Physical Sciences and Mathematics Commons^™

Structured Illumination Diffuse Optical Tomography For Mouse Brain Imaging, Matthew Reisman

Arts & Sciences Electronic Theses and Dissertations

As advances in functional magnetic resonance imaging (fMRI) have transformed the study of human brain function, they have also widened the divide between standard research techniques used in humans and those used in mice, where high quality images are difficult to obtain using fMRI given the small volume of the mouse brain. Optical imaging techniques have been developed to study mouse brain networks, which are highly valuable given the ability to study brain disease treatments or development in a controlled environment. A planar imaging technique known as optical intrinsic signal (OIS) imaging has been a powerful tool for capturing functional …

Multiscale Imaging Of The Mouse Cortex Using Two-Photon Microscopy And Wide-Field Illumination, Jonathan Richard Bumstead

McKelvey School of Engineering Theses & Dissertations

The mouse brain can be studied over vast spatial scales ranging from microscopic imaging of single neurons to macroscopic measurements of hemodynamics acquired over the majority of the mouse cortex. However, most neuroimaging modalities are limited by a fundamental trade-off between the spatial resolution and the field-of-view (FOV) over which the brain can be imaged, making it difficult to fully understand the functional and structural architecture of the healthy mouse brain and its disruption in disease. My dissertation has focused on developing multiscale optical systems capable of imaging the mouse brain at both microscopic and mesoscopic spatial scales, specifically addressing …

Free-Space Measurements Of Dielectrics And Three-Dimensional Periodic Metamaterials, Clifford E. Kintner

Graduate Theses and Dissertations

This thesis presents the free-space measurements of a periodic metamaterial structure. The metamaterial unit cell consists of two dielectric sheets intersecting at 90 degrees. The dielectric is a polyetherimide-based material 0.001” thick. Each sheet has a copper capacitively-loaded loop (CLL) structure on the front and a cut-wire structure on the back. Foam material is used to support the unit cells. The unit cell repeats 40 times in the x-direction, 58 times in the y-direction and 5 times in the z-direction. The sample measures 12” × 12” × 1” in total. We use a free-space broadband system comprised of a pair …

Energy From Active Galactic Nuclei And The Effects On Host Spiral Galaxies, Amanda Schilling

Graduate Theses and Dissertations

I have investigated the energy output of active galactic nuclei (AGN) in order to understand how these objects evolve and the impact they may have on host galaxies. First, I looked at a sample of 96 AGN at redshifts $z \sim 2, 3,$ and $4$ which have imaging and thus luminosity measurements in the $griz$ and $JHK$ observed wavebands. For these galaxies, I have co-epochal data across those bands which accounted for variability in AGN luminosity. I used the luminosity measurements in the five bands to construct spectral energy distributions (SED) in the emitted optical-UV bands for each AGN. I …

Application Of Metamaterials To Rf Energy Harvesting And Infrared Photodetection, Clayton M. Fowler

USF Tampa Graduate Theses and Dissertations

Techniques for adapting metamaterials for the improvement of RF energy harvesting and infrared photodetection are demonstrated using experimental and computer simulation methods. Two methods for RF energy harvesting are experimentally demonstrated and supported by computer simulation. In the first method, a metamaterial perfect absorber (MPA) is made into a rectenna capable of harvesting RF energy and delivering power to a load by soldering Schottky diodes onto connected split ring resonator (SRR) structures composing the planar metasurface of the perfect absorber. The metamaterial rectenna is accompanied by a ground plane placed parallel to it, which forms a Fabry-Perot cavity between the …

Electromagnetic Resonant Scattering In Layered Media With Fabrication Errors, Emily Anne Mchenry

LSU Doctoral Dissertations

In certain layered electromagnetic media, one can construct a waveguide that supports a harmonic electromagnetic field at a frequency that is embedded in the continuous spectrum. When the structure is perturbed, this embedded eigenvalue moves into the complex plane and becomes a “complex resonance” frequency. The real and imaginary parts of this complex frequency have physical meaning. They lie behind anomalous scattering behaviors known collectively as “Fano resonance”, and people are interested in tuning them to specific values in optical devices. The mathematics involves spectral theory and analytic perturbation theory and is well understood [16], at least on a theoretical …

