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Full-Text Articles in Physical Sciences and Mathematics
Rnase L-Independent Specific 28s Rrna Cleavage In Murine Coronavirus-Infected Cells, Sangeeta Banerjee, Sungwhan An, Aimin Zhou, Robert H. Silverman, Shinji Makino
Rnase L-Independent Specific 28s Rrna Cleavage In Murine Coronavirus-Infected Cells, Sangeeta Banerjee, Sungwhan An, Aimin Zhou, Robert H. Silverman, Shinji Makino
Chemistry Faculty Publications
We characterized a novel 28S rRNA cleavage in cells infected with the murine coronavirus mouse hepatitis virus (MHV). The 28S rRNA cleavage occurred as early as 4 h postinfection (p.i.) in MHV-infected DBT cells, with the appearance of subsequent cleavage products and a decrease in the amount of intact 28S rRNA with increasing times of infection; almost all of the intact 28S rRNA disappeared by 24 h p.i. In contrast, no specific 18S rRNA cleavage was detected in infected cells. MHV-induced 28S rRNA cleavage was detected in all MHV-susceptible cell lines and all MHV strains tested. MHV replication was required …
Design And Characterization Of A Synthetic Electron-Transfer Protein, Anna Y. Kornilova, James F. Wishart, Wenzhong Xiao, Robin C. Lasey, Anna Fedorova, Yeon-Kyun Shin, Michael Y. Ogawa
Design And Characterization Of A Synthetic Electron-Transfer Protein, Anna Y. Kornilova, James F. Wishart, Wenzhong Xiao, Robin C. Lasey, Anna Fedorova, Yeon-Kyun Shin, Michael Y. Ogawa
Chemistry Faculty Publications
A 30-residue polypeptide [H21(30-mer)] with the sequence Ac-K(IEALEGK)(2)(IEALEHK)-(IEALEGK)G-NH2 was synthesized. The circular dichroism (CD) spectrum of the peptide shows minima at 208 and 222 nm and theta(222)/theta(208) = 1.06, which indicates the formation of a self-assembled coiled-coil when dissolved in aqueous solution. The concentration dependence of the CD data can be fit to an expression that describes a two-state monomer-dimer equilibrium for the apopeptide (K-d = 1.5 +/- 0.4 mu M and theta(max) = -23 800 +/- 130 deg cm(2) dmol(-1)), showing that it has a maximum helicity of 69%. A [MTSL-C21(30-mer)] dimer was also prepared in which MTSL is …
Synthesis And Antimalarial Activity Of Sixteen Dispiro-1,2,4,5-Tetraoxanes: Alkyl-Substituted 7,8,15,16-Tetraoxadispiro[5.2.5.2]Hexadecanes, Jonathan L. Vennerstrom, Yuxiang Dong, Walter Reed Army Institute Of Research, Arba L. Ager Jr., Hong-Ning Fu, Sheri M. Walters, James K. Wood, Geoffrey Edwards, Alexandra D. Holme, W. Graham Mclean
Synthesis And Antimalarial Activity Of Sixteen Dispiro-1,2,4,5-Tetraoxanes: Alkyl-Substituted 7,8,15,16-Tetraoxadispiro[5.2.5.2]Hexadecanes, Jonathan L. Vennerstrom, Yuxiang Dong, Walter Reed Army Institute Of Research, Arba L. Ager Jr., Hong-Ning Fu, Sheri M. Walters, James K. Wood, Geoffrey Edwards, Alexandra D. Holme, W. Graham Mclean
Chemistry Faculty Publications
Sixteen alkyl-substituted dispiro-1,2,4,5-tetraoxanes (7,8,15,16-tetraoxadispiro[5.2.5.2]hexadecanes) were synthesized to explore dispiro-1,2,4,5-tetraoxane SAR and to identify tetraoxanes with better oral antimalarial activity than prototype tetraoxane 1 (WR 148999). The tetraoxanes were prepared either by peroxidation of the corresponding cyclohexanone derivatives in H2-SO4/CH3CN or by ozonolysis of the corresponding cyclohexanone methyl oximes. Those tetraoxanes with alkyl substituents at the 1 and 10 positions were formed as single stereoisomers, whereas the five tetraoxanes formed without the stereochemical control provided by alkyl groups at the 1 and 10 positions were isolated as mixtures of diastereomers. Three of the sixteen …
Spectroscopy Of Hydrogen-Bonded Formanilide Clusters In A Supersonic Jet: Solvation Of A Model Trans Amide, A. V. Fedorov, John R. Cable
Spectroscopy Of Hydrogen-Bonded Formanilide Clusters In A Supersonic Jet: Solvation Of A Model Trans Amide, A. V. Fedorov, John R. Cable
Chemistry Faculty Publications
