Physical Sciences and Mathematics Commons^™

Automatic Reaction To A Chemical Event Detected By A Low-Cost Wireless Chemical Sensing Network, Stephen Beirne, King Tong Lau, Brian Corcoran, Dermot Diamond

Faculty of Science - Papers (Archive)

A test-scale wireless chemical sensor network (WCSN) has been deployed within a controlled Environmental Chamber (EC). The combined signals from the WCSN were used to initiate a controllable response to the detected chemical event. When a particular sensor response pattern was obtained, a purging cycle was initiated. Sensor data were continuously checked against user-defined action limits, to determine if a chemical event had occurred. An acidic contaminant was used to demonstrate the response of the sensor network. Once the acid plume was simultaneously detected by a number of wireless chemical sensor nodes, an automatic response action, which was the purging …

The 4 X 4 Semantic Model: Exploiting Data, Functional, Non-Functional And Execution Semantics Across Business Process, Workflow, Partner Services And Middleware Services Tiers, Amit P. Sheth, Karthik Gomadam

Kno.e.sis Publications

Business processes in the global environment increasingly encompass multiple partners and complex, rapidly changing requirements. In this context it is critical that strategic business objectives align with and map accurately to systems that support flexible and dynamic business processes. To support the demanding requirements of global business processes, we propose a comprehensive, unifying 4 X 4 Semantic Model that uses Semantic Templates to link four tiers of implementation with four types of semantics. The four tiers are the Business Process Tier, the Workflow Enactment Tier, the Partner Services Tier, and the Middleware Services Tier. The four types of semantics are …

Lake Mead National Recreation Area Monitoring And Evaluation Of Sensitive Wildlife: Quarterly Progress Report, Period Ending December 31, 2008, Margaret N. Rees

Wildlife Monitoring

Project 1. Relict Leopard Frog Monitoring, Management, and Research

• All milestones and deliverables associated with the MSHCP project are on schedule
• Completion of 2008 monitoring survey efforts
• Coordination is ongoing to identify potential translocation sites, including assisting efforts to identify a potential site in the western Grand Canyon
• RLFCT meeting hosted and minutes of meeting drafted
• Annual report provided to RLFCT, final draft in review
• Sampling for the amphibian chytrid fungus conducted at many sites

Project 2. Bald Eagle Winter Monitoring and Evaluation

• All MSHCP milestones and deliverables are on schedule
• Planning and coordination of the 2009 Eagle Count conducted …

Limnological Assistance For The Lake Mead National Recreation Area In Meeting The Challenge Of The Water 2025 Initiative: Quarterly Report, Period Ending December 31, 2008, Margaret N. Rees

Limnological Studies

Project 1: Technical input has been provided at four advisory team meetings attended this quarter.

Project 2: A formal report titled, Surface Water Monitoring for Indicator Bacteria in High-use Sites of the Lake Mead National Recreation Area, has been prepared; an accompanying poster presentation for the Lake Mead Science Symposium is in preparation.

Project 3: A draft document titled, “Interagency Monitoring Action Plan (I-MAP): Quagga Mussels in Lakes Mead and Mohave” has been presented to an interagency core group to review and input. Six oral presentations related to quagga mussels are in preparation by this group for the Lake Mead …

Laser-Induced Photon-Branched Chain Reaction In A Chemically-Active Gas-Dispersed Medium, Thomas George, Renat Letfullin, Galen Duree

Chemistry & Biochemistry Faculty Works

A promising avenue in the development of high-energy pulsed chemical HF/DF lasers and amplifiers is the utilization of a photon-branched chain reaction initiated in a two-phase active medium, that is, a medium containing a laser working gas and ultradispersed passivated metal particles. These particles are evaporated under the action of IR laser radiation which results in the appearance of free atoms, their diffusion into the gas, and the development of a photon-branching chain process, which involves photons as both reactants and products. The key obstacle here is the formation of a relatively large volume (in excess of 10^3 cm^3) of …

Structure And Dynamics Of Metalloproteins In Live Cells, Jeremy D. Cook, James E. Penner-Hahn, Timothy L. Stemmler