The Simulation, Design, And Fabrication Of Optical Filters, John-Michael Juneau

Graduate Theses - Physics and Optical Engineering

The purpose of this thesis is to create a model for designing optical filters and a method for fabricating the designed filters onto a multitude of substrates, as well as to find ways to optimize this process. The substrates that were tested were quartz, glass slides, polycarbonate, and polyethylene terephthalate (PET). This work will account for variations in the deposition process and substrate cleaning method, in order to optimize the performance of the final optical filter. Several different filters were simulated and then fabricated. These filters included 3, 5, and 7-layer Bragg reflectors, 11-layer narrowband filters, and some variations of …

Faraday-Talbot Effect From A Circular Array Of Pillars, Jessica J. Pilgram

Physics

When an oil bath is vertically oscillating with an acceleration above some critical value, known as the Faraday threshold, the bath surface becomes unstable and nonlinear standing wave patterns emerge. One phenomenon that has been observed above the Faraday threshold is the formation of Faraday-Talbot carpets, resulting from near-field diffraction. The optical Talbot effect occurs when a monochromatic wave passes through a diffraction grating. In the near-field, the formation of self- images is observed at integer multiples of what is known as the Talbot length. These two-dimensional patterns have various applications including X-ray imaging and atom and particle trapping. Two- …

Fabrication And Characterization Of Thermo-Optic Mach-Zehnder Silicon Modulator, Yeongho Park

Graduate Theses - Physics and Optical Engineering

This thesis focuses on the modeling, design, and fabrication of the Thermo-Optic Mach-Zehnder Modulator, which is one of the simple active devices in silicon photonics. The Mach-Zehnder interferometer (MZI) was formed as an optical path on a silicon on insulator (SOI) wafer of 2040±80 nm thick, and the thermo-optic effect was used to modulate the infrared light of 1553 nm wavelength by controlling the temperature of the one arm of the MZI. To fabricate and understand the Si photonic device, the whole process from theory to the measurement setup is introduced. Additionally, all the fabrication details and some informative experiments …

Laser Heating Of Graphite And Pulsed Laser Ablation Of Titanium And Aluminum, William A. Bauer

Theses and Dissertations

Tactical missions for laser weapons include a wide variety of targets, increasing the demands on the laser lethality community. New approaches to reducing the dimensionality of laser and materials interactions are necessary to increase predictive capability. Self-contained systematic experimental study was conducted on continuous wave and pulsed laser interaction with graphite, Al, and Ti. The spectroscopy and plume dynamics from the heating and ablation of these materials was examined to characterize laser weapons effects, develop graphite response for thermal protection systems, and provide optical diagnostics for materials processing. Furthermore, analysis of ablated plume velocity distributions shows application of conventional Maxwell-Boltzmann …

Nonlinear Optical Studies Of Defects And Domain Structures In Perovskite-Type Dielectric Ceramics, David J. Ascienzo

Dissertations, Theses, and Capstone Projects

In order to improve future generations of dielectric capacitors a deeper understanding of voltage-induced dielectric breakdown and electrical energy storage limitations is required. This dissertation presents the use of far-field optical second harmonic generation (SHG) polarimetry for probing structural defects and polar domains in linear and nonlinear perovskite dielectric ceramics. We investigated the formation of electric field-induced structural distortions at pristine Fe-doped SrTiO₃ (Fe:STO) electrode interfaces, structural defect and strain formation due to oxygen vacancy migration in electrodegraded Fe:STO single crystals, and mixed tetragonal and rhombohedral phase domains in ferroelectric Zr-doped BaTiO₃ (BZT) films exhibiting excellent …

Control Of Light-Matter Interaction In 2d Semiconductors, Zheng Sun

Dissertations, Theses, and Capstone Projects

In this thesis we discuss the control of light matter interaction in low dimensional nanostructure cavity light confining structures. These structures have controllable dispersion properties through design which can be exploited to modify the interaction of light and matter. We will discuss two different types of light confining microcavities: a dielectric cavity and a metal cavity. The specific design of the cavity gives rise to the confinement of the electric field in the center where the nano-materials are placed. In this work, the main material was on the new class of two- dimensional semiconductors of transition metal dichalcogenides (TMDs). Due …