The gas-phase structures of trans-formanilide (FA) clusters containing varying numbers of water and ammonia molecules have been investigated by resonant two-photon ionization spectroscopy in a supersonic jet expansion. A single structure is found for the 1:1 cluster of FA with ammonia in which the amide NH group functions as a hydrogen bond donor to the ammonia nitrogen. In contrast, vibronically resolved spectra reveal two distinct structures for the 1:1 cluster with water in which either the amide NH group functions as a hydrogen bond donor or the carbonyl oxygen functions as a hydrogen bond acceptor. The 1:1 clusters with both …
Visual Test Using Color Frequency Doubling, Scott Whittenburg
Visual Test Using Color Frequency Doubling, Scott Whittenburg
Chemistry Faculty Publications
A novel psychophysical visual test is proposed for testing a person for glaucoma, and based on the discovery that a frequency doubling phenomenon is produced by isoluminent color visual stimuli. More specifically, it is proposed to construct a visual stimulus for which alternating colors in a grating pattern is the only basis for producing the frequency doubling phenomenon. That is, the colors are of the same luminance or intensity level, i.e., isoluminent, but each grating or pattern alternates from one color to another. Preferably, the colors are complementary color pairs, such as blue and yellow.
The Nonplanarity Of The Peptide Group: Molecular Dynamics Simulations, Steven W. Rick
The Nonplanarity Of The Peptide Group: Molecular Dynamics Simulations, Steven W. Rick
Chemistry Faculty Publications
The general properties of the peptide bond can be described from a linear combination of two states: a single bond neutral form and a double bond zwitterionic form. However, environmental effects can shift the balance of the linear combination. This would cause the rigidity of torsional rotations of the peptide bond to be environmentally dependent and, in fact, an analysis of protein structures in the protein data bank reveals a different degree of nonplanarity for different secondary structure elements. A potential is presented in which the peptide bond is treated as a linear combination of two states; the coefficients of …
Methyl-Substituted Dispiro-1,2,4,5-Tetraoxanes: Correlations Of Structural Studies With Antimalarial Activity, Kevin J. Mccollough, James K. Wood, Walter Reed Army Institute Of Research, Yuxiang Dong, Jonathan L. Vennerstrom
Methyl-Substituted Dispiro-1,2,4,5-Tetraoxanes: Correlations Of Structural Studies With Antimalarial Activity, Kevin J. Mccollough, James K. Wood, Walter Reed Army Institute Of Research, Yuxiang Dong, Jonathan L. Vennerstrom
Chemistry Faculty Publications
Two tetramethyl-substituted dispiro-1,2,4,5-tetraoxanes (7,8,15,16-tetraoxadispiro[5.2.5.2]- hexadecanes) 3 and 4 were designed as metabolically stable analogues of the dimethylsubstituted dispiro-1,2,4,5-tetraoxane prototype WR 148999 (2). For a positive control we selected the sterically unhindered tetraoxane 5 (7,8,15,16-tetraoxadispiro[5.2.5.2]hexadecane), devoid of any substituents. Tetraoxanes 3 and 4 were completely inactive in contrast to tetraoxanes 2 and 5. We hypothesize that the two inactive tetraoxanes possess sufficient steric hindrance about the tetraoxane ring due to the two additional axial methyl groups to prevent their activation to presumed parasiticidal carbon radicals by inhibiting electron transfer from heme or other iron(II) species. For each of the tetraoxanes 2-4, …
9-Phenyl-3,4,4a,9a-Tetrahydrotriptycene And 9-Phenyl-1,2,3,4,4a,9a-Hexahydrotriptycene, John Masnovi, Shaoming Duan, Ronald J. Baker
9-Phenyl-3,4,4a,9a-Tetrahydrotriptycene And 9-Phenyl-1,2,3,4,4a,9a-Hexahydrotriptycene, John Masnovi, Shaoming Duan, Ronald J. Baker
Chemistry Faculty Publications
The structure of 9-phenyl-3,4,4a,9a-tetrahydrotriptycene, C26H22, (I), exhibits regiochemistry consistent with a stepwise mechanism for its formation from photocycloaddition of 1,3- cyclohexadiene and 9-phenylanthracene. Bond distances involving the bridgehead C atoms are similar in (I) and the hydrogenated derivative, 9-phenyl-1,2,3,4,4a,9a-hexahydrotriptycene, C26H24, (II), with bonds to the quaternary-C atoms exhibiting significant elongation [1.581 (2) A Ê in (I) and 1.585 (2) A Ê in (II)]. The molecular geometry precludes significant overlap between the phenyl groups and the interannular bonds in both compounds, indicating that the origin of the bond lengthening is steric in nature.
