Physical Sciences and Mathematics Commons^™

Along-Shelf Connectivity And Circumpolar Gene Flow In Antarctic Silverfish (Pleuragramma Antarctica), Jilda Alicia Caccavo, Chiara Papetti, Maj Wetjen, Rainer Knust, Julian R. Ashford, Lorenzo Zane

OES Faculty Publications

The Antarctic silverfish (Pleuragramma antarctica) is a critically important forage species with a circumpolar distribution and is unique among other notothenioid species for its wholly pelagic life cycle. Previous studies have provided mixed evidence of population structure over regional and circumpolar scales. The aim of the present study was to test the recent population hypothesis for Antarctic silverfish, which emphasizes the interplay between life history and hydrography in shaping connectivity. A total of 1067 individuals were collected over 25 years from different locations on a circumpolar scale. Samples were genotyped at fifteen microsatellites to assess population differentiation and …

A Deep Eastern Equatorial Pacific Thermocline During The Last Glacial Maximum, H. L. Ford, C. L. Mcchesney, J. E. Hertzberg, J. F. Mcmanus

OES Faculty Publications

The mean state and variability of the tropical Pacificis influenced by the depth of the thermocline. During the Last Glacial Maximum (~21,000 years ago), the zonal sea surface temperature gradient across the equatorial Pacific was reduced and productivity was generally lower than modern. To understand the thermocline depth’s role in determining the Last Glacial Maximum tropical mean state, we reconstruct the upper ocean δ¹⁸O profile from multiple species of planktic foraminifera. We synthesize existing records of surface and subsurface dwelling foraminifera to reconstruct the vertical δ¹⁸O gradient throughout the eastern equatorial Pacific. We find the thermocline …

Reconstruction Of Sea Level Around The Korean Peninsula Using Cyclostationary Empirical Orthogonal Functions, Se-Hyeon Cheon, Benjamin D. Hamlington, Kyung-Duck Suh

OES Faculty Publications

Since the advent of the modern satellite altimeter era, the understanding of the sea level has increased dramatically. The satellite altimeter record, however, dates back only to the 1990s. The tide gauge record, on the other hand, extends through the 20th century but with poor spatial coverage when compared to the satellites. Many studies have been conducted to create a dataset with the spatial coverage of the satellite datasets and the temporal length of the tide gauge records by finding novel ways to combine the satellite data and tide gauge data in what is known as sea level reconstruction. However, …

Plastics And Microplastics As Vectors For Bacteria And Human Pathogens, Amanda Lee Laverty

OES Theses and Dissertations

Since plastics degrade very slowly, they remain in the environment on much longer timescales than most natural substrates and can thus provide a novel habitat for colonization by bacterial communities. The full spectrum of relationships between plastics and bacteria, however, is little understood. The objective of this study was to examine marine plastic pollution as a substrate for bacteria, with particular focus on Vibrio spp., including the human pathogens, Vibrio cholerae, Vibrio parahaemolyticus, and Vibrio vulnificus.

Colonization experiments were set up in a tributary of the lower Chesapeake Bay to follow Vibrio spp. colonization and …

Advances In Amino Acid Analysis For Marine Related Matrices And Its Application To Coastal Shelf Settings In The Canadian Arctic, Rachel M. Mcmahon

OES Theses and Dissertations

Amino acids comprise up to 50% of organic matter in cellular material and are a major fraction of oceanic organic carbon. Amino acids are also considered highly labile during organic matter recycling, making them useful proxies for organic carbon cycling. Nevertheless, analysis of individual amino acids has been burdened by lengthy derivatization and complex analysis since the 1950s. In this thesis, I describe the modification of advanced analytical techniques, developed in the biomedical field, for analysis of marine matrices which allow the determination of at least 40 amino acids without the need for lengthy sample preparation and derivatization, twice the …

Ms Analysis Of A Dilution Series Of Bacteria: Phytoplankton To Improve Detection Of Low Abundance Bacterial Peptides, Emma Timmins-Schiffman, Molly P. Mikan, Ying Sonia Ting, H. Rodger Harvey, Brook L. Nunn

