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Full-Text Articles in Physical Sciences and Mathematics

Cardiogpt: An Ecg Interpretation Generation Model, Guohua Fu, Jianwei Zheng, Islam Abudayyeh, Chizobam Ani, Cyril Rakovski, Louis Ehwerhemuepha, Hongxia Lu, Yongjuan Guo, Shenglin Liu, Huimin Chu, Bing Yang Apr 2024

Cardiogpt: An Ecg Interpretation Generation Model, Guohua Fu, Jianwei Zheng, Islam Abudayyeh, Chizobam Ani, Cyril Rakovski, Louis Ehwerhemuepha, Hongxia Lu, Yongjuan Guo, Shenglin Liu, Huimin Chu, Bing Yang

Mathematics, Physics, and Computer Science Faculty Articles and Research

Numerous supervised learning models aimed at classifying 12-lead electrocardiograms into different groups have shown impressive performance by utilizing deep learning algorithms. However, few studies are dedicated to applying the Generative Pre-trained Transformer (GPT) model in interpreting electrocardiogram (ECG) using natural language. Thus, we are pioneering the exploration of this uncharted territory by employing the CardioGPT model to tackle this challenge. We used a dataset of ECGs (standard 10s, 12-channel format) from adult patients, with 60 distinct rhythms or conduction abnormalities annotated by board-certified, actively practicing cardiologists. The ECGs were collected from The First Affiliated Hospital of Ningbo University and Shanghai …


Accurate Characterization Of Binding Kinetics And Allosteric Mechanisms For The Hsp90 Chaperone Inhibitors Using Ai-Augmented Integrative Biophysical Studies, Chao Xu, Xianglei Zhang, Lianghao Zhao, Gennady M. Verkhivker, Fang Bai Apr 2024

Accurate Characterization Of Binding Kinetics And Allosteric Mechanisms For The Hsp90 Chaperone Inhibitors Using Ai-Augmented Integrative Biophysical Studies, Chao Xu, Xianglei Zhang, Lianghao Zhao, Gennady M. Verkhivker, Fang Bai

Mathematics, Physics, and Computer Science Faculty Articles and Research

The binding kinetics of drugs to their targets are gradually being recognized as a crucial indicator of the efficacy of drugs in vivo, leading to the development of various computational methods for predicting the binding kinetics in recent years. However, compared with the prediction of binding affinity, the underlying structure and dynamic determinants of binding kinetics are more complicated. Efficient and accurate methods for predicting binding kinetics are still lacking. In this study, quantitative structure–kinetics relationship (QSKR) models were developed using 132 inhibitors targeting the ATP binding domain of heat shock protein 90α (HSP90α) to predict the dissociation rate …


Enhancing Landslide Susceptibility Modelling Through A Novel Non-Landslide Sampling Method And Ensemble Learning Technique, Chao Zhou, Yue Wang, Ying Cao, Ramesh P. Singh, Bayes Ahmed, Mahdi Motagh, Yang Wang, Ling Chen, Guangchao Tan, Shanshan Li Mar 2024

Enhancing Landslide Susceptibility Modelling Through A Novel Non-Landslide Sampling Method And Ensemble Learning Technique, Chao Zhou, Yue Wang, Ying Cao, Ramesh P. Singh, Bayes Ahmed, Mahdi Motagh, Yang Wang, Ling Chen, Guangchao Tan, Shanshan Li

Mathematics, Physics, and Computer Science Faculty Articles and Research

In recent years, several catastrophic landslide events have been observed throughout the globe, threatening to lives and infrastructures. To minimize the impact of landslides, the need of landslide susceptibility map is important. The study aims to extract high-quality non-landslide samples and improve the accuracy of landslide susceptibility modelling (LSM) outcomes by applying a coupled method of ensemble learning and Machine Learning (ML). The Zigui-Badong section of the Three Gorges Reservoir area (TGRA) in China was considered in the present study. Twelve influencing factors were selected as inputs for LSM, and the relationship between each causal factor and landslide spatial development …