Atomization Enthalpies And Enthalpies Of Formation Of The Germanium Clusters, Ge5, Ge6, Ge7, And Ge8 By Knudsen Effusion Mass Spectrometry, Karl A. Gingerich, R W. Schmude, M Sai Baba, Giovanni Meloni
Atomization Enthalpies And Enthalpies Of Formation Of The Germanium Clusters, Ge5, Ge6, Ge7, And Ge8 By Knudsen Effusion Mass Spectrometry, Karl A. Gingerich, R W. Schmude, M Sai Baba, Giovanni Meloni
Chemistry Faculty Publications
The high-temperature mass spectrometric method was employed to measure the equilibrium partial pressures of small germanium clusters above liquid germanium contained in a graphite Knudsen cell. These data were combined with new thermal functions, calculated from recent theoretical and spectroscopic molecular parameters, to evaluate the atomization enthalpies and enthalpies of formation of Ge[sub 5]-Ge[sub 8]. Mass spectrometric equilibrium data available in literature were also reevaluated. The following atomization enthalpies, Δ[sub a]H[sub 0][sup o](Ge[sub n],g) and enthalpies of formation Δ[sub f]H[sub 298.15][sup o](Ge[sub n],g), in kJ mol-1, have been obtained: Ge[sub 5], 1313±27 and 548±27, Ge[sub 6], 1649±33 and 583±33, Ge[sub …
Thermodynamic Stability Of Sn4, Sn5, Sn6, And Sn7 Clusters By Knudsen Cell Mass Spectrometry, Giovanni Meloni, R W. Schmude, J E. Kingcade, Karl A. Gingerich
Thermodynamic Stability Of Sn4, Sn5, Sn6, And Sn7 Clusters By Knudsen Cell Mass Spectrometry, Giovanni Meloni, R W. Schmude, J E. Kingcade, Karl A. Gingerich
Chemistry Faculty Publications
The Knudsen cell mass spectrometric method has been employed to measure the partial pressures of Sn[sub n] (n=1-7) under equilibrium conditions above liquid tin or a tin-gold alloy, contained in a graphite Knudsen cell. From the all-gas analyzed equilibria the following atomization enthalpies Δ[sub a]H[sub 0][sup °](Sn[sub n]), and enthalpies of formation, Δ[sub f]H[sub 298.15][sup °](Sn[sub n]), in kJ mol-1, have been obtained: Sn[sub 4], 750.2±14 and 450.6±14; Sn[sub 5], 990.2±22 and 512.3±22; Sn[sub 6], 1349.7±28 and 452.8±28; Sn[sub 7], 1644.2±37 and 460.0±37. The atomization energies are compared with available …
Knudsen Cell Mass Spectrometric Investigation Of The B2n Molecule, Giovanni Meloni, M Sai Baba, Karl A. Gingerich
Knudsen Cell Mass Spectrometric Investigation Of The B2n Molecule, Giovanni Meloni, M Sai Baba, Karl A. Gingerich
Chemistry Faculty Publications
High-temperature Knudsen cell mass spectrometry has been used to study the equilibria involving the B2Nmolecule over the Si–BN system. Thermal functions needed in the evaluation of the mass spectrometric equilibrium data have been calculated from available experimental and theoretical molecular parameters. The enthalpy changes for the reactions2B(g)+Si2N(g)=B2N(g)+2Si(g),and BN(s)+B(g)=B2N(g)have been measured. The following atomization enthalpy,ΔaHo0,and enthalpy of formation,ΔfHo298.15,in kJ mol−1, of1045.5±18 and551.3±18 for theB2N molecule have been determined from these reactionenthalpies. Atomization energies of similar molecules have been compared and discussed.