OES Faculty Publications

Assigning links between microbial activity and biogeochemical cycles in the ocean is a primary objective for ecologists and oceanographers. Bacteria represent a small ecosystem component by mass, but act as the nexus for both nutrient transformation and organic matter recycling. There are limited methods to explore the full suite of active bacterial proteins largely responsible for degradation. Mass spectrometry (MS)-based proteomics now has the potential to document bacterial physiology within these complex systems. Global proteome profiling using MS, known as data dependent acquisition (DDA), is limited by the stochastic nature of ion selection, decreasing the detection of low abundance peptides. …

Description And Mechanisms Of The Mid-Year Upwelling In The Southern Caribbean Sea From Remote Sensing And Local Data, Digna T. Rueda-Roa, Tal Ezer, Frank E. Muller-Karger

CCPO Publications

The southern Caribbean Sea experiences strong coastal upwelling between December and April due to the seasonal strengthening of the trade winds. A second upwelling was recently detected in the southeastern Caribbean during June-August, when local coastal wind intensities weaken. Using synoptic satellite measurements and in situ data, this mid-year upwelling was characterized in terms of surface and subsurface temperature structures, and its mechanisms were explored. The mid-year upwelling lasts 6-9 weeks with satellite sea surface temperature (SST) ~1-2°C warmer than the primary upwelling. Three possible upwelling mechanisms were analyzed: cross-shore Ekman transport (csET) due to alongshore winds, wind curl (Ekman …

Developing A Framework To Identify Local Business And Government Vulnerability To Sea-Level Rise: A Case Study Of Coastal Virginia, Sarah L. Stafford, Alexander D. Renaud

May 11, 2018: Adaptation Policy

In this paper we develop methods for identifying local business and government vulnerabilities to sea-level rise and the natural hazards associated with it. Unlike the fairly large literature on measuring social vulnerability to natural hazards, there are very few papers that discuss methods for measuring local business or local government vulnerability even though businesses and governments are also differentially affected natural hazards. Our goal is to create measures that are easily replicable using readily available data and that are easy to explain to local planners, policy makers, and citizens. We implement our measures of local business and government vulnerability for …

Light Availability And Phytoplankton Growth Beneath Arctic Sea Ice: Integrating Observations And Modeling, Victoria J. Hill, Bonnie Light, Michael Steele, Richard C. Zimmerman

OES Faculty Publications

Observations of the seasonal light field in the upper Arctic Ocean are critical to understanding the impacts of changing Arctic ice conditions on phytoplankton growth in the water column. Here we discuss data from a new sensor system, deployed in seasonal ice cover north‐east of Utqiaġvik, Alaska in March 2014. The system was designed to provide observations of light and phytoplankton biomass in the water column during the formation of surface melt ponds and the transition from ice to open water. Hourly observations of downwelling irradiance beneath the ice (at 2.9, 6.9, and 17.9 m depths) and phytoplankton biomass (at …

Biogeochemical Cycling Of Selenium In The Arctic Ocean, Kyle M. Mcquiggan

OES Theses and Dissertations

Changes in the global climate may have a pronounced effect on the biogeochemical cycling of trace elements like selenium (Se) in the Arctic Ocean. This study described the first quantitative examination of the biogeochemical cycle of selenium in the Amerasian Basin, providing the baseline from which future changes can be identified. Aerosol, dissolved and particulate water samples were collected for Se determinations during the U.S. GEOTRACES GN01 Arctic expedition that sampled the two parts of the Amerasian Basin in 2015: The Makarov Basin on the way to the North Pole and the Canada Basin on the return trip to Dutch …

Assessing Phytoplankton Nutritional Status And Potential Impact Of Wet Deposition In Seasonally Oligotrophic Waters Of The Mid-Atlantic Bight, P. N. Sedwick, P. W. Bernhardt, M. R. Mulholland, R. G. Najjar, L. M. Blumen, B. M. Sohst, C. Sookhdeo, Brittany Widner

