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The University of Maine

Series

2019

Articles 1 - 25 of 25

Full-Text Articles in Physical Sciences and Mathematics

Algorithm To Derive Inherent Optical Properties From Remote Sensing Reflectance In Turbid And Eutrophic Lakes, Kun Xue, Emmanuel Boss, Ronghua Ma, Ming Shen Nov 2019

Algorithm To Derive Inherent Optical Properties From Remote Sensing Reflectance In Turbid And Eutrophic Lakes, Kun Xue, Emmanuel Boss, Ronghua Ma, Ming Shen

Marine Sciences Faculty Scholarship

Inherent optical properties play an important role in understanding the biogeochemical processes of lakes by providing proxies for a variety of biogeochemical quantities, including phytoplankton pigments. However, to date, it has been difficult to accurately derive the absorption coefficient of phytoplankton [aph(λ)] in turbid and eutrophic waters from remote sensing. A large dataset of remote sensing of reflectance [ Rrs (λ)] and absorption coefficients was measured for samples collected from lakes in the middle and lower reaches of the Yangtze River and Huai River basin (MLYHR), China. In the process of scattering correction of spectrophotometric measurements, the particulate absorption coefficients …

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Evaluating Satellite Estimates Of Particulate Backscatter In The Global Open Ocean Using Autonomous Profiling Floats, K. M. Bisson, E. Boss, T. K. Westberry, M. J. Behrenfeld Oct 2019

Evaluating Satellite Estimates Of Particulate Backscatter In The Global Open Ocean Using Autonomous Profiling Floats, K. M. Bisson, E. Boss, T. K. Westberry, M. J. Behrenfeld

Marine Sciences Faculty Scholarship

Satellite retrievals of particulate backscattering (bbp) are widely used in studies of ocean ecology and biogeochemistry, but have been historically difficult to validate due to the paucity of available ship-based comparative field measurements. Here we present a comparison of satellite and in situ bbp using observations from autonomous floats (n = 2,486 total matchups across three satellites), which provide bbp at 700 nm. With these data, we quantify how well the three inversion products currently distributed by NASA ocean color retrieve bbp. We find that the median ratio of satellite derived bbp to float bbp ranges from 0.77 to 1.60 …

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Factors Driving The Seasonal And Hourly Variability Of Sea-Spray Aerosol Number In The North Atlantic, Georges Saliba, Chia Li Chen, Savannah Lewis, Lynn M. Russell, Laura Helena Rivellini, Alex K.Y. Lee, Patricia K. Quinn, Timothy S. Bates, Nils Haëntjens, Emmanuel S. Boss, Lee Karp-Boss, Nicholas Baetge, Craig A. Carlson, Michael J. Behrenfeld Oct 2019

Factors Driving The Seasonal And Hourly Variability Of Sea-Spray Aerosol Number In The North Atlantic, Georges Saliba, Chia Li Chen, Savannah Lewis, Lynn M. Russell, Laura Helena Rivellini, Alex K.Y. Lee, Patricia K. Quinn, Timothy S. Bates, Nils Haëntjens, Emmanuel S. Boss, Lee Karp-Boss, Nicholas Baetge, Craig A. Carlson, Michael J. Behrenfeld