Thermodynamic Study Of The Gaseous Molecules Al2n, Aln, And Al2n2 By Knudsen Cell Mass Spectrometry, Giovanni Meloni, Karl A. Gingerich
Thermodynamic Study Of The Gaseous Molecules Al2n, Aln, And Al2n2 By Knudsen Cell Mass Spectrometry, Giovanni Meloni, Karl A. Gingerich
Chemistry Faculty Publications
The Knudsen effusion mass spectrometric method has been employed to measure the equilibrium partial pressures of the Al2N molecule over the AlN–Au–graphite system. Theoretical computations were carried out to determine the structure, molecular parameters, and thermodynamic properties of Al2N. The partial pressures have been combined with the calculated thermal functions to determine the atomization enthalpy,ΔaHo0, and enthalpy of formation,ΔfHo298.15, in kJ mol−1, of 783.2±15 and 342.7±15 for Al2N, respectively. Upper values for the dissociation energy of AlN, Do0(AlN,g)⩽368±15 kJ mol−1, and for the atomization enthalpy of Al2N2, ΔaHo0(Al2N2,g)⩽1402 kJ mol−1 have been obtained. These results are discussed and …
Characterization Of Chimeric Lipopolysaccharides From Escherichia Coli Strain Jm109 Transformed With Lipooligosaccharide Synthesis Genes (Lsg) From Haemophilus Influenzae, Nancy J. Phillips, T. J. Miller, J. J. Engstrom, William Melaugh, R. Mclaughlin, M A. Apicella, B W. Gibson
Characterization Of Chimeric Lipopolysaccharides From Escherichia Coli Strain Jm109 Transformed With Lipooligosaccharide Synthesis Genes (Lsg) From Haemophilus Influenzae, Nancy J. Phillips, T. J. Miller, J. J. Engstrom, William Melaugh, R. Mclaughlin, M A. Apicella, B W. Gibson
Chemistry Faculty Publications
Previously, we reported the expression of chimeric lipopolysaccharides (LPS) in Escherichia coli strain JM109 (a K-12 strain) transformed with plasmids containing Haemophilus influenzae lipooligosaccharide synthesis genes (lsg) (Abu Kwaik, Y., McLaughlin, R. E., Apicella, M. A., and Spinola, S. M. (1991) Mol. Microbiol. 5, 2475–2480). In this current study, we have analyzed the O-deacylated LPS and free oligosaccharides from three transformants (designated pGEMLOS-4, pGEMLOS- 5, and pGEMLOS-7) by matrix-assisted laser desorption ionization, electrospray ionization, and tandem mass spectrometry techniques, along with composition and linkage analyses. These data show that the chimeric LPS consist of the complete E. coli LPS core …
Activation Of P38 Mitogen-Activated Protein Kinase And C-Jun Nh2-Terminal Kinase By Double-Stranded Rna And Encephalomyocarditis Virus: Involvement Of Rnase L, Protein Kinase R, And Alternative Pathways, Mihail S. Iordanov, Jayashree M. Paranjape, Aimin Zhou, John Wong, Bryan R.G. Williams, Eliane F. Meurs, Robert H. Silverman, Bruce E. Magun
Activation Of P38 Mitogen-Activated Protein Kinase And C-Jun Nh2-Terminal Kinase By Double-Stranded Rna And Encephalomyocarditis Virus: Involvement Of Rnase L, Protein Kinase R, And Alternative Pathways, Mihail S. Iordanov, Jayashree M. Paranjape, Aimin Zhou, John Wong, Bryan R.G. Williams, Eliane F. Meurs, Robert H. Silverman, Bruce E. Magun
Chemistry Faculty Publications
Double-stranded RNA (dsRNA) accumulates in virus-infected mammalian cells and signals the activation of host defense pathways of the interferon system. We describe here a novel form of dsRNA-triggered signaling that leads to the stimulation of the p38 mitogen-activated protein kinase (p38 MAPK) and the c-Jun NH2-terminal kinase (JNK) and of their respective activators MKK3/6 and SEK1/MKK4. The dsRNA-dependent signaling to p38 MAPK was largely intact in cells lacking both RNase L and the dsRNA-activated protein kinase (PKR), i.e., the two best-characterized mediators of dsRNA-triggered antiviral responses. In contrast, activation of both MKK4 and JNK by dsRNA was greatly reduced in …