OES Faculty Publications

To assess phytoplankton nutritional status in seasonally oligotrophic waters of the southern Mid-Atlantic Bight, and the potential for rain to stimulate primary production in this region during summer, shipboard bioassay experiments were performed using natural seawater and phytoplankton collected north and south of the Gulf Stream. Bioassay treatments comprised iron, nitrate, iron + nitrate, iron + nitrate + phosphate, and rainwater. Phytoplankton growth was inferred from changes in chlorophyll a, inorganic nitrogen, and carbon-13 uptake, relative to unamended control treatments. Results indicated the greatest growth stimulation by iron + nitrate + phosphate, intermediate growth stimulation by rainwater, modest growth …

Comparison Of A Simplified Cupric Oxide Oxidation Hplc Method With The Traditional Gc-Ms Method For Characterization Of Lignin Phenolics In Environmental Samples (Vol 13, Pg 1, 2015), Luni Sun, Robert G. M. Spencer, Peter J. Hernes, Rachael Y. Dyda, Kenneth Mopper

Chemistry & Biochemistry Faculty Publications

In our article entitled “Comparison of a simplified cupric oxide oxidation HPLC method with the traditional GC-MS method for characterization of lignin phenolics in environmental samples” (Limnol. Oceanogr.: Methods 13, 2015, 1–52), doi: 10.1002/lom3.10001, we would like to correct the errors in Fig. 2 and Table 2 as mentioned below. The label to Fig. 2(a) needs to be transposed as indicated in the corrected Fig. 2 image below.

Carbon Budget Of Tidal Wetlands, Estuaries, And Shelf Waters Of Eastern North America, R. G. Najjar, M. Herrmann, R. Alexander, D. J. Burdige, D. Butman, W.-J. Cai, E. A. Canuel, R. F. Chen, M. A. M. Friedrichs, M. R. Mulholland

OES Faculty Publications

Carbon cycling in the coastal zone affects global carbon budgets and is critical for understanding the urgent issues of hypoxia, acidification, and tidal wetland loss. However, there are no regional carbon budgets spanning the three main ecosystems in coastal waters: tidal wetlands, estuaries, and shelf waters. Here we construct such a budget for eastern North America using historical data, empirical models, remote sensing algorithms, and process‐based models. Considering the net fluxes of total carbon at the domain boundaries, 59 ± 12% (± 2 standard errors) of the carbon entering is from rivers and 41 ± 12% is from the atmosphere, …

Effects Of Projected Changes In Wind, Atmospheric Temperature, And Freshwater Inflow On The Ross Sea, Michael S. Dinniman, John M. Klinck, Eileen E. Hofmann, Walker O. Smith Jr.

CCPO Publications

A 5-km horizontal resolution regional ocean-sea ice-ice shelf model of the Ross Sea is used to examine the effects of changes in wind strength, air temperature, and increased meltwater input on the formation of high-salinity shelf water (HSSW), on-shelf transport and vertical mixing of Circumpolar Deep Water (CDW) and its transformation into modified CDW (MCDW), and basal melt of the Ross Ice Shelf (RIS). A 20% increase in wind speed, with no other atmospheric changes, reduced summer sea ice minimum area by 20%, opposite the observed trend of the past three decades. Increased winds with spatially uniform, reduced atmospheric temperatures …

Editorial-The 8th International Workshop On Modeling The Ocean (Iwmo 2016) In Bologna, Italy, June 7-10, 2016, Tal Ezer, Lie-Yauw Oey, Huijie Xue, Marco Zavatarelli, Gianmaria Sannino, Ricardo De Camargo

CCPO Publications

The 8th International Workshop on Modeling the Ocean (IWMO 2016) was held on June 7–10, 2016, at one of the oldest universities in Europe—the University of Bologna in Italy (founded 1088 A.D.). The workshop returned to Europe for the second time (the other European IWMO was held in Norway in 2013; Berntsen et al. 2014). Since the establishment of the IWMO in 2009 (Oey et al. 2010a, b), meetings were held four times in Asia, two times in Europe, two times in North America, one time in Australia, and for the 10th anniversary of IWMO, the 2018’s meeting will be …