Marine Sciences Faculty Scholarship

Four North Atlantic Aerosol and Marine Ecosystems Study (NAAMES) field campaigns from winter 2015 through spring 2018 sampled an extensive set of oceanographic and atmospheric parameters during the annual phytoplankton bloom cycle. This unique dataset provides four seasons of open-ocean observations of wind speed, sea surface temperature (SST), seawater particle attenuation at 660 nm (cp,660, a measure of ocean particulate organic carbon), bacterial production rates, and sea-spray aerosol size distributions and number concentrations (NSSA). The NAAMES measurements show moderate to strong correlations (0.56 < R < 0.70) between NSSA and local wind speeds in the marine boundary layer on hourly timescales, but this relationship weakens in the campaign averages that represent each season, in part because of the reduction in range of wind speed by multiday averaging. NSSA correlates weakly with seawater cp,660 (R = 0.36, P << 0.01), but the correlation with cp,660, is improved (R = 0.51, P < 0.05) for periods of low wind speeds. In addition, NAAMES measurements provide observational dependence of SSA mode diameter (dm) on SST, with dm increasing to larger sizes at higher SST (R = 0.60, P << 0.01) on hourly timescales. These results imply that climate models using bimodal SSA parameterizations to wind speed rather than a single SSA mode that varies with SST may overestimate SSA number concentrations (hence cloud condensation nuclei) by a factor of 4 to 7 and may underestimate SSA scattering (hence direct radiative effects) by a factor of 2 to 5, in addition to overpredicting variability in SSA scattering from wind speed by a factor of 5.

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A Review Of Protocols For Fiducial Reference Measurements Of Water-Leaving Radiance For Validation Of Satellite Remote-Sensing Data Over Water, Kevin G. Ruddick, Kenneth Voss, Emmanuel Boss, Alexandre Castagna, Robert Frouin, Alex Gilerson, Martin Hieronymi, B. Carol Johnson, Joel Kuusk, Zhongping Lee, Michael Ondrusek, Viktor Vabson, Riho Vendt Oct 2019

A Review Of Protocols For Fiducial Reference Measurements Of Water-Leaving Radiance For Validation Of Satellite Remote-Sensing Data Over Water, Kevin G. Ruddick, Kenneth Voss, Emmanuel Boss, Alexandre Castagna, Robert Frouin, Alex Gilerson, Martin Hieronymi, B. Carol Johnson, Joel Kuusk, Zhongping Lee, Michael Ondrusek, Viktor Vabson, Riho Vendt

Marine Sciences Faculty Scholarship

© 2019 by the authors. This paper reviews the state of the art of protocols for measurement of water-leaving radiance in the context of fiducial reference measurements (FRM) of water reflectance for satellite validation. Measurement of water reflectance requires the measurement of water-leaving radiance and downwelling irradiance just above water. For the former there are four generic families of method, based on: (1) underwater radiometry at fixed depths; or (2) underwater radiometry with vertical profiling; or (3) above-water radiometry with skyglint correction; or (4) on-water radiometry with skylight blocked. Each method is described generically in the FRM context with reference …

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A Review Of Protocols For Fiducial Reference Measurements Of Downwelling Irradiance For The Validation Of Satellite Remote Sensing Data Over Water, Kevin G. Ruddick, Kenneth Voss, Andrew C. Banks, Emmanuel Boss, Alexandre Castagna, Robert Frouin, Martin Hieronymi, Cedric Jamet, B. Carol Johnson, Joel Kuusk, Zhongping Lee, Michael Ondrusek, Viktor Vabson, Riho Vendt Aug 2019

A Review Of Protocols For Fiducial Reference Measurements Of Downwelling Irradiance For The Validation Of Satellite Remote Sensing Data Over Water, Kevin G. Ruddick, Kenneth Voss, Andrew C. Banks, Emmanuel Boss, Alexandre Castagna, Robert Frouin, Martin Hieronymi, Cedric Jamet, B. Carol Johnson, Joel Kuusk, Zhongping Lee, Michael Ondrusek, Viktor Vabson, Riho Vendt

Marine Sciences Faculty Scholarship

This paper reviews the state of the art of protocols for the measurement of downwelling irradiance in the context of Fiducial Reference Measurements (FRM) of water reflectance for satellite validation. The measurement of water reflectance requires the measurement of water-leaving radiance and downwelling irradiance just above water. For the latter, there are four generic families of method, using: (1) an above-water upward-pointing irradiance sensor; (2) an above-water downward-pointing radiance sensor and a reflective plaque; (3) a Sun-pointing radiance sensor (sunphotometer); or (4) an underwater upward-pointing irradiance sensor deployed at different depths. Each method-except for the fourth, which is considered obsolete …

