond the wetland boundary. Under the soil conditions found in …

Groundwater Declines Are Linked To Changes In Great Plains Stream Fish Assemblages, Joshuah S. Perkin, Keith B. Gido, Jeffrey A. Falke, Kurt D. Fausch, Harry Crockett, Eric R. Johnson, John Sanderson

United States Geological Survey: Staff Publications

Groundwater pumping for agriculture is a major driver causing declines of global freshwater ecosystems, yet the ecological consequences for stream fish assemblages are rarely quantified. We combined retrospective (1950–2010) and prospective (2011–2060) modeling approaches within a multiscale framework to predict change in Great Plains stream fish assemblages associated with groundwater pumping from the United States High Plains Aquifer. We modeled the relationship between the length of stream receiving water from the High Plains Aquifer and the occurrence of fishes characteristic of small and large streams in the western Great Plains at a regional scale and for six subwatersheds nested within …

Germination And Growth Of Native And Invasive Plants On Soil Associated With Biological Control Of Tamarisk (Tamarix Spp.), Rebecca A. Sherry, Patrick B. Shafroth, Jayne Belnap, Steven Ostoja, Sasha C. Reed

United States Geological Survey: Staff Publications

Introductions of biocontrol beetles (tamarisk beetles) are causing dieback of exotic tamarisk in riparian zones across the western United States, yet factors that determine plant communities that follow tamarisk dieback are poorly understood. Tamarisk-dominated soils are generally higher in nutrients, organic matter, and salts than nearby soils, and these soil attributes might influence the trajectory of community change. To assess physical and chemical drivers of plant colonization after beetle-induced tamarisk dieback, we conducted separate germination and growth experiments using soil and litter collected beneath defoliated tamarisk trees. Focal species were two common native (red threeawn, sand dropseed) and two common …

A Complex Origin For The Kelso Dunes, Mojave National Preserve, California, Usa: A Case Study Using A Simple Geochemical Method With Global Applications, Daniel R. Muhs, Nicholas Lancaster, Gary L. Skipp

United States Geological Survey: Staff Publications

The Kelso Dune field in southern California is intriguing because although it is of limited areal extent (~100 km2), it has a wide variety of dune forms and contains many active dunes (~40 km2), which is unusual in the Mojave Desert. Studies over the past eight decades have concluded that the dunes are derived primarily from a single source, Mojave River alluvium, under a dominant, westerly-to-northwesterly wind regime. The majority of these studies did not, however, present data to support the Mojave River as the only source.We conducted mineralogical and geochemical studies ofmost of the 14 geomorphically defined dune groups …

Status Of Scientific Knowledge, Recovery Progress, And Future Research Directions For The Gulf Sturgeon, Acipenser Oxyrinchus Desotoi Vladykov, 1955, K.J. Sulak, F. Parauka, W. T. Slack, R. T. Ruth, M. T. Randall, K. Luke, M. E. Price

United States Geological Survey: Staff Publications

The Gulf Sturgeon, Acipenser oxyrinchus desotoi, is an anadromous species of Acipenseridae and native to North America. It currently inhabits and spawns in the upper reaches of seven natal rivers along the northern coast of the Gulf of Mexico from the Suwannee River, Florida, to the Pearl River, Louisiana, during spring to autumn. Next to the Alligator Gar (Atractosteus spatula), the Gulf Sturgeon is currently the largest fish species occurring in U.S. Gulf Coast rivers, attaining a length of 2.35 m and weights exceeding 135 kg, but historically attained a substantially larger size. Historically, the spawning populations existed in additional …

On The Importance Of Stratigraphic Control For Vertebrate Fossil Sites In Channel Islands National Park, California, Usa: Examples From New Mammuthus Finds On San Miguel Island, Jeffrey S. Pigati, Daniel R. Muhs, John P. Mcgeehin