Predicting Suicidal And Self-Injurious Events In A Correctional Setting Using Ai Algorithms On Unstructured Medical Notes And Structured Data, Hongxia Lu, Alex Barrett, Albert Pierce, Jianwei Zheng, Yun Wang, Chun Chiang, Cyril Rakovski Jan 2023

Predicting Suicidal And Self-Injurious Events In A Correctional Setting Using Ai Algorithms On Unstructured Medical Notes And Structured Data, Hongxia Lu, Alex Barrett, Albert Pierce, Jianwei Zheng, Yun Wang, Chun Chiang, Cyril Rakovski

Mathematics, Physics, and Computer Science Faculty Articles and Research

Suicidal and self-injurious incidents in correctional settings deplete the institutional and healthcare resources, create disorder and stress for staff and other inmates. Traditional statistical analyses provide some guidance, but they can only be applied to structured data that are often difficult to collect and their recommendations are often expensive to act upon. This study aims to extract information from medical and mental health progress notes using AI algorithms to make actionable predictions of suicidal and self-injurious events to improve the efficiency of triage for health care services and prevent suicidal and injurious events from happening at California's Orange County Jails. …


A High Precision Machine Learning-Enabled System For Predicting Idiopathic Ventricular Arrhythmia Origins, Jianwei Zheng, Guohua Fu, Daniele Struppa, Islam Abudayyeh, Tahmeed Contractor, Kyle Anderson, Huimin Chu, Cyril Rakovski Mar 2022

A High Precision Machine Learning-Enabled System For Predicting Idiopathic Ventricular Arrhythmia Origins, Jianwei Zheng, Guohua Fu, Daniele Struppa, Islam Abudayyeh, Tahmeed Contractor, Kyle Anderson, Huimin Chu, Cyril Rakovski

Mathematics, Physics, and Computer Science Faculty Articles and Research

Background: Radiofrequency catheter ablation (CA) is an efficient antiarrhythmic treatment with a class I indication for idiopathic ventricular arrhythmia (IVA), only when drugs are ineffective or have unacceptable side effects. The accurate prediction of the origins of IVA can significantly increase the operation success rate, reduce operation duration and decrease the risk of complications. The present work proposes an artificial intelligence-enabled ECG analysis algorithm to estimate possible origins of idiopathic ventricular arrhythmia at a clinical-grade level accuracy.

Method: A total of 18,612 ECG recordings extracted from 545 patients who underwent successful CA to treat IVA were proportionally sampled into training, …


Towards Advancing The Earthquake Forecasting By Machine Learning Of Satellite Data, Pan Xiong, Lei Tong, Kun Zhang, Xuhui Shen, Roberto Battiston, Dimitar Ouzounov, Roberto Iuppa, Danny Crookes, Cheng Long, Huyui Zhou Jan 2021

Towards Advancing The Earthquake Forecasting By Machine Learning Of Satellite Data, Pan Xiong, Lei Tong, Kun Zhang, Xuhui Shen, Roberto Battiston, Dimitar Ouzounov, Roberto Iuppa, Danny Crookes, Cheng Long, Huyui Zhou

Mathematics, Physics, and Computer Science Faculty Articles and Research

Earthquakes have become one of the leading causes of death from natural hazards in the last fifty years. Continuous efforts have been made to understand the physical characteristics of earthquakes and the interaction between the physical hazards and the environments so that appropriate warnings may be generated before earthquakes strike. However, earthquake forecasting is not trivial at all. Reliable forecastings should include the analysis and the signals indicating the coming of a significant quake. Unfortunately, these signals are rarely evident before earthquakes occur, and therefore it is challenging to detect such precursors in seismic analysis. Among the available technologies for …