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Effect Of Hydroculture Methods On Tomato Root Morphology And Anatomy, Lia Maclellan Aug 2019

Effect Of Hydroculture Methods On Tomato Root Morphology And Anatomy, Lia Maclellan

Honors College

Three methods of hydroculture were compared for their effects on the root anatomy and morphology of tomato (Solanum lycopersicum cv. Defiant). A hydroponic deep water culture method, an ebb-flood system using expanded clay pellets as a solid medium and an aeroponic sub-mist system were compared, with a solid peat/perlite medium for control. The treatments were found to have significant effects on plant root and shoot length, as well as root and shoot biomass. Root morphology was visually distinct among treatments, and all methods of hydroculture were associated with a significant increase in vascular tissue in plant roots compared with the …

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Investigating Ions’ Effects On The Fluorescent Protein Dendra2, Benjamin Waterman Aug 2019

Investigating Ions’ Effects On The Fluorescent Protein Dendra2, Benjamin Waterman

Honors College

While superresolution microscopy has opened the doors to insights into biological phenomena we couldn’t have dreamed of in the last century, its methodology is naturally limited. We aim to push the envelope of its capabilities by testing the effect that Ca2+ and H+ ions have on the fluorescent protein Dendra2. Utilizing a newly designed perfusion chamber, we flow separate solutions containing Ca2+ and H+ ions into a cellular environment, in which the cells in question have been tagged with Dendra2. Utilizing the superresolution technique known as Spectral Fluorescence Photoactivation Localization Microscopy, we are able to obtain information about the emission …

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Understanding Volume Transport In The Jordan River: An Application Of The Navier-Stokes Equations, Gwyneth E. Roberts Aug 2019

Understanding Volume Transport In The Jordan River: An Application Of The Navier-Stokes Equations, Gwyneth E. Roberts

Honors College

This study aims to characterize the circulation patterns in short and narrow estuarine systems on various temporal scales to identify the controls of material transport. In order to achieve this goal, a combination of in situ collected data and analytical modeling was used. The model is based on the horizontal Reynolds Averaged Navier-Stokes equations in the shallow water limit with scaling parameters defined from the characteristics of the estuary. The in situ measurements were used to inform a case study, seeking to understand water level variations and tidal current velocity patterns in the Jordan River and to improve understanding of …

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Interglacial Expansion Of Alpine Glaciers In Garwood Valley, Antarctica, Laura Mattas Aug 2019

Interglacial Expansion Of Alpine Glaciers In Garwood Valley, Antarctica, Laura Mattas

Honors College

It is important to understand the response of the Antarctic Ice Sheet (AIS) to ongoing global atmospheric and oceanic warming to anticipate future sea-level change. There are several contrasting views in this regard. Harig and Simons (2015) concur with the IPCC (2013) conclusion that, in recent decades, outflow across the peripheral grounding lines of the ice sheet has exceeded increased accumulation on the interior surface of the ice sheet. In contrast, Zwally et al. (2015) suggest that recent surface accumulation in the interior East and West Antarctica has outpaced peripheral losses. They further suggest that this recent positive imbalance adds …

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Predictive Diagnostic Analysis Of Mammographic Breast Tissue Microenvironment, Dexter G. Canning Aug 2019

Predictive Diagnostic Analysis Of Mammographic Breast Tissue Microenvironment, Dexter G. Canning

Honors College

Improving computer-aided early detection techniques for breast cancer is paramount because current technology has high false positive rates. Existing methods have led to a substantial number of false diagnostics, which lead to stress, unnecessary biopsies, and an added financial burden to the health care system. In order to augment early detection methodology, one must understand the breast microenvironment. The CompuMAINE Lab has researched computational metrics on mammograms based on an image analysis technique called the Wavelet Transform Modulus Maxima (WTMM) method to identify the fractal and roughness signature from mammograms. The WTMM method was used to color code the mammograms …