Biochemistry and Molecular Biology Faculty Publications

X-ray absorption spectroscopy (XAS) has emerged as one of the premier tools for investigating the structure and dynamic properties of metals in cells and in metal containing biomolecules. Utilizing the high flux and broad energy range of X-rays supplied by synchrotron light sources, one can selectively excite core electronic transitions in each metal. Spectroscopic signals from these electronic transitions can be used to dissect the chemical architecture of metals in cells, in cellular components and in biomolecules at varying degrees of structural resolution. With the development of ever-brighter X-ray sources, X-ray methods have grown into applications that can be utilized …

Semantic Sensor Web, Amit P. Sheth, Cory Henson, Krishnaprasad Thirunarayan

Kno.e.sis Publications

No abstract provided.

Capturing Workflow Event Data For Monitoring, Performance Analysis, And Management Of Scientific Workflows, Matthew Valerio, Satya S. Sahoo, Roger Barga, Jared Jackson

Kno.e.sis Publications

To effectively support real-time monitoring and performance analysis of scientific workflow execution, varying levels of event data must be captured and made available to interested parties. This paper discusses the creation of an ontology-aware workflow monitoring system for use in the Trident system which utilizes a distributed publish/subscribe event model. The implementation of the publish/subscribe system is discussed and performance results are presented.

Early Post-Fire Recovery On A Heavily Visited Mojave Desert Burn: Red Rock Canyon Near Las Vegas, Nevada, Scott R. Abella, E. Cayenne Engel, Christina L. Lund, Jessica E. Spencer

Fire Science Presentations

Wildfire has become widespread in southwestern USA deserts. In a record 2005 fire season in the Mojave Desert, for example, more than 385,000 hectares burned (Brooks and Matchett 2006). This burned area is approximately 3% of the entire Mojave Desert. Fueled in large part by exotic annual grasses, these fires burned desert ecosystems thought to have only burned infrequently historically. Burns now occupy significant portions of desert landscapes, posing prominent management challenges. Improving our understanding of plant recovery on desert burns is important for evaluating future fire hazard, whether natural revegetation will meet management objectives, and for planning active revegetation …

Using A Diverse Seed Mix To Establish Native Plants On A Sonoran Desert Burn, Scott R. Abella, John L. Gunn, Mark L. Daniels, Judith D. Springer, Susan E. Nyoka

Fire Science Presentations

• Revegetating burned areas is a formidable challenge facing resource managers in southwestern United States arid lands.
• Natural revegetation of desert burns by native species may be slow, or dominated by exotic annual grasses that perpetuate a frequent-fire regime.
• Resource managers may have several reasons for actively revegetating burns with native species, such as for providing competition with exotic species, minimizing soil erosion and dust pollution, and improving aesthetics.
• The use of native species in revegetation has been limited by a lack of available seed and by findings that native desert species are difficult to establish (e.g., Bainbridge and Virginia 1990, …

Post-Fire Plant Recovery In The Mojave And Sonoran Deserts Of Western North America, Scott R. Abella, Public Lands Institute, Department Of Environmental Studies, University Of Nevada, Las Vegas

Fire Science Presentations

Fire is thought to have been generally rare historically in the Mojave and Sonoran Deserts. However, invasion by exotic grasses (e.g., Schismus spp.) has increased fuel continuity, promoting fire in these deserts. Succession and recovery are not well understood processes in deserts, nonetheless for a novel disturbance like fire. In addition to helping build theories of desert succession and recovery, information on post-fire recovery has numerous practical implications (e.g., determining whether active revegetation is needed). Systematic reviews provide a means for obtaining literature using reproducible search criteria. This approach facilitates a balanced appraisal of available information, synthesizes scattered literature, and …

Three-Dimensional Microfluidic Devices Fabricated In Layered Paper And Tape, Andres W. Martinez, Scott T. Phillips, George M. Whitesides