United States Geological Survey: Staff Publications

Quaternary vertebrate fossils, most notably mammoth remains, are relatively common on the northern Channel Islands of California. Well-preserved cranial, dental, and appendicular elements of Mammuthus exilis (pygmy mammoth) and Mammuthus columbi (Columbian mammoth) have been recovered from hundreds of localities on the islands during the past half-century or more. Despite this paleontological wealth, the geologic context of the fossils is described in the published literature only briefly or not at all, which has hampered the interpretation of associated 14C ages and reconstruction of past environmental conditions. We recently discovered a partial tusk, several large bones, and a tooth enamel plate …

An Association Between A Cusk Eel (Bassozetus Sp.) And A Black Coral (Schizopathes Sp.) In The Deep Western Indian Ocean, Andrew R. Gates, Kirsty J. Morris, Daniel O. Jones, Kenneth J. Sulak

United States Geological Survey: Staff Publications

Detailed observations in the deep sea can reveal previously unknown behaviour, species interactions and fine-scale habitat heterogeneity. Here, the first in situ images of the black coral Schizopathes sp. (Anthozoa: Antipatharia) in the deep western Indian Ocean have been obtained from remotely operated vehicle video footage and time-lapse photography. In these images, there appears to be an association with the cusk eel Bassozetus (Family: Ophidiidae). In the primary observation, chance encounters revealed the fish interacted with the anitpatharian on multiple occasions over several days. Subsequent time-lapse camera footage showed the fish remained almost exclusively underneath the antipatharian for the duration …

A Spatio-Temporal Comparison Of Avian Migration Phenology Using Citizen Science Data, Ali Arab, Jason R. Courter, Jessica Zelt

United States Geological Survey: Staff Publications

The effects of climate change have wide-ranging impacts on wildlife species and recent studies indicate that birds’ spring arrival dates are advancing in response to changes in global climates. In this paper, we propose a spatio-temporal approach for comparing avian first arrival data for multiple species. As an example, we analyze spring arrival data for two long-distance migrants (Rubythroated Hummingbird Archilochus colubris; and Purple Martin Progne subis) in eastern North America from 2001–2010 using Citizen Science data. The proposed approach provides researchers with a tool to compare mean arrival dates while accounting for spatial and temporal variability. Our results show …

Concentration Trends For Lead And Calcium-Normalized Lead In Fish Fillets From The Big River, A Mining-Contaminated Stream In Southeastern Missouri Usa, Christopher J. Schmitt, Michael J. Mckee

United States Geological Survey: Staff Publications

Lead (Pb) and calcium (Ca) concentrations were measured in fillet samples of longear sunfish (Lepomis megalotis) and redhorse suckers (Moxostoma spp.) collected in 2005–2012 from the Big River, which drains a historical mining area in southeastern Missouri and where a consumption advisory is in effect due to elevated Pb concentrations in fish. Lead tends to accumulated in Ca-rich tissues such as bone and scale. Concentrations of Pb in fish muscle are typically low, but can become elevated in fillets from Pb-contaminated sites depending in part on how much bone, scale, and skin is included in the sample. We used analysis-of-covariance …

In-Air Hearing Of A Diving Duck: A Comparison Of Psychoacoustic And Auditory Brainstem Response Thresholds, Sara E. Crowell, Alicia M. Wells-Berlin, Ronald E. Therrien, Sally E. Yannuzzi, Catherine E. Carr

United States Geological Survey: Staff Publications

Auditory sensitivity was measured in a species of diving duck that is not often kept in captivity, the lesser scaup. Behavioral (psychoacoustics) and electrophysiological [the auditory brainstem response (ABR)] methods were used to measure in-air auditory sensitivity, and the resulting audiograms were compared. Both approaches yielded audiograms with similar U-shapes and regions of greatest sensitivity (2000-3000 Hz). However, ABR thresholds were higher than psychoacoustic thresholds at all frequencies. This difference was least at the highest frequency tested using both methods (5700 Hz) and greatest at 1000 Hz, where the ABR threshold was 26.8 dB higher than the behavioral measure of …

Coherent Late-Holocene Climate-Driven Shifts In The Structure Of Three Rocky Mountain Lakes, Jeffrey R. Stone, Jasmine E. Saros, Gregory T. Pederson

