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Articles 1 - 12 of 12
Full-Text Articles in Physical Sciences and Mathematics
Using Environmental Dna Methods For Estimating Juvenile Chinook Salmon Abundance, Jacqueline Marie Bridegum
Using Environmental Dna Methods For Estimating Juvenile Chinook Salmon Abundance, Jacqueline Marie Bridegum
Cal Poly Humboldt theses and projects
In the Central Valley of California, stocks of Chinook Salmon are declining, and two out of the four ecotypes of Chinook Salmon within the Sacramento River system are federally listed. A monitoring network has been developed to estimate the abundances of downstream migrating Chinook Salmon smolts, but there is high uncertainty in these estimates due to low catch rates. Environmental DNA (eDNA) monitoring, which involves capture of genetic material that organisms release into their surrounding environment, has shown promise for estimating abundance of salmonids and could complement existing monitoring efforts and potentially reduce uncertainty in abundance estimates. This research project …
Food Waste Storage Gaseous Emissions Detection And Quantification Using Infrared Spectroscopy, Ryley A. Burton-Tauzer
Food Waste Storage Gaseous Emissions Detection And Quantification Using Infrared Spectroscopy, Ryley A. Burton-Tauzer
Cal Poly Humboldt theses and projects
A growing interest in sustainable waste management and the implementation of new policies have prompted a shift towards alternative resource recovery methods for organic waste, including food waste. To effectively assess alternative food waste treatment scenarios, it is important to evaluate the life cycle impacts associated with each scenario. The storage phase of food waste, encompassing its accumulation in kitchens, and storage in bins for collection and transportation, has been overlooked as a source of greenhouse gases in previous studies. This investigation aimed to identify the greenhouse gases emitted during the initial five-day period of low-oxygen storage. An open dynamic …
Comparing Molecular Methods To Estimate Fish Stomach Contents And Gastric Evacuation Rates: Implications For Measuring The Impacts Of Predation On Central Valley Chinook Salmon, Cory M. Dick
Cal Poly Humboldt theses and projects
Juvenile Chinook Salmon (Oncorhynchus tshawytscha) migrating through the Sacramento – San Joaquin Delta (the Delta) in central California have higher mortality rates than salmonids migrating through other west coast estuaries. Some hypotheses for high mortality rates include entrainment into water export facilities, physical alterations of the river system, and predation. Of these factors, predation is considered the least understood but may have the largest impact. Predation from large populations of non-native piscivorous fishes in the Delta is believed to effect abundances of Central Valley Chinook salmon, however sufficient data supporting this hypothesis is scarce. In this study, I …
Resolving Variability In Size Structure In An Individual-Based Model For The North Pacific Krill, Euphausia Pacifica, Roxanne Robertson
Resolving Variability In Size Structure In An Individual-Based Model For The North Pacific Krill, Euphausia Pacifica, Roxanne Robertson
Cal Poly Humboldt theses and projects
Individual-based models (IBMs) have emerged as a powerful tool for ecological research and are particularly well suited to studies of plankton ecology. In this thesis, I develop an IBM for the North Pacific krill, Euphausia pacifica, with the goal of replicating observed variability in size-structure in the northern California Current Ecosystem. Krill, and E. pacifica in particular, are central to the structure and function of the California Current Ecosystem. Their response to environmental forcing translates climate variability to higher trophic levels and underpins broader ecosystem responses. Recent observations indicate environmental and climate-related shifts in E. pacifica size distributions, which …
Response Of Coastal Ichthyoplankton Assemblages Off Northern California To Seasonal Oceanographic And Climate Variability, Blair M. Winnacott
Response Of Coastal Ichthyoplankton Assemblages Off Northern California To Seasonal Oceanographic And Climate Variability, Blair M. Winnacott
Cal Poly Humboldt theses and projects
This study analyzed samples collected along the Trinidad Head Line (41°N) to characterize variability in the ichthyoplankton assemblage in coastal waters off northern California from late 2007 through 2019, a period during which a major marine heatwave (MHW; late 2014-16) strongly perturbed the ecosystem. I augmented visual identification with genetic techniques to resolve the species composition of visually cryptic larval rockfishes (Sebastes spp.). While taxonomic composition off northern California was largely similar to studies off Oregon and Washington, and cross-shelf structure and seasonal patterns in species’ abundance were generally consistent with the distribution and phenology of parental stocks, interannual …
Changes In Prey Mortality: The Efects Of Multiple Predators And Temperature On California Mussels, Wesley Hull
Changes In Prey Mortality: The Efects Of Multiple Predators And Temperature On California Mussels, Wesley Hull
Cal Poly Humboldt theses and projects
Organisms serve as prey to a variety of predators within natural systems, detecting threats through physical and chemical means. While predator feeding behavior is also affected by the presence of other predators, it is unclear whether differing modes of detection have similar effects on predator feeding behavior. In rocky intertidal zones in northern California, the California mussel (Mytilus californianus) is a competitively dominant foundation species consumed by a variety of predators. I quantified the individual and combined effects of ochre star (Pisaster ochraceus) and rock crab (Romaleon antennarium) predation on mussels by implementing mussel …