Construction And Passive Q-Switching Of A Ring-Cavity Erbium-Doped Fiber Laser Using Carbon Nanotubes As A Saturable Absorber, Austin Scott

Graduate Theses - Physics and Optical Engineering

The purpose of this thesis is to design, build, test, and achieve pulsed operation of a ring-cavity erbium-doped fiber laser using carbon nanotubes as a saturable absorber. The erbium-doped fiber is characterized first, cross-sections are calculated, and the gain value is determined. Subsequently, the ring cavity is constructed and the laser is operated in the continuous wave regime. Much time is then spent trying to characterize and utilize the carbon nanotubes successfully. Many dispersions are made using multiple solvents and dispersing media, various images are taken with both scanning electron and Raman microscopy, and attempts at purification are made. Saturable …

Local Moments And Itinerant Electrons: Gaining New Insights Through Investigating Electronic And Dynamical Properties, Nicholas Steven Sirica

Doctoral Dissertations

Magnetic materials are often categorized in terms of either a purely local or a purely itinerant picture despite the fact that the vast majority actually fall within a spectrum that ranges between these two extremes. It is from such a starting point that this thesis aims at developing an understanding of how the complex interplay between local moments and itinerant electrons ultimately affects the electronic and dynamical properties. Such ideas are explored in greater detail using two materials as case studies: the chiral helimagnet Cr_1/3NbS₂ [Cr intercalated Niobium Disulfide] and YFe₂Ge₂ [Yttrium Iron Germanide] …

Nanoscale Tilt Measurement Using A Cyclic Interferometer With Phase Stepping And Multiple Reflections, Tahereh Naderishahab

Graduate Theses - Physics and Optical Engineering

High accuracy tilt or roll angle measurement is required for a variety of engineering and scientific applications. Optical interferometry is normally used because it is non-contact and can measure tilt with a very high degree of accuracy. In this thesis, a cyclic interferometer has been developed with four mirrors to measure tilt angles as small as a few nanoradians. To measure the phase, a novel and simple method of phase shift by polarization was developed to enhance measurement sensitivity and accuracy. Since the cyclic interferometer is insensitive to external vibrations and turbulences, polarization phase step was accomplished with relative ease. …

High Precision Refractive Index Measurement Techniques Applied To The Analysis Of Neutron Damage And Effects In Caf2 Crystals, Joseph P. Morris Ph.D.

Nuclear Engineering ETDs

Neutron irradiation damages material by atomic displacements. The majority of these damage regions are microscopic and difficult to study, though they can cause a change in density and thus a change in refractive index in transparent materials. This work utilized CaF₂ crystals to track refractive index change based on neutron radiation dose. High precision refractive index measurements were performed utilizing a nested-cavity mode-locked laser where the CaF₂ crystal acted as a Fabry-Pérot Etalon (FPE). By comparing the repetition rate of the cavity and the repetition rate of the FPE, refractive index change was determined. Following several irradiation experiments, …

R&D Of A High-Performance Dirc Detector For A Future Electron-Ion Collider, Stacey Lee Allison

Physics Theses & Dissertations

An Electron-Ion Collider (EIC) is proposed as the next big scientific facility to be built in the United States, costing over $1 billion in design and construction. Each detector concept for the electron/ion beam interaction point is integrated into a large solenoidal magnet. The necessity for excellent hadronic particle identification (pion/kaon/proton) in the barrel region of the solenoid has pushed research and development (R&D) towards a new, high-performance Detection of Internally Reflected Cherenkov light (DIRC) detector design. The passage of a high energy charged particle through a fused silica bar of the DIRC generates optical Cherenkov radiation. A large fraction …

Design And Implementation Of A Microscope Based On Magneto-Optic Effects, Yuxuan Liu