United States Geological Survey: Staff Publications

Large-scale atmospheric pressure centers, such as the Aleutian and Icelandic Low, have a demonstrated relationship with physical lake characteristics in contemporary monitoring studies, but the responses to these phenomena are rarely observed in lake records. We observe coherent changes in the stratification patterns of three deep (>30 m) lakes inferred from fossil diatom assemblages as a response to shifts in the location and intensity of the Aleutian Low and compare these changes with similar long-term changes observed in the ¹⁸O record from the Yukon. Specifically, these records indicate that between 3.2 and 1.4 ka, the Aleutian Low shifted …

Deep Subsurface Drip Irrigation Using Coal-Bed Sodic Water: Part Ii. Geochemistry, Carleton R. Bern, George N. Breit, Richard W. Healy, John W. Zupancic

United States Geological Survey: Staff Publications

Waters with low salinity and high sodium adsorption ratios (SARs) present a challenge to irrigation because they degrade soil structure and infiltration capacity. In the Powder River Basin of Wyoming, such low salinity (electrical conductivity, EC 2.1 mS cm⁻¹) and high-SAR (54) waters are co-produced with coal-bed methane and some are used for subsurface drip irrigation (SDI). The SDI system studied mixes sulfuric acid with irrigation water and applies water year-round via drip tubing buried 92 cm deep. After six years of irrigation, SAR values between 0 and 30 cm depth (0.5–1.2) are only slightly increased over non-irrigated …

Paying The Pipers: Mitigating The Impact Of Anticoagulant Rodenticides On Predators And Scavengers, John E. Elliott, Barnett A. Rattner, Richard F. Shore, Nico W. Van Den Brink

United States Geological Survey: Staff Publications

Anticoagulant rodenticides, mainly second-generation forms, or SGARs, dominate the global market for rodent control. Introduced in the 1970s to counter genetic resistance in rodent populations to first-generation compounds such as warfarin, SGARs are extremely toxic and highly effective killers. However, their tendency to persist and accumulate in the body has led to the widespread contamination of terrestrial predators and scavengers. Commercial chemicals that are classified by regulators as persistent, bio-accumulative, and toxic (PBT) chemicals and that are widely used with potential environmental release, such as dichloro-diphenyl-trichloroethane (DDT) or polychlorinated biphenyls (PCBs), have been removed from commerce. However, despite consistently failing …

Bioaccessibility Tests Accurately Estimate Bioavailability Of Lead To Quail, W. Nelson Beyer, Nicholas T. Basta, Rufus L. Chaney, Paula F.P. Henry, David E. Mosby, Barnett A. Rattner, Kirk G. Scheckel, Daniel T. Sprague, John S. Weber

United States Geological Survey: Staff Publications

Hazards of soil-borne lead (Pb) to wild birds may be more accurately quantified if the bioavailability of that Pb is known. To better understand the bioavailability of Pb to birds, the authors measured blood Pb concentrations in Japanese quail (Coturnix japonica) fed diets containing Pb-contaminated soils. Relative bioavailabilities were expressed by comparison with blood Pb concentrations in quail fed a Pb acetate reference diet. Diets containing soil from 5 Pb-contaminated Superfund sites had relative bioavailabilities from 33% to 63%, with a mean of approximately 50%. Treatment of 2 of the soils with phosphorus (P) significantly reduced the bioavailability …

Immunoglobulin Detection Inwild Birds: Effectiveness Of Three Secondary Anti-Avian Igy Antibodies In Direct Elisas In 41 Avian Species, Carol A. Fassbinder-Orth, Travis E. Wilcoxen, Tiffany Tran, Raoul K. Boughton, Jeanne M. Fair, Erik K. Hofmeister, Jennifer L. Grindstaff, Jen C. Owen

United States Geological Survey: Staff Publications

1.Immunological reagents for wild, non-model species are limited or often non-existent for many species.