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Atmospheric Correction Of Satellite Ocean-Color Imagery During The Pace Era, Robert J. Frouin, Bryan A. Franz, Amir Ibrahim, Kirk Knobelspiesse, Ziauddin Ahmad, Brian Cairns, Jacek Chowdhary, Heidi M. Dierssen, Jing Tan, Oleg Dubovik, Xin Huang, Anthony B. Davis, Olga Kalashnikova, David R. Thompson, Lorraine A. Remer, Emmanuel Boss, Odele Coddington, Pierre Yves Deschamps, Bo Cai Gao, Lydwine Gross, Otto Hasekamp, Ali Omar, Bruno Pelletier, Didier Ramon, François Steinmetz, Peng Wang Zhai Jul 2019

Atmospheric Correction Of Satellite Ocean-Color Imagery During The Pace Era, Robert J. Frouin, Bryan A. Franz, Amir Ibrahim, Kirk Knobelspiesse, Ziauddin Ahmad, Brian Cairns, Jacek Chowdhary, Heidi M. Dierssen, Jing Tan, Oleg Dubovik, Xin Huang, Anthony B. Davis, Olga Kalashnikova, David R. Thompson, Lorraine A. Remer, Emmanuel Boss, Odele Coddington, Pierre Yves Deschamps, Bo Cai Gao, Lydwine Gross, Otto Hasekamp, Ali Omar, Bruno Pelletier, Didier Ramon, François Steinmetz, Peng Wang Zhai

Marine Sciences Faculty Scholarship

The Plankton, Aerosol, Cloud, ocean Ecosystem (PACE) mission will carry into space the Ocean Color Instrument (OCI), a spectrometer measuring at 5 nm spectral resolution in the ultraviolet (UV) to near infrared (NIR) with additional spectral bands in the shortwave infrared (SWIR), and two multi-angle polarimeters that will overlap the OCI spectral range and spatial coverage, i. e., the Spectrometer for Planetary Exploration (SPEXone) and the Hyper-Angular Rainbow Polarimeter (HARP2). These instruments, especially when used in synergy, have great potential for improving estimates of water reflectance in the post Earth Observing System (EOS) era. Extending the top-of-atmosphere (TOA) observations to …

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Retrieving Aerosol Characteristics From The Pace Mission, Part 1: Ocean Color Instrument, Lorraine A. Remer, Anthony B. Davis, Shana Mattoo, Robert C. Levy, Olga V. Kalashnikova, Odele Coddington, Jacek Chowdhary, Kirk Knobelspiesse, Xiaoguang Xu, Ziauddin Ahmad, Emmanuel Boss, Brian Cairns, Heidi M. Dierssen, David J. Diner, Bryan Franz, Robert Frouin, Bo Cai Gao, Amir Ibrahim, J. Vanderlei Martins, Ali H. Omar, Omar Torres, Feng Xu, Peng Wang Zhai Jul 2019

Retrieving Aerosol Characteristics From The Pace Mission, Part 1: Ocean Color Instrument, Lorraine A. Remer, Anthony B. Davis, Shana Mattoo, Robert C. Levy, Olga V. Kalashnikova, Odele Coddington, Jacek Chowdhary, Kirk Knobelspiesse, Xiaoguang Xu, Ziauddin Ahmad, Emmanuel Boss, Brian Cairns, Heidi M. Dierssen, David J. Diner, Bryan Franz, Robert Frouin, Bo Cai Gao, Amir Ibrahim, J. Vanderlei Martins, Ali H. Omar, Omar Torres, Feng Xu, Peng Wang Zhai

Marine Sciences Faculty Scholarship

NASA’s Plankton, Aerosol, Clouds, ocean Ecosystem (PACE) satellite mission is scheduled to launch in 2022, with the Ocean Color Instrument (OCI) on board. For the first time reflected sunlight from the Earth across a broad spectrum from the ultraviolet (UV: 350 nm) to the short wave infrared (SWIR: 2260 nm) will be measured from a single instrument at 1 km spatial resolution. While seven discrete bands will represent the SWIR, the spectrum from 350 to 890 nm will be continuously covered with a spectral resolution of 5 nm. OCI will thus combine in a single instrument (and at an enhanced …