Chemistry and Biochemistry

This article describes a method for fabricating 3D microfluidic devices by stacking layers of patterned paper and double-sided adhesive tape. Paper-based 3D microfluidic devices have capabilities in microfluidics that are difficult to achieve using conventional open-channel microsystems made from glass or polymers. In particular, 3D paper-based devices wick fluids and distribute microliter volumes of samples from single inlet points into arrays of detection zones (with numbers up to thousands). This capability makes it possible to carry out a range of new analytical protocols simply and inexpensively (all on a piece of paper) without external pumps. We demonstrate a prototype 3D …

On The Movement Of Beluga Whales In Cook Inlet, Alaska: Simulations Of Tidal And Environmental Impacts Using A Hydrodynamic Inundation Model, Tal Ezer, Roderick Hobbs, Lie-Yauw Oey

CCPO Publications

The population of beluga whales in Cook Inlet, Alaska, is in decline, and since 2000 these whales have been under consideration for designation as "endangered" under the Endangered Species Act (and were placed on the list in October 2008, just before this article went to press). In order to study environmental and hydrodynamic impacts on the belugas' movements and survival in the unique habitat of the inlet, a three-dimensional ocean circulation and inundation model is combined with satellite-tracked beluga whale data. Model-wale data comparisons from two whale paths during a five-day period (september 17-21, 2000) covering 10 tidal cycles suggest …

Lidar-Derived Benthic Habitat Maps Enable The Quantification Of Potential Dredging Impacts To Coral Reef Ecosystems, Brian K. Walker, Richard E. Dodge, David S. Gilliam

Marine & Environmental Sciences Faculty Proceedings, Presentations, Speeches, Lectures

An essential component to the analysis of ecosystem services is to characterize and define the major habitats within the area of interest. Aerial photography and/or satellite imagery coupled with geographic information systems (GIS) are frequently used to identify and quantify habitats in open terrestrial ecosystems. However, it is more difficult to successfully apply this methodology to deeper, <20 m, underwater environments. Light detection and ranging (LIDAR), a relatively new remote sensing technology that provides detailed bathymetry, can be used when adequate imagery is not available. This study uses LIDAR as the basis to characterize various benthic habitats in a coral reef ecosystem in order to quantify the habitats for a Habitat Equivalency Analysis (HEA) related to planned dredging activities to expand the Port Everglades entrance channel, Broward County, FL. As part of a regional mapping effort, marine benthic habitats were characterized for Broward County, FL. A mosaic of interpolated, sunshaded, laser bathymetry data served as the foundation upon which acoustic ground discrimination, limited subbottom profiling and aerial photography, and groundtruthing data were added in a GIS to aid in interpretation of benthic habitats. Expert-driven visual interpretation outlined geomorphological features in the LIDAR data at a scale of 1:6000 with a minimum mapping unit of 1 acre. The map of Broward County yielded a high overall accuracy of 89.6%. To quantify the potential dredging impacts, the habitat layer was clipped in GIS to the boundaries of anticipated direct and indirect impacts of the proposed project. Then the area of each clipped polygon was totaled for each habitat by impact type. HEA and Florida’s Uniform Mitigation Assessment Method (UMAM) were performed using these areas. This work would not have been possible using satellite imagery or aerial photography alone and illustrates the capability of relatively new remote sensing technologies to aid in the definition and quantification of habitats for ecosystem service analyses.

Effects Of Olfactory And Visual Predators On Nest Success And Nest-Site Selection Of Waterfowl In North Dakota, Jennifer Borgo

Green Canyon Environmental Research Area, Logan Utah

No abstract provided.

Preliminary Perspectives On The Health Needs Of Pastoral Women On The Borana Plateau Using Participatory Approaches, D. Layne Coppock, Seyoum Tezera, Solomon Desta

Environment and Society Faculty Publications

Since 2000, the PARIMA project has conducted participatory research and outreach among pastoralists in southern Ethiopia. This has led to notable achievements in terms of forming collective-action groups dominated by women, stimulation of sustainable micro-finance and micro-enterprise activities, and improving linkages of pastoral producers to livestock markets. Despite such gains, there are many other challenges to be addressed. One is poor human health. PARIMA researchers used participatory and qualitative methods to conduct a preliminary assessment of women’s health problems among members of six, well-established collective-action groups from the Borana and Gugi zones in the Oromia Regional State during 2008. Conventional …