2. In this study, we compare the reactivity of a newanti-passerine IgY secondary antibody with existing secondary antibodies developed for use with birds. Samples from 41 species from the following six avian orders were analysed: Anseriformes (1 family, 1 species), Columbiformes (1 family, 2 species), Galliformes (1 family, 1 species), Passeriformes (16 families, 34 species), Piciformes (1 family, 2 species) and Suliformes (1 family, 1 species). Direct ELISAs were performed to detect total IgY using goat anti-passerine IgY, goat anti-chicken IgY or goat anti-bird IgY secondary …

Processes Contributing To Resilience Of Coastal Wetlands To Sea-Level Rise, Camille L. Stagg, Ken W. Krauss, Donald R. Cahoon, Nicole Cormier, William H. Conner, Christopher M. Swarzenski

United States Geological Survey: Staff Publications

The objectives of this study were to identify processes that contribute to resilience of coastal wetlands subject to rising sea levels and to determine whether the relative contribution of these processes varies across different wetland community types. We assessed the resilience of wetlands to sea-level rise along a transitional gradient from tidal freshwater forested wetland (TFFW) to marsh by measuring processes controlling wetland elevation. We found that, over 5 years of measurement, TFFWs were resilient, although some marginally, and oligohaline marshes exhibited robust resilience to sea-level rise. We identified fundamental differences in how resilience is maintained across wetland community types, …

The Bird Banding Laboratory: Support For And Collaboration With Research At Patuxent, John Tautin

United States Geological Survey: Staff Publications

Located at Patuxent Research Refuge (PRR) and functionally part of the Patuxent Wildlife Research Center (Patuxent), Laurel, MD, the Bird Banding Laboratory (BBL) is the service and administrative center for bird banding in the United States. Over the years, the BBL has been associated with both the PRR and Patuxent, which collectively are commonly referred to by the public (and in this chapter) as “Patuxent.” The BBL issues permits and bands; supplies banding software, instructional materials, and technical advice; coordinates the use of auxiliary markers such as neck collars and radio transmitters; serves as the repository for banding records and …

Endangered Species Research In Hawaii: The Early Years (1965–87), Michael J. Scott, Cameron B. Kepler

United States Geological Survey: Staff Publications

Hawaii is an ecologically isolated archipelago 2,500 miles from the nearest continent. Its isolation resulted in a taxonomically unbalanced flora and fauna with remarkable examples of adaptive radiation among those groups of organisms that won the dispersal sweepstakes. It was one of the last oceanic island groups to be populated by humans, about 900 A.D. by Polynesian travelers and in 1778 by Europeans. Relatively recent colonization by humans did not save it, however, from the biodiversity losses suffered by other isolated archipelagos—it only delayed them (Scott and others, 1988; Pratt and others, 2009a).

Pranked By Audubon: Constantine S. Rafinesque’S Description Of John James Audubon’S Imaginary Kentucky Mammals, Neal Woodman

United States Geological Survey: Staff Publications

The North American naturalist Constantine S. Rafinesque spent much of the year 1818 engaged in a solo journey down the Ohio River Valley to explore parts of what was then the western United States. Along the way, he visited a number of fellow naturalists, and he spent more than a week at the Henderson, Kentucky, home of artist and ornithologist John James Audubon. During the succeeding two years, Rafinesque published descriptions of new species that resulted from his expedition, including eleven species of fishes that eventually proved to have been invented by Audubon as a prank on the credulous naturalist. …

Using Satellite Vegetation And Compound Topographic Indices To Maphighly Erodible Cropland Buffers For Cellulosic Biofuel Cropdevelopments In Eastern Nebraska, Usa, Yingxin Gu, Bruce K. Wylie

United States Geological Survey: Staff Publications

Cultivating annual row crops in high topographic relief waterway buffers has negative environmental effects and can be environmentally unsustainable. Growing perennial grasses such as switchgrass(Panicum virgatum L.) for biomass (e.g., cellulosic biofuel feedstocks) instead of annual row crops in these high relief waterway buffers can improve local environmental conditions (e.g., reduce soil erosion and improve water quality through lower use of fertilizers and pesticides) and ecosystem services (e.g.,minimize drought and flood impacts on production; improve wildlife habitat, plant vigor, and nitro-gen retention due to post-senescence harvest for cellulosic biofuels; and serve as carbon sinks). The main objectives of this …

