Physical Sciences and Mathematics Commons^™

Bayesian Topological Machine Learning, Christopher A. Oballe

Doctoral Dissertations

Topological data analysis encompasses a broad set of ideas and techniques that address 1) how to rigorously define and summarize the shape of data, and 2) use these constructs for inference. This dissertation addresses the second problem by developing new inferential tools for topological data analysis and applying them to solve real-world data problems. First, a Bayesian framework to approximate probability distributions of persistence diagrams is established. The key insight underpinning this framework is that persistence diagrams may be viewed as Poisson point processes with prior intensities. With this assumption in hand, one may compute posterior intensities by adopting techniques …

Statistical Computational Topology And Geometry For Understanding Data, Joshua Lee Mike

Doctoral Dissertations

Here we describe three projects involving data analysis which focus on engaging statistics with the geometry and/or topology of the data.

The first project involves the development and implementation of kernel density estimation for persistence diagrams. These kernel densities consider neighborhoods for every feature in the center diagram and gives to each feature an independent, orthogonal direction. The creation of kernel densities in this realm yields a (previously unavailable) full characterization of the (random) geometry of a dataspace or data distribution.

In the second project, cohomology is used to guide a search for kidney exchange cycles within a kidney paired …

Evaluating The Effects Of Standardized Patient Care Pathways On Clinical Outcomes, Anna V. Romanova

Doctoral Dissertations

The main focus of this study is to create a standardized approach to evaluating the impact of the patient care pathways across all major disease categories and key outcome measures in a hospital setting when randomized clinical trials are not feasible. Toward this goal I identify statistical methods, control factors, and adjustments that can correct for potential confounding in observational studies. I investigate the efficiency of existing bias correction methods under varying conditions of imbalanced samples through a Monte Carlo simulation. The simulation results are then utilized in a case study for one of the largest primary diagnosis areas, chronic …

If And How Many 'Races'? The Application Of Mixture Modeling To World-Wide Human Craniometric Variation, Bridget Frances Beatrice Algee-Hewitt

Doctoral Dissertations

Studies in human cranial variation are extensive and widely discussed. While skeletal biologists continue to focus on questions of biological distance and population history, group-specific knowledge is being increasingly used for human identification in medico-legal contexts. The importance of this research has been often overshadowed by both philosophic and methodological concerns. Many analyses have been constrained in their scope by the limited availability of representative samples and readily criticized for adopting statistical techniques that require user-guidance and a priori information. A multi-part project is presented here that implements model-based clustering as an alternative approach for population studies using craniometric traits. …

Mixture Of Factor Analyzers With Information Criteria And The Genetic Algorithm, Esra Turan

Doctoral Dissertations

In this dissertation, we have developed and combined several statistical techniques in Bayesian factor analysis (BAYFA) and mixture of factor analyzers (MFA) to overcome the shortcoming of these existing methods. Information Criteria are brought into the context of the BAYFA model as a decision rule for choosing the number of factors m along with the Press and Shigemasu method, Gibbs Sampling and Iterated Conditional Modes deterministic optimization. Because of sensitivity of BAYFA on the prior information of the factor pattern structure, the prior factor pattern structure is learned directly from the given sample observations data adaptively using Sparse Root algorithm. …

A New Screening Methodology For Mixture Experiments, Maria Weese

Doctoral Dissertations

Many materials we use in daily life are comprised of a mixture; plastics, gasoline, food, medicine, etc. Mixture experiments, where factors are proportions of components and the response depends only on the relative proportions of the components, are an integral part of product development and improvement. However, when the number of components is large and there are complex constraints, experimentation can be a daunting task. We study screening methods in a mixture setting using the framework of the Cox mixture model [1]. We exploit the easy interpretation of the parameters in the Cox mixture model and develop methods for screening …