Global Sea-Level Budget 1993-Present, Wcrp Global Sea Level Budget Group, Benjamin Hamlington

CCPO Publications

Global mean sea level is an integral of changes occurring in the climate system in response to unforced climate variability as well as natural and anthropogenic forcing factors. Its temporal evolution allows changes (e.g.,acceleration) to be detected in one or more components. Study of the sea-level budget provides constraints on missing or poorly known contributions, such as the unsurveyed deep ocean or the still uncertain land water component. In the context of the World Climate Research Programme Grand Challenge entitled "Regional Sea Level and Coastal Impacts", an international effort involving the sea-level community worldwide has been recently initiated with the …

Composition Of Dissolved Organic Matter In Pore Waters Of Anoxic Marine Sediments Analyzed By 1h Nuclear Magnetic Resonance Spectroscopy, Christina A. Fox, Hussain A. Abdulla, David J. Burdige, James P. Lewicki, Tomoko Komada

OES Faculty Publications

Marine sediments are globally significant sources of dissolved organic matter (DOM) to the oceans, but the biogeochemical role of pore-water DOM in the benthic and marine carbon cycles remains unclear due to a lack of understanding about the molecular composition of DOM. To help fill this knowledge gap, we used 1H nuclear magnetic resonance (NMR) spectroscopy to examine depth variability in the composition of pore-water DOM in anoxic sediments of Santa Barbara Basin, California Borderland. Proton detected spectra were acquired on whole samples without pre-concentration to avoid preclusion of any DOM components from the analytical window. Broad unresolved resonance (operationally …

The Biogeochemical Cycling Of Iron, Copper, Nickel, Cadmium, Manganese, Cobalt, Lead, And Scandium In A California Current Experimental Study, Travis Mellett, Matthew T. Brown, P. Dreux Chappell, Carolyn Duckham, Jessica N. Fitzsimmons, Claire P. Till, Robert M. Sherrell, Maria T. Maldonado, Kristen N. Buck

OES Faculty Publications

A 3-day shipboard incubation experiment was conducted in the California Current System in July 2014 to investigate the cycling of iron (Fe), copper (Cu), nickel (Ni), cadmium (Cd), manganese (Mn), cobalt (Co), lead (Pb), and scandium (Sc) under a range of light and particle conditions. Filtered (< 0.2 μm) and unfiltered treatments were incubated under the following light conditions: Dark, light (“UV”), and light without the ultraviolet (UV) wavelengths (“noUV”). The experiment was sampled for carbon and Fe uptake rates, dissolved trace metal concentrations (Fe, Cu, Ni, Cd, Mn, Co, Pb, Sc), Fe and Cu speciation, size-fractionated concentrations of Cd and Fe, and diatom community composition from DNA sequencing. Exposure to UV light increased phytoplankton Fe uptake in the first 24 h of the incubation relative to the noUV treatment, suggesting that a fraction of the ambient ligand-bound Fe was photoreactive. Fe-binding organic ligand production was observed in the unfiltered light treatments in association with increasing chlorophyll a, and evidence for Cu-binding ligand production in these treatments was also observed. Biological uptake of Cd and Co was observed along with scavenging of dissolved Pb. Manganese appeared to be rapidly oxidized by Mn-oxidizing bacteria with concomitant drawdown of dissolved Ni. Scandium displayed similar trends to Fe, reinforcing the limited observations …

Observation-Driven Estimation Of The Spatial Variability Of 20th Century Sea Level Rise, B. D. Hamlington, A. Burgos, P. R. Thompson, F. W. Landerer, C. G. Piecuch, S. Adhikari, L. Caron, J. T. Reager, E. R. Ivins