Chesapeake Bay Fish–Osprey (Pandion Haliaetus) Food Chain: Evaluation Of Contaminant Exposure And Genetic Damage, Rebecca S. Lazarus, Barnett A. Rattner, Peter C. Mcgowan, Robert C. Hale, Natalie K. Karouna-Renier, Richard A. Erickson, Mary Ann Ottinger

United States Geological Survey: Staff Publications

From 2011 to 2013, a large-scale ecotoxicological study was conducted in several Chesapeake Bay (USA) tributaries (Susquehanna River and flats, the Back, Baltimore Harbor/Patapsco Rivers, Anacostia/ middle Potomac, Elizabeth and James Rivers) and Poplar Island as a mid-Bay reference site. Osprey (Pandion haliaetus) diet and the transfer of contaminants from fish to osprey eggs were evaluated. The most bioaccumulative compounds (biomagnification factor>5) included p,p’-dichlorodiphenyldichloroethylene (DDE), total polychlorinated biphenyls (PCBs), total polybrominated diphenyl ethers (PBDEs), and bromodiphenyl ether (BDE) congeners 47, 99, 100, and 154. This analysis suggested that alternative brominated flame retardants and other compounds (methoxytriclosan) are not appreciably …

Evaluating Methods To Establish Habitat Suitability Criteria: A Case Study In The Upper Delaware River Basin, Usa, H. S. Galbraith, C. J. Blakeslee, J. C. Cole, C. A. Talbert, K. O. Maloney

United States Geological Survey: Staff Publications

Defining habitat suitability criteria (HSC) of aquatic biota can be a key component to environmental flow science. HSC can be developed through numerous methods; however, few studies have evaluated the consistency of HSC developed by different methodologies. We directly compared HSC for depth and velocity developed by the Delphi method (expert opinion) and by two primary literature meta-analyses (literature- derived range and interquartile range) to assess whether these independent methods produce analogous criteria for multiple species (rainbow trout, brown trout, American shad, and shallow fast guild) and life stages. We further evaluated how these two independently developed HSC affect calculations …

Elevation Dynamics In A Restored Versus A Submerging Salt Marsh In Long Island Sound, Shimon C. Anisfeld, Troy D. Hill, Daonald R. Cahoon

United States Geological Survey: Staff Publications

Accelerated sea-level rise (SLR) poses the threat of salt marsh submergence, especially in marshes that are relatively low-lying. At the same time, restoration efforts are producing new low-lying marshes, many of which are thriving and avoiding submergence. To understand the causes of these different fates, we studied two Long Island Sound marshes: one that is experiencing submergence and mudflat expansion, and one that is undergoing successful restoration. We examined sedimentation using a variety of methods, each of which captures different time periods and different aspects of marsh elevation change: surface-elevation tables, marker horizons, sediment cores, and sediment traps. We also …

Conserving California Condors In The 1980s, Noel F.R. Snyder

United States Geological Survey: Staff Publications

By the late 1970s, the California condor (Gymnogyps californianus) was in serious trouble, with probably no more than about 30 birds left in existence, all in a mountainous region just north of Los Angeles that is vegetated mainly in chaparral and grasslands. All estimates of population size and trends offered since the early condor studies by Carl Koford in the 1930s and 1940s indicated a continuing decline toward extinction, and it appeared that few years were left before the species would be gone (see Koford, 1953; Wilbur, 1978). Evidently, the conservation steps that had been taken, including the …

Patuxent’S Role In The Development Of The North American Breeding Bird Survey, John R. Sauer

United States Geological Survey: Staff Publications

The North American Breeding Bird Survey (BBS) is a roadside survey of the breeding birds of North America. The BBS provides data from the contiguous United States, Alaska, southern and central Canada, and northern Mexico. Begun in 1966 by Chandler (Chan) S. Robbins at the U.S. Geological Survey (USGS) Patuxent Wildlife Research Center (Patuxent), and now jointly managed by Patuxent, the Canadian Wildlife Service, and the Mexican Commission for the Knowledge and Use of Biodiversity, the survey is conducted primarily in June along more than 5,000 roadside survey routes that are surveyed once each year. Volunteer observers drive the 39.4-kilometer …