Graduate Theses - Physics and Optical Engineering

When light passes through a medium that is subjected to a strong magnetic field, its polarization state may change due to magneto-optic effects such as Faraday rotation. An imaging system based on this polarization change is designed and constructed. The imaging system is built around a magnetic pulse field generator and able to detect polarization change of the incident light due to magneto-optic effects. An automated scheme is implemented using LabView. The program is developed to integrate all hardware and conduct multiple measurements automatically to enhance sensitivity. Basic testing measurements are conducted to evaluate the performance of the system. A …

Quantum Optical Interferometry And Quantum State Engineering, Richard J. Birrittella Jr

Dissertations, Theses, and Capstone Projects

We highlight some of our research done in the fields of quantum optical interferometry and quantum state engineering. We discuss the body of work for which our research is predicated, as well as discuss some of the fundamental tenants of the theory of phase estimation. We do this in the context of quantum optical interferometry where our primary interest lies in the calculation of the quantum Fisher information as it has been shown that the minimum phase uncertainty obtained, the quantum Cramer-Rao bound, is saturated by parity-based detection methods. We go on to show that the phase uncertainty one obtains …

Wave Propagation Inside Random Media, Xiaojun Cheng

Dissertations, Theses, and Capstone Projects

This thesis presents results of studies of wave scattering within and transmission through random and periodic systems. The main focus is on energy profiles inside quasi-1D and 1D random media.

The connection between transport and the states of the medium is manifested in the equivalence of the dimensionless conductance, g, and the Thouless number which is the ratio of the average linewidth and spacing of energy levels. This equivalence and theories regarding the energy profiles inside random media are based on the assumption that LDOS is uniform throughout the samples. We have conducted microwave measurements of the longitudinal energy profiles …

Multispectral Identification Array, Zachary D. Eagan

Computer Engineering

The Multispectral Identification Array is a device for taking full image spectroscopy data via the illumination of a subject with sixty-four unique spectra. The array combines images under the illumination spectra to produce an approximate reflectance graph for every pixel in a scene. Acquisition of an entire spectrum allows the array to differentiate objects based on surface material. Spectral graphs produced are highly approximate and should not be used to determine material properties, however the output is sufficiently consistent to allow differentiation and identification of previously sampled subjects. While not sufficiently advanced for use as a replacement to spectroscopy the …

Optical Physics Of Rifle Scopes, Ryan Perry

Physics

Optical systems are typically consist of multiple lenses and mirrors and are used in a wide variety of fields. While there exist a variety of setups, there are a few key concepts that are at the core of all of them. These could be used from the most advanced scientific research to a simple magnifying glass. They are also used in industry and consumer products such as glasses and cameras. We are going to go over these key concepts and show how they apply to telescopes, or more specifically rifle scopes. First, we will go over Snell's Law of refraction …

Basic Vision Research With Clinical Applications And Science Education Assessments, Andrew Wilson

Electronic Theses and Dissertations

Visual Acuity (VA) examinations are one of the most commonly conducted medical assessment throughout the world. Recent advances in computer technology allows for new forms of visual assessment to be conducted. In Part I of this thesis I demonstrate the capability of an automated computer program named VISION to assess human visual acuities. Different color combinations of an object against a background emitted from a computer screen are used to examine a variety of human color vision acuities. Results indicated a large difference in acuity scores between human subjects tested with these different color combinations. A single human subject exhibits …

Nuclear Spin Alignment In Optically Pumped Semiconductors, Matthew M. Willmering

Arts & Sciences Electronic Theses and Dissertations

Nuclear magnetic resonance (NMR) has shown its ability to be a very informative analytical technique due to the ability to measure very small changes in the energy splittings due to the nuclei’s local environment. However, this ability is hindered by the low sensitivity of the experiment. Many methods have been postulated and implemented to enhance the sensitivity of NMR experiments; one of which is optically pumped NMR (OPNMR). In this dissertation, the usefulness and potential applications of OPNMR are presented. First, a doubly resonant OPNMR probe was fabricated in order to complete more advanced NMR techniques while optically pumping the …

Measuring Molecular Orientation And Rotational Mobility Using A Tri-Spot Point Spread Function, Oumeng Zhang