OES Faculty Publications

Over the past two decades, sea level measurements made by satellites have given clear indications of both global and regional sea level rise. Numerous studies have sought to leverage the modern satellite record and available historic sea level data provided by tide gauges to estimate past sea level rise, leading to several estimates for the 20^th century trend in global mean sea level in the range between 1 and 2 mm/yr. On regional scales, few attempts have been made to estimate trends over the same time period. This is due largely to the inhomogeneity and quality of the tide …

Expected Limits On The Ocean Acidification Buffering Potential Of A Temperate Seagrass Meadow, David A. Koweek, R. C. Zimmerman, Kathryn M. Hewett, Brian Gaylord, Sarah N. Giddings, Kerry J. Nickols, Jennifer L. Ruesink, John J. Stachowicz, Yuichiro Takeshita, Ken Caldeira

OES Faculty Publications

Ocean acidification threatens many marine organisms, especially marine calcifiers. The only global‐scale solution to ocean acidification remains rapid reduction in CO₂ emissions. Nevertheless, interest in localized mitigation strategies has grown rapidly because of the recognized threat ocean acidification imposes on natural communities, including ones important to humans. Protection of seagrass meadows has been considered as a possible approach for localized mitigation of ocean acidification due to their large standing stocks of organic carbon and high productivity. Yet much work remains to constrain the magnitudes and timescales of potential buffering effects from seagrasses. We developed a biogeochemical box model to …

Perspectives On Chemical Oceanography In The 21st Century: Participants Of The Come Aboard Meeting Examine Aspects Of The Field In The Context Of 40 Years Of Disco, Andrea J. Fassbender, Hilary I. Palevsky, Todd R. Martz, Anitra E. Ingalls, Martha Gledhill, Sarah E. Fawcett, Jay A. Brandes, Lihini I. Aluwihare, The Participants Of Come Aboard, Disco Xxv

OES Faculty Publications

The questions that chemical oceanographers prioritize over the coming decades, and the methods we use to address these questions, will define our field's contribution to 21st century science. In recognition of this, the U.S. National Science Foundation and National Oceanic and Atmospheric Administration galvanized a community effort (the Chemical Oceanography MEeting: A BOttom-up Approach to Research Directions, or COME ABOARD) to synthesize bottom-up perspectives on selected areas of research in Chemical Oceanography. Representing only a small subset of the community, COME ABOARD participants did not attempt to identify targeted research directions for the field. Instead, we focused on how best …

Corrigendum: Composition Of Dissolved Organic Matter In Pore Waters Of Anoxic Marine Sediments Analyzed By 1h Nuclear Magnetic Resonance Spectroscopy, Christina A. Fox, Hussain A. Abdulla, David J. Burdige, James P. Lewicki, Tomoko Komada

OES Faculty Publications

No abstract provided.

Climate-Change-Driven Accelerated Sea-Level Rise Detected In The Altimeter Era, R. S. Nerem, B. D. Beckley, J. T. Fasullo, B. D. Hamlington, D. Masters, G. T. Mitchum

CCPO Publications

Using a 25-y time series of precision satellite altimeter data from TOPEX/Poseidon, Jason-1, Jason-2, and Jason-3, we estimate the climate-change-driven acceleration of global mean sea level over the last 25 y to be 0.084 ± 0.025 mm/y². Coupled with the average climate-change-driven rate of sea level rise over these same 25 y of 2.9 mm/y, simple extrapolation of the quadratic implies global mean sea level could rise 65 ± 12 cm by 2100 compared with 2005, roughly in agreement with the Intergovernmental Panel on Climate Change (IPCC) 5th Assessment Report (AR5) model projections.