Integrating Landscapes That Have Experienced Rural Depopulation And Ecological Homogenization Into Tropical Conservation Planning, Aerin L. Jacob, Ismael Vaccaro, Raja Sengupta, Joel N. Hartter, Colin A. Chapman

Geography

If current trends of declining fertility rates and increasing abandonment of rural land as a result of urbanization continue, this will signal a globally significant transformation with important consequences for policy makers interested in conservation planning. This transformation is presently evident in a number of countries and projections suggest it may occur in the future in many developing countries. We use rates of population growth and urbanization to project population trends in rural areas for 25 example countries. Our projections indicate a general decline in population density that has either occurred already (e.g., Mexico) or may occur in the future …

What Are Consumers In Moyale, Kenya Willing To Pay For Improved Milk Quality?, D. Layne Coppock, Francis O. Wayua, Mohamed G. Shibia, Moses S. Mamo

Environment and Society Faculty Publications

Pastoralists in northern Kenya and southern Ethiopia may be able to diversify income by selling milk to urban residents. However, milk sold in open-air markets is often low in quality because it has been transported long distances without refrigeration and is subject to spoilage, or because milk is adulterated prior to sale to boost volume or enhance appearance. Open-air markets are characterized by low-income consumers who must make choices about milk quality with virtually no information other than their own sensory perceptions. PARIMA researchers used an experimental-auction approach to determine what residents in Moyale, Kenya, are willing to pay (WTP) …

Growing Fields Of Interest: Using An Expand And Reduce Strategy For Domain Model Extraction, Christopher Thomas, Pankaj Mehra, Roger Brooks, Amit P. Sheth

Kno.e.sis Publications

Domain hierarchies are widely used as models underlying information retrieval tasks. Formal ontologies and taxonomies enrich such hierarchies further with properties and relationships associated with concepts and categories but require manual effort; therefore they are costly to maintain, and often stale. Folksonomies and vocabularies lack rich category structure and are almost entirely devoid of properties and relationships. Classification and extraction require the coverage of vocabularies and the alterability of folksonomies and can largely benefit from category relationships and other properties. With Doozer, a program for building conceptual models of information domains, we want to bridge the gap between the vocabularies …

Successful Implementation Of Collective Action And Human-Capacity Building Among Pastoralists In Southern Ethiopia: Lessons Learned, 2001-2008, D. Layne Coppock, Seyoum Tezera, Solomon Desta, Getachew Gebru

Environment and Society Faculty Publications

Since 2000 the PARIMA project has implemented pilot risk-management activities among poverty-stricken, semi-settled pastoralists in southern Ethiopia. The goal has been to improve human welfare via collective action and capacity building. Outcomes include progress in income generation, asset conservation, and livelihood diversification. The approach has been unique to southern Ethiopia in that a bottom-up, participatory perspective has dominated. It has focused on the priorities and felt needs of local people rather than top-down development of livestock or agricultural technology. Fifty-nine collective-action groups were created. Dominated by women, they have included over 2,300 members and most groups have been recently merged …

Are Cattle Die-Offs Predictable On The Borana Plateau, D. Layne Coppock, Getachew Gebru, Solomon Desta, Sintayehu Mesele, Seyoum Tezerra

Environment and Society Faculty Publications

Drought regularly affects rangelands and contributes to high death rates for livestock and poverty for pastoralists. But do livestock losses occur randomly simply when rainfall is low, or are they cyclical and predictable? Previously, PARIMA researchers proposed that high stocking rates—combined with low rainfall—trigger livestock die-offs on the Borana Plateau. It takes about six years for animal numbers to recover, setting the stage for another die-off when a dry year occurs. This “boom-and-bust” cycle is based on observed herd crashes in 1983-5, 1991-3, and 1998-9. Researchers predicted in 2002 that the next major die-off would occur during 2004-06, and one …

Nutrient Loading And Eutrophication In The Great