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Modeling Atmosphere-Ocean Radiative Transfer: A Pace Mission Perspective, Jacek Chowdhary, Peng Wang Zhai, Emmanuel Boss, Heidi Dierssen, Robert Frouin, Amir Ibrahim, Zhongping Lee, Lorraine A. Remer, Michael Twardowski, Feng Xu, Xiaodong Zhang, Matteo Ottaviani, William Reed Espinosa, Didier Ramon Jun 2019

Modeling Atmosphere-Ocean Radiative Transfer: A Pace Mission Perspective, Jacek Chowdhary, Peng Wang Zhai, Emmanuel Boss, Heidi Dierssen, Robert Frouin, Amir Ibrahim, Zhongping Lee, Lorraine A. Remer, Michael Twardowski, Feng Xu, Xiaodong Zhang, Matteo Ottaviani, William Reed Espinosa, Didier Ramon

Marine Sciences Faculty Scholarship

The research frontiers of radiative transfer (RT) in coupled atmosphere-ocean systems are explored to enable new science and specifically to support the upcoming Plankton, Aerosol, Cloud ocean Ecosystem (PACE) satellite mission. Given (i) the multitude of atmospheric and oceanic constituents at any given moment that each exhibits a large variety of physical and chemical properties and (ii) the diversity of light-matter interactions (scattering, absorption, and emission), tackling all outstanding RT aspects related to interpreting and/or simulating light reflected by atmosphere-ocean systems becomes impossible. Instead, we focus on both theoretical and experimental studies of RT topics important to the science threshold …

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Synthesis Of A Fluorescently Tagged Bioactive Probe Specific To Neutrophils In A Zebrafish Model, Sadie Xiaohua Novak Jun 2019

Synthesis Of A Fluorescently Tagged Bioactive Probe Specific To Neutrophils In A Zebrafish Model, Sadie Xiaohua Novak

Honors College

Fluorescent bioimaging has proven to be a powerful tool in non-invasively studying biological processes in living systems. One application of this technique is being used in a transgenic zebrafish model to study the innate immune response to infection of Candida Albicans. Methods utilizing genetic engineering, however, are limited by time constraints that arise when having to depend upon the ability to modify genetics of the model. To bypass these constraints, this project seeks to produce a modified version of a previously developed biofluorescent probe, which was validated in a mouse model. The probe consists of three components, a hexapeptide, …

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Inversion Of Inherent Optical Properties In Optically Complex Waters Using Sentinel-3a/Olci Images: A Case Study Using China's Three Largest Freshwater Lakes, Kun Xue, Ronghua Ma, Hongtao Duan, Ming Shen, Emmanuel Boss, Zhigang Cao May 2019

Inversion Of Inherent Optical Properties In Optically Complex Waters Using Sentinel-3a/Olci Images: A Case Study Using China's Three Largest Freshwater Lakes, Kun Xue, Ronghua Ma, Hongtao Duan, Ming Shen, Emmanuel Boss, Zhigang Cao

Marine Sciences Faculty Scholarship

Inherent optical properties (IOPs) play an important role in underwater light field, and are difficult to estimate accurately using satellite data in optically complex waters. To study water quality in appropriate temporal and spatial scales, it is necessary to develop methods to obtain IOPs form space-based observation with quantified uncertainties. Field-measured IOP data (N = 405) were collected from 17 surveys between 2011 and 2017 in the three major largest freshwater lakes of China (Lake Chaohu, Lake Taihu, and Lake Hongze) in the lower reaches of the Yangtze River and Huai River (LYHR). Here we provide a case-study on how …

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The Effect Of Embryonic Arsenic Exposure On The Sensorimotor Behavior Of Zebrafish (Danio Rerio), Laura Paye Apr 2019

The Effect Of Embryonic Arsenic Exposure On The Sensorimotor Behavior Of Zebrafish (Danio Rerio), Laura Paye