Pranked By Audubon: Constantine S. Rafinesque’S Description Of John James Audubon’S Imaginary Kentucky Mammals, Neal Woodman

United States Geological Survey: Staff Publications

The North American naturalist Constantine S. Rafinesque spent much of the year 1818 engaged in a solo journey down the Ohio River Valley to explore parts of what was then the western United States. Along the way, he visited a number of fellow naturalists, and he spent more than a week at the Henderson, Kentucky, home of artist and ornithologist John James Audubon. During the succeeding two years, Rafinesque published descriptions of new species that resulted from his expedition, including eleven species of fishes that eventually proved to have been invented by Audubon as a prank on the credulous naturalist. …

Modeling The Effects Of Tile Drain Placement On The Hydrologic Function Of Farmed Prairie Wetlands1, Brett Werner, John Tracy, W. Carter Johnson, Richard A. Voldseth, Glenn R. Guntenspergen, Bruce Millett

United States Geological Survey: Staff Publications

The early 2000s saw large increases in agricultural tile drainage in the eastern Dakotas of North America. Agricultural practices that drain wetlands directly are sometimes limited by wetland protection pro- grams. Little is known about the impacts of tile drainage beyond the delineated boundaries of wetlands in upland catchments that may be in agricultural production. A series of experiments were conducted using the well-published model WETLANDSCAPE that revealed the potential for wetlands to have significantly shortened surface water inundation periods and lower mean depths when tile is placed in certain locations beyond the wet- land boundary. Under the soil conditions …

Phosphorus Retention In A Lowland Neotropical Stream Following An Eight-Year Enrichment Experiment, Gaston E. Small, Marcelo Ardón, John H. Duff, Alan P. Jackman, Alonso Ramírez, Frank J. Triska, Catherine M. Pringle

United States Geological Survey: Staff Publications

Human alteration of the global P cycle has led to widespread P loading in freshwater ecosystems. Much research has been devoted to the capacity of wetlands and lakes to serve as long-term sinks for P inputs from the watershed, but we know much less about the potential of headwater streams to serve in this role. We assessed storage and retention of P in biotic and abiotic compartments after an 8-y experimental P addition to a 1st-order stream in a Neotropical wet forest. Sediment P extractions indicated that nearly all P storage was in the form of Fe- and Al-bound P …

Mapping Marginal Croplands Suitable For Cellulosic Feedstock Crops In The Great Plains, United States, Yingxin Gu, Bruce K. Wylie

United States Geological Survey: Staff Publications

Growing cellulosic feedstock crops (e.g., switchgrass) for biofuel is more environmentally sustainable than cornbased ethanol. Specifically, this practice can reduce soil erosion and water quality impairment from pesticides and fertilizer, improve ecosystem services and sustainability (e.g., serve as carbon sinks), and minimize impacts on global food supplies. The main goal of this study was to identify high-risk marginal croplands that are potentially suitable for growing cellulosic feedstock crops (e.g., switchgrass) in the US Great Plains (GP). Satellitederived growing season Normalized Difference Vegetation Index, a switchgrass biomass productivity map obtained from a previous study, US Geological Survey (USGS) irrigation and crop …

Evaluating Land Cover Influences On Model Uncertainties—A Case Study Of Cropland Carbon Dynamics In The Mid-Continent Intensive Campaign Region, Zhengpeng Li, Shuguang Liu, Xuesong Zhang, Tristram O. West, Stephen M. Ogle, Naijun Zhou

United States Geological Survey: Staff Publications

tQuantifying spatial and temporal patterns of carbon sources and sinks and their uncertainties acrossagriculture-dominated areas remains challenging for understanding regional carbon cycles. Character-istics of local land cover inputs could impact the regional carbon estimates but the effect has not beenfully evaluated in the past. Within the North American Carbon Program Mid-Continent Intensive (MCI)Campaign, three models were developed to estimate carbon fluxes on croplands: an inventory-basedmodel, the Environmental Policy Integrated Climate (EPIC) model, and the General Ensemble biogeo-chemical Modeling System (GEMS) model. They all provided estimates of three major carbon fluxes oncropland: net primary production (NPP), net ecosystem production (NEP), and …