Open Access. Powered by Scholars. Published by Universities.®

Physical Sciences and Mathematics Commons

Open Access. Powered by Scholars. Published by Universities.®

Articles 1 - 3 of 3

Full-Text Articles in Physical Sciences and Mathematics

Evidence For Microbial Enhanced Electrical Conductivity In Hydrocarbon-Contaminated Sediments, Estella A. Atekwana, Eliot A. Atekwana, D. Dale Werkema, Jonathan P. Allen, Laura A. Smart, Joseph W. Duris, Daniel P. Cassidy, William A. Sauck, Silvia Rossbach Dec 2004

Evidence For Microbial Enhanced Electrical Conductivity In Hydrocarbon-Contaminated Sediments, Estella A. Atekwana, Eliot A. Atekwana, D. Dale Werkema, Jonathan P. Allen, Laura A. Smart, Joseph W. Duris, Daniel P. Cassidy, William A. Sauck, Silvia Rossbach

Geosciences and Geological and Petroleum Engineering Faculty Research & Creative Works

Bulk electrical conductivity of sediments during microbial mineralization of diesel was investigated in a mesoscale laboratory experiment consisting of biotic contaminated and uncontaminated columns. Population numbers of oil degrading microorganisms increased with a clear pattern of depth zonation within the contaminated column not observed in the uncontaminated column. Microbial community structure determined from ribosomal DNA intergenic spacer analysis showed a highly specialized microbial community in the contaminated column. The contaminated column showed temporal increases in bulk conductivity, dissolved inorganic carbon, and calcium, suggesting that the high bulk conductivity is due to enhanced mineral weathering from microbial activity. The greatest change …


Interactive Dna Sequence And Structure Design For Dna Nanoapplications, Mingjun Zhang, Chaman Sabharwal, Weimin Tao, Tzyh-Jong Tarn, Ning Xi, Guangyong Li Jan 2004

Interactive Dna Sequence And Structure Design For Dna Nanoapplications, Mingjun Zhang, Chaman Sabharwal, Weimin Tao, Tzyh-Jong Tarn, Ning Xi, Guangyong Li

Computer Science Faculty Research & Creative Works

DNA sequence and structure design is very important for DNA nanoapplications. A computer-aided design tool is needed for exploring DNA sequence and structure of interests before experimental synthesis, which is a time- and labor-consuming process. In this paper, an interactive DNA sequence and structure design software tool called DNA shop is proposed and implemented. The visualization tool can generate DNA structures by specifying, selecting, and moving DNA sequences around and display corresponding structures. Using the tool, DNA sequence and structure can be visually inspected in three-dimensional space before experimental studies.


Interactive Dna Sequence And Structure Design For Dna Nanotechnology And Dna Computation, Mingjun Zhang, Chaman Sabharwal, Weimin Tao, Tzyh-Jong Tarn, Ning Xi, Guangyong Li Jan 2004

Interactive Dna Sequence And Structure Design For Dna Nanotechnology And Dna Computation, Mingjun Zhang, Chaman Sabharwal, Weimin Tao, Tzyh-Jong Tarn, Ning Xi, Guangyong Li

Computer Science Faculty Research & Creative Works

DNA sequence and structure design are very important for DNA nanotechnology and DNA computation. A computer aided design tool is needed for exploring DNA sequence and structure of interests before experimental synthesis, which is a very time and labor consuming process. In this paper, an interactive DNA sequence and structure design software tool called DNA shop is proposed and implemented.