Honors College

The goal of this study is to determine the effect of arsenic exposure on vision in zebrafish (Danio rerio). The optic system of D. rerio is ideal for examining visual defects. Their eyes are similar to eyes of humans and can therefore be useful models in studies of human eye disease. Their optic system functions similarly to humans, so it is beneficial to observe how zebrafish are affected by contaminants in the environment. Arsenic is ubiquitous in groundwater, due to its natural presence in bed rock, but is elevated by human activities. In order to see any …

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Heard It Through The Grapevine... Winery Owners Explain The Role Of Sustainability In Maine's Emerging Industry, Michaela Murray Apr 2019

Heard It Through The Grapevine... Winery Owners Explain The Role Of Sustainability In Maine's Emerging Industry, Michaela Murray

Honors College

With increased awareness of humanity’s profound impact on the climate, interest in the notion of sustainability has expanded across all disciplines. The inherent link between food and climate has specifically motivated consideration of sustainability within agricultural and food production sectors. The global wine industry has long acknowledged the social, environmental, and economic sustainability concerns (e.g. triple-bottom-line) of their industry. Beginning in 1992 with The Lodi Winegrape Commission in California, several wine regions including France, Australia and South Africa have developed workbooks and policies for sustainable wine production. The budding wine industry in the state of Maine has yet to explore …

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Exploring Semantic Hierarchies To Improve Resolution Theorem Proving On Ontologies, Stanley Small Apr 2019

Exploring Semantic Hierarchies To Improve Resolution Theorem Proving On Ontologies, Stanley Small

Honors College

A resolution-theorem-prover (RTP) evaluates the validity (truthfulness) of conjectures against a set of axioms in a knowledge base. When given a conjecture, an RTP attempts to resolve the negated conjecture with axioms from the knowledge base until the prover nds a contradiction. If the RTP nds a contradiction between the axioms and a negated conjecture, the conjecture is proven. The order in which the axioms within the knowledge-base are evaluated signicantly impacts the runtime of the program, as the search-space increases exponentially with the number of axioms. Ontologies, knowledge bases with semantic (and predominantly hierarchical) structures, describe objects and their …

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Fitting The Sir Epidemiological Model To Influenza Data, Madeline Dorr Apr 2019

Fitting The Sir Epidemiological Model To Influenza Data, Madeline Dorr

Honors College

This project sought to provide thorough instructions to fitting the SIR epidemiological model to influenza data and defend its use in this context. Directions for coding the SIR model in the R programming language are detailed. This includes estimating parameter values, such as infection and recovery rate, and how to double check these values. This project also included analysis of problems that can arise when fitting this model. This includes accounting for vaccination rate and issues with the nature of this type of data. Either these problems were explored, and solutions were provided, or suggestions were provided for future research.

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Interactions Of Gold Thiolates With Protein Disulfides, Anna Tyrina Apr 2019

Interactions Of Gold Thiolates With Protein Disulfides, Anna Tyrina

Honors College

This thesis research focuses on the interaction of gold(I) thiolates with the disulfide bonds in proteins, using insulin as a model protein. Insulin contains three disulfide bonds that can break apart during thiol-disulfide exchange reactions. The goal of this research was to compare the reactivity of aromatic thiols and gold(I) thiolates in thiol-disulfide exchange reactions with insulin. When the disulfide bonds in insulin are cleaved, a suspension of the beta chain particles forms, which scatters 650 nm light, therefore making it convenient to monitor the reaction using UV-Vis spectroscopy. The rate of formation of the colloidal suspension is taken to …

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How Acidic Sediments And Seawater Affect Interactive Effects Of Predation On Survival, Growth, And Recruitment Of Wild And Cultured Soft-Shell Clams, Mya Arenaria L., Along A Tidal Gradient At Two Intertidal Sites In Eastern Maine, Brian F. Beal, William Otto Mar 2019

How Acidic Sediments And Seawater Affect Interactive Effects Of Predation On Survival, Growth, And Recruitment Of Wild And Cultured Soft-Shell Clams, Mya Arenaria L., Along A Tidal Gradient At Two Intertidal Sites In Eastern Maine, Brian F. Beal, William Otto

Miscellaneous Publications

No abstract provided.