Ocean Circulation Causes Strong Variability In The Mid-Atlantic Bight Nitrogen Budget, Marjorie A.M. Friedrichs, Pierre St-Laurent, Yongjin Xiao, Eileen Hofmann, Kimberly Hyde, Antonio Mannino, Raymond G. Najjar, Diego A. Narváez, Sergio R. Signorini, Hanqin Tian, John Wilkin, Yuanzhi Yao, Jianhong Xue

CCPO Publications

Understanding of nitrogen cycling on continental shelves, a critical component of global nutrient cycling, is hampered by limited observations compared to the strong variability on a wide range of time and space scales. Numerical models have the potential to partially alleviate this issue by filling spatiotemporal data gaps and hence resolving annual area-integrated nutrient fluxes. In this study, a three-dimensional biogeochemical-circulation model was implemented to simulate the Mid-Atlantic Bight (MAB) nitrogen budget. Model results demonstrate that, on average, MAB net community production (NCP) was positive (+0.27 Tg N/year), indicating net autotrophy. Interannual variability in NCP was strong, with annual values …

Urban Areas In Coastal Zones, Richard C. Dawson, M. Shah Alam Khan, Vivien Gornitz, Maria Fernanda Lemos, Larry Atkinson, Julie Pullen, Juan Camilo Osorio, Lindsay Usher, Cynthia Rosenzweig (Ed.), William Solecki (Ed.), Patricia Romero-Lankao (Ed.), Shagun Mehrotra (Ed.), Shobhakar Dhakal (Ed.), Somayya Ali Ibrahim (Ed.)

CCPO Publications

[First Paragraph] Coastal cities have been subjected to extreme weather events since the onset of urbanization. Climatic change, in particular sea level rise, coupled with rapid urban development are amplifying the challenge of managing risks to coastal cities. Moreover, urban expansion and changes and intensification in land use further pressure sensitive coastal environments through pollution and habitat loss.

Interpreting Mosaics Of Ocean Biogeochemistry, Andrea Fassbender, A. Bourbonnais, Sophie Clayton, P. Gaube, M. Ormand, P.J.S. Franks, M. A. Altabet, D.J. Mcgillicuddy Jr.

OES Faculty Publications

Advances in technology and modeling capabilities are driving a surge in progress in our understanding of how ocean ecosystems mix and mingle on medium to small scales.

Modeling The Impacts Of Sea Level Rise On Storm Surge Inundation In Flood-Prone Urban Areas Of Hampton Roads, Virginia, Luca Castrucci, Navid Tahvildari

Civil & Environmental Engineering Faculty Publications

Hampton Roads is a populated area in the United States Mid-Atlantic region that is highly affected by sea level rise (SLR). The transportation infrastructure in the region is increasingly disrupted by storm surge and even minor flooding events. The purpose of this study is to improve our understanding of SLR impacts on storm surge flooding in the region. We develop a hydrodynamic model to study the vulnerability of several critical flood-prone neighborhoods to storm surge flooding under several SLR projections. The hydrodynamic model is validated for tide prediction, and its performance in storm surge simulation is validated with the water …

Regional Sea Level Rise Along The United States Coasts, Alessandra G. Burgos

OES Theses and Dissertations

Over the past several years, there has been several studies focused on reconstructing global mean sea level (GMSL) for the 20th century, along with projecting rates out into the future. Of greater importance for mitigation and adaptation plans, however, is the rate of local or regional sea level (RSL) rise. Ocean dynamics along with changes in Earth’s gravitational field can cause RSL to deviate from the change in GMSL. During the satellite altimeter era covering the past two decades, RSL trends can be four times the global average, with much of this spatial variation due to internal climate variability. Isolating …

Wet And Dry Atmospheric Deposition Of Nutrients And Bioactive Trace Metals To Coastal Waters Of The Mid-Atlantic Bight, Christine Sookhdeo

OES Theses and Dissertations

Atmospheric deposition provides a significant source of nutrients and bioactive trace metals to the surface ocean, including the seasonally oligotrophic waters of the Mid-Atlantic Bight. These atmospherically derived nutrients and trace metals enter the surface ocean via dry deposition of aerosols and wet deposition in rain. To estimate the aeolian input of nutrients and trace metals to coastal waters east of the Delmarva Peninsula, wet and dry atmospheric deposition samples were collected over a one-year time series at the Anheuser-Busch Coastal Research Center, Oyster, Virginia. Weekly composite samples were collected from May 2014 through June 2015. Nutrient species examined were …