Spatial And Temporal Genetic Structure Of Winter-Run Steelhead (Oncorhynchus Mykiss) Returning To The Mad River, California, Steven R. Fong
Spatial And Temporal Genetic Structure Of Winter-Run Steelhead (Oncorhynchus Mykiss) Returning To The Mad River, California, Steven R. Fong
Cal Poly Humboldt theses and projects
Distinct populations of steelhead in the wild are in decline. The propagation of steelhead in hatcheries has been used to boost population numbers for recreational fisheries and for use in conservation. However, hatchery breeding practices of steelhead can result in changes in genetic structure. I investigated the genetic structure of winter-run steelhead (Oncorhynchus mykiss) returning to the Mad River, California, where a hatchery has been used enhance production for recreational fisheries since 1971. Genetic variability in Mad River steelhead was evaluated using 96 single nucleotide polymorphisms (SNPs) among 4203 individuals, including the Mad River and nearby locations, and …
Species Distribution Models For Three Deep-Sea Coral And Sponge Taxa In The Southern California Bight, Nissa Kreidler
Species Distribution Models For Three Deep-Sea Coral And Sponge Taxa In The Southern California Bight, Nissa Kreidler
Cal Poly Humboldt theses and projects
Deep-Sea Coral and Sponge (DSCS) species are signature taxa of deep-water habitats, however understanding the ecological mechanisms that drive their geographic distributions can be difficult to uncover due to the challenges of surveying deep-water ecosystems. A recent study on benthic assemblages in Southern California revealed statistical associations between several DSCS and demersal fishes, many of which are important to management agencies due to commercial or conservation concerns. Maps that predict where these DSCS may occur are needed for the management and protection of these DSCS taxa and the fauna that rely on them for habitat. In this thesis, I develop …
Spatial Variability In Recruitment Of Chilipepper Rockfish (Sebastes Goodei) In The California Current System, Laura K. Solinger
Spatial Variability In Recruitment Of Chilipepper Rockfish (Sebastes Goodei) In The California Current System, Laura K. Solinger
Cal Poly Humboldt theses and projects
Properly describing variability in population dynamics (e.g., growth, fecundity, recruitment) is expected to improve management of important fisheries stocks (Maunder & Piner, 2014). As recruitment to most fish stocks is determined during early life history stages (Houde, 1997; Iles & Beverton, 2000), and early life history stages are influenced by oceanographic conditions (Bjorkstedt et al. 2002; Laidig, 2010), understanding how environmental stochasticity influences recruitment deviations has potential to improve estimates of stock productivity and how productivity might change over time to support more effective management. Chilipepper Rockfish (Sebastes goodei) are an important commercial species that is managed as …
Exploring Community Knowledge And Perceptions Of Flooding And Sea-Level Rise In King Salmon, California, Kristina Kunkel
Exploring Community Knowledge And Perceptions Of Flooding And Sea-Level Rise In King Salmon, California, Kristina Kunkel
Cal Poly Humboldt theses and projects
The coastal community of King Salmon, California could be at the highest risk of relative sea-level rise on the entire U.S. West Coast. In 2019, the community already experiences severe flooding at least annually and may be regularly inundated as early as 2050. Until this study, there had been no documented effort to reach out to the community to show them future sea-level rise projections, understand the context of life in King Salmon, and listen to their reactions and perceptions. This research utilized a mixed methods grounded theory approach integrating semi-structured interviews with King Salmon stakeholders, qualitative data analysis, public …
Persistence Of Stream Restoration With Large Wood, Redwood National And State Parks, California, Diedra L. Rodriguez
Persistence Of Stream Restoration With Large Wood, Redwood National And State Parks, California, Diedra L. Rodriguez
Cal Poly Humboldt theses and projects
The conservation and recovery of anadromous salmonids (Oncorhynchus sp.) depend on stream restoration and protection of freshwater habitats. In-stream large wood dictates channel morphology, increases retention of terrestrial inputs such as organic matter, nutrients and sediment, and enhances the quality of fish habitat. Historic land use/land cover changes have resulted in aquatic systems devoid of large wood. Restoration by placement of large wood jams is intended to restore physical and biological processes. An important question for scientists and restoration managers, in addition to the initial effectiveness of restoration, is the persistence and fate of large wood installations. In this …
Juvenile Survival And Adult Return As A Function Of Freshwater Rearing Life History For Coho Salmon In The Klamath River Basin, Molly Gorman
Juvenile Survival And Adult Return As A Function Of Freshwater Rearing Life History For Coho Salmon In The Klamath River Basin, Molly Gorman
Cal Poly Humboldt theses and projects
The Scott and Shasta rivers, Klamath River tributaries, experience spatial disparity in habitat quality in spring and summer as a result of historical and current land-use. Juvenile Coho Salmon (Oncorhynchus kisutch) born in the upper tributary reaches often rear in natal streams before migrating to sea. However, those born in the lower reaches often encounter unsuitable habitat and emigrate during their first spring to seek non-natal rearing habitats. It is assumed that these early outmigrants are population losses. This study evaluated first-summer survival, and contribution to the adult population, of non-natal rearing juveniles in the Klamath River Basin. …