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Retrieval Of Phytoplankton Pigments From Underway Spectrophotometry In The Fram Strait, Yangyang Liu, Emmanuel Boss, Alison Chase, Hongyan Xi, Xiaodong Zhang, Rüdiger Röttgers, Yanqun Pan, Astrid Bracher Feb 2019

Retrieval Of Phytoplankton Pigments From Underway Spectrophotometry In The Fram Strait, Yangyang Liu, Emmanuel Boss, Alison Chase, Hongyan Xi, Xiaodong Zhang, Rüdiger Röttgers, Yanqun Pan, Astrid Bracher

Marine Sciences Faculty Scholarship

Phytoplankton in the ocean are extremely diverse. The abundance of various intracellular pigments are often used to study phytoplankton physiology and ecology, and identify and quantify different phytoplankton groups. In this study, phytoplankton absorption spectra (a ph (λ)) derived from underway flow-through AC-S measurements in the Fram Strait are combined with phytoplankton pigment measurements analyzed by high-performance liquid chromatography (HPLC) to evaluate the retrieval of various pigment concentrations at high spatial resolution. The performances of two approaches, Gaussian decomposition and the matrix inversion technique are investigated and compared. Our study is the first to apply the matrix inversion technique to …

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The Tara Pacific Expedition—A Pan-Ecosystemic Approach Of The “-Omics” Complexity Of Coral Reef Holobionts Across The Pacific Ocean, Serge Planes, Denis Allemand, Sylvain Agostini, Bernard Banaigs, Emilie Boissin, Emmanuel Boss, Guillaume Bourdin, Chris Bowler, Eric Douville, J. M. Flores, Didier Forcioli, Paola Furla, Pierre E. Galand, Jean François Ghiglione, Eric Gilson, Fabien Lombard, Clémentine Moulin, Stephane Pesant, Julie Poulain, Stéphanie Reynaud, Sarah Romac, Matthew B. Sullivan, Shinichi Sunagawa, Olivier P. Thomas, Romain Troublé, Colomban De Vargas, Rebecca Vega Thurber, Christian R. Voolstra, Patrick Wincker, Didier Zoccola, E. Armstrong Jan 2019

The Tara Pacific Expedition—A Pan-Ecosystemic Approach Of The “-Omics” Complexity Of Coral Reef Holobionts Across The Pacific Ocean, Serge Planes, Denis Allemand, Sylvain Agostini, Bernard Banaigs, Emilie Boissin, Emmanuel Boss, Guillaume Bourdin, Chris Bowler, Eric Douville, J. M. Flores, Didier Forcioli, Paola Furla, Pierre E. Galand, Jean François Ghiglione, Eric Gilson, Fabien Lombard, Clémentine Moulin, Stephane Pesant, Julie Poulain, Stéphanie Reynaud, Sarah Romac, Matthew B. Sullivan, Shinichi Sunagawa, Olivier P. Thomas, Romain Troublé, Colomban De Vargas, Rebecca Vega Thurber, Christian R. Voolstra, Patrick Wincker, Didier Zoccola, E. Armstrong

Marine Sciences Faculty Scholarship

Coral reefs are the most diverse habitats in the marine realm. Their productivity, structural complexity, and biodiversity critically depend on ecosystem services provided by corals that are threatened because of climate change effects—in particular, ocean warming and acidification. The coral holobiont is composed of the coral animal host, endosymbiotic dinoflagellates, associated viruses, bacteria, and other microeukaryotes. In particular, the mandatory photosymbiosis with microalgae of the family Symbiodiniaceae and its consequences on the evolution, physiology, and stress resilience of the coral holobiont have yet to be fully elucidated. The functioning of the holobiont as a whole is largely unknown, although bacteria …