An Assessment Of The Hydrological Trends Using Synergistic Approaches Of Remote Sensing And Model Evaluations Over Global Arid And Semi-Arid Regions, Wenzhao Li, Hesham El-Askary, Rejoice Thomas, Surya Prakash Tiwari, Karuppasamy Manikandan, Thomas Piechota, Daniele Struppa Dec 2020

An Assessment Of The Hydrological Trends Using Synergistic Approaches Of Remote Sensing And Model Evaluations Over Global Arid And Semi-Arid Regions, Wenzhao Li, Hesham El-Askary, Rejoice Thomas, Surya Prakash Tiwari, Karuppasamy Manikandan, Thomas Piechota, Daniele Struppa

Mathematics, Physics, and Computer Science Faculty Articles and Research

Drylands cover about 40% of the world’s land area and support two billion people, most of them living in developing countries that are at risk due to land degradation. Over the last few decades, there has been warming, with an escalation of drought and rapid population growth. This will further intensify the risk of desertification, which will seriously affect the local ecological environment, food security and people’s lives. The goal of this research is to analyze the hydrological and land cover characteristics and variability over global arid and semi-arid regions over the last decade (2010–2019) using an integrative approach of …


Urban Health Related Air Quality Indicators Over The Middle East And North Africa Countries Using Multiple Satellites And Aeronet Data, Maram El-Nadry, Wenzhao Li, Hesham El-Askary, Mohamed A. Awad, Alaa Ramadan Awad Sep 2019

Urban Health Related Air Quality Indicators Over The Middle East And North Africa Countries Using Multiple Satellites And Aeronet Data, Maram El-Nadry, Wenzhao Li, Hesham El-Askary, Mohamed A. Awad, Alaa Ramadan Awad

Mathematics, Physics, and Computer Science Faculty Articles and Research

Air pollution is reported as one of the most severe environmental problems in the Middle East and North Africa (MENA) region. Remotely sensed data from newly available TROPOMI - TROPOspheric Monitoring Instrument on board Sentinel-5 Precursor, shows an annual mean of high-resolution maps of selected air quality indicators (NO2, CO, O3, and UVAI) of the MENA countries for the first time. The correlation analysis among the aforementioned indicators show the coherency of the air pollutants in urban areas. Multi-year data from the Aerosol Robotic Network (AERONET) stations from nine MENA countries are utilized here to study the aerosol optical depth …


Editorial: Machine Learning In Biomolecular Simulations, Gennady M. Verkhivker, Vojtech Spiwok, Francesco Luigi Gervasio Aug 2019

Editorial: Machine Learning In Biomolecular Simulations, Gennady M. Verkhivker, Vojtech Spiwok, Francesco Luigi Gervasio

Mathematics, Physics, and Computer Science Faculty Articles and Research

"Interest in machine learning is growing in all fields of science, industry, and business. This interest was not primarily initiated by new theoretical findings. Interestingly, the theoretical basis of the majority of machine learning techniques, such as artificial neural networks, decision trees, or kernel methods, have been known for a relatively long time. Instead, there are other effects that triggered the recent boom of machine learning."


Coral Reef Change Detection In Remote Pacific Islands Using Support Vector Machine Classifiers, Justin J. Gapper, Hesham El-Askary, Erik Linstead, Thomas Piechota Jun 2019

Coral Reef Change Detection In Remote Pacific Islands Using Support Vector Machine Classifiers, Justin J. Gapper, Hesham El-Askary, Erik Linstead, Thomas Piechota

Mathematics, Physics, and Computer Science Faculty Articles and Research

Despite the abundance of research on coral reef change detection, few studies have been conducted to assess the spatial generalization principles of a live coral cover classifier trained using remote sensing data from multiple locations. The aim of this study is to develop a machine learning classifier for coral dominated benthic cover-type class (CDBCTC) based on ground truth observations and Landsat images, evaluate the performance of this classifier when tested against new data, then deploy the classifier to perform CDBCTC change analysis of multiple locations. The proposed framework includes image calibration, support vector machine (SVM) training and tuning, statistical assessment …