McKelvey School of Engineering Theses & Dissertations

Single molecules have become a powerful tool for biophysicists since they were first optically detected 28 years ago. Understanding molecular orientation can not only improve the accuracy of single-molecule localization, but it can also provide insight into biochemical behaviors at the nanoscale. In this thesis, I present a method to measure the molecular orientation and rotational mobility of single-molecule emitters by designing and implementing a tri-spot point spread function. The point spread function is designed so that it is capable of measuring all degrees of freedom related to molecular orientation and rotational mobility. Its design is optimized by maximizing the …

Electrodynamical Modeling For Light Transport Simulation, Michael G. Saunders

Undergraduate Honors Theses

Modernity in the computer graphics community is characterized by a burgeoning interest in physically based rendering techniques. That is to say that mathematical reasoning from first principles is widely preferred to ad hoc, approximate reasoning in blind pursuit of photorealism. Thereby, the purpose of our research is to investigate the efficacy of explicit electrodynamical modeling by means of the generalized Jones vector given by Azzam [1] and the generalized Jones matrix given by Ortega-Quijano & Arce-Diego [2] in the context of stochastic light transport simulation for computer graphics. To augment the status quo path tracing framework with such a modeling …

Characterization Of Coupled Gold Nanoparticles In A Sparsely Populated Square Lattice, Roy Truett French Iii

Graduate Theses and Dissertations

Metal nanoparticles deposited in regular arrays spaced at optical wavelengths support a resonance due to a coherent coupling between localized surface plasmon mode and lattice diffraction allowing for engineering of tunable devices for use in biological sensors, nanoantennae, and enhanced spectroscopy. Techniques such as electron beam lithography, focused ion beam lithography, nanosphere lithography, and nanoimprint lithography are used for fabrication but are limited by cost, device throughput, and small deposition. Polymer soft lithography and continuous dewetting of particles is a potentially viable alternative showing promise in all of those areas. This thesis developed the fabrication of a refined hydrophilic nanoimprinted …

Infrared Energy Conversion In Plasmonic Fields At Two-Dimensional Semiconductors, Gregory Thomas Forcherio

Graduate Theses and Dissertations

Conversion of infrared energy within plasmonic fields at two-dimensional, semiconductive transition metal dichalcogenides (TMD) through plasmonic hot electron transport and nonlinear frequency mixing has important implications in next-generation optoelectronics. Drude-Lorentz theory and approximate discrete dipole (DDA) solutions to Maxwell’s equations guided metal nanoantenna design towards strong infrared localized surface plasmon resonance (LSPR). Excitation and damping dynamics of LSPR in heterostructures of noble metal nanoantennas and molybdenum- or tungsten-disulfide (MoS2; WS2) monolayers were examined by parallel synthesis of (i) DDA electrodynamic simulations and (ii) near-field electron energy loss (EELS) and far-field optical transmission UV-vis spectroscopic measurements. Susceptibility to second-order nonlinear frequency …

The Study Of Plasmonics In Nanohole Metallic Metamaterials, Kieffer J. Davieau

Electronic Thesis and Dissertation Repository

Plasmonics is the study of light-matter interaction. The interaction of incident light (photons) with surface plasmons present in metamaterials results in unique optical properties. Nanohole arrays are a metamaterial consisting of an array of sub-wavelength holes perforated in an optically thin metallic film which resides upon a dielectric material. The interaction of light with the surface plasmons present in the nanohole array leads to extraordinary optical transmission which produces resonance peaks with a higher intensity than the incident light. By changing the physical parameters of the nanohole array, such as hole size and periodicity, the resonance peaks can be tuned …

Coherent Response Of Two Dimensional Electron Gas Probed By Two Dimensional Fourier Transform Spectroscopy, Jagannath Paul

USF Tampa Graduate Theses and Dissertations

Advent of ultrashort lasers made it possible to probe various scattering phenomena in materials that occur in a time scale on the order of few femtoseconds to several tens of picoseconds. Nonlinear optical spectroscopy techniques, such as pump-probe, transient four wave mixing (TFWM), etc., are very common to study the carrier dynamics in various material systems. In time domain, the transient FWM uses several ultrashort pulses separated by time delays to obtain the information of dephasing and population relaxation times, which are very important parameters that govern the carrier dynamics of materials. A recently developed multidimensional nonlinear optical spectroscopy is …