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The Plankton, Aerosol, Cloud, Ocean Ecosystem Mission Status, Science, Advances, P. Jeremy Werdell, Michael J. Behrenfeld, Paula S. Bontempi, Emmanuel Boss, Brian Cairns, Gary T. Davis, Bryan A. Franz, Ulrik B. Gliese, Eric T. Gorman, Otto Hasekamp, Kirk D. Knobelspiesse, Antonio Mannino, J. Vanderlei Martins, Charlesr Mcclain, Gerhard Meister, Lorraine A. Remer Jan 2019

The Plankton, Aerosol, Cloud, Ocean Ecosystem Mission Status, Science, Advances, P. Jeremy Werdell, Michael J. Behrenfeld, Paula S. Bontempi, Emmanuel Boss, Brian Cairns, Gary T. Davis, Bryan A. Franz, Ulrik B. Gliese, Eric T. Gorman, Otto Hasekamp, Kirk D. Knobelspiesse, Antonio Mannino, J. Vanderlei Martins, Charlesr Mcclain, Gerhard Meister, Lorraine A. Remer

Marine Sciences Faculty Scholarship

The Plankton, Aerosol, Cloud, Ocean Ecosystem (PACE) mission represents the National Aeronautics and Space Administration's (NASA) next investment in satellite ocean color and the study of Earth's ocean-atmosphere system, enabling new insights into oceanographic and atmospheric responses to Earth's changing climate. PACE objectives include extending systematic cloud, aerosol, and ocean biological and biogeochemical data records, making essential ocean color measurements to further understand marine carbon cycles, food-web processes, and ecosystem responses to a changing climate, and improving knowledge of how aerosols influence ocean ecosystems and, conversely, how ocean ecosystems and photochemical processes affect the atmosphere. PACE objectives also encompass management …

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Retrieving Aerosol Characteristics From The Pace Mission, Part 2: Multi-Angle And Polarimetry, Lorraine A. Remer, Kirk D. Knobelspiesse, Peng Wang Zhai, Feng Xu, Olga Kalashnikova, Jacek Chowdhary, Otto P. Hasekamp, Oleg Dubovik, Lianghai Wu, Ziauddin Ahmad, Emmanuel Boss, Brian Cairns, Odele Coddington, Anthony B. Davis, Heidi M. Dierssen, David J. Diner, Bryan A. Franz, Robert J. Frouin, Bo Cai Gao, Amir Ibrahim, Robert C. Levy, J. Vanderlei Martins, Ali H. Omar, Omar Torres Jan 2019

Retrieving Aerosol Characteristics From The Pace Mission, Part 2: Multi-Angle And Polarimetry, Lorraine A. Remer, Kirk D. Knobelspiesse, Peng Wang Zhai, Feng Xu, Olga Kalashnikova, Jacek Chowdhary, Otto P. Hasekamp, Oleg Dubovik, Lianghai Wu, Ziauddin Ahmad, Emmanuel Boss, Brian Cairns, Odele Coddington, Anthony B. Davis, Heidi M. Dierssen, David J. Diner, Bryan A. Franz, Robert J. Frouin, Bo Cai Gao, Amir Ibrahim, Robert C. Levy, J. Vanderlei Martins, Ali H. Omar, Omar Torres

Marine Sciences Faculty Scholarship

The Plankton, Aerosol, Clouds, ocean Ecosystem (PACE) mission presents new opportunities and new challenges in applying observations of two complementary multi-angle polarimeters for the space-based retrieval of global aerosol properties. Aerosol remote sensing from multi-angle radiometric-only observations enables aerosol characterization to a greater degree than single-view radiometers, as demonstrated by nearly two decades of heritage instruments. Adding polarimetry to the multi-angle observations allows for the retrieval of aerosol optical depth, Angstrom exponent, parameters of size distribution, measures of aerosol absorption, complex refractive index and degree of nonsphericity of the particles, as demonstrated by two independent retrieval algorithms applied to the …

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