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Physical Sciences and Mathematics Commons

Open Access. Powered by Scholars. Published by Universities.®

Mathematics

2008

Mathematics Theses

Cross-validation

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Infrared Spectroscopy In Combination With Advanced Statistical Methods For Distinguishing Viral Infected Biological Cells, Tian Tang Nov 2008

Infrared Spectroscopy In Combination With Advanced Statistical Methods For Distinguishing Viral Infected Biological Cells, Tian Tang

Mathematics Theses

Fourier Transform Infrared (FTIR) microscopy is a sensitive method for detecting difference in the morphology of biological cells. In this study FTIR spectra were obtained for uninfected cells, and cells infected with two different viruses. The spectra obtained are difficult to discriminate visually. Here we apply advanced statistical methods to the analysis of the spectra, to test if such spectra are useful for diagnosing viral infections in cells. Logistic Regression (LR) and Partial Least Squares Regression (PLSR) were used to build models which allow us to diagnose if spectral differences are related to infection state of the cells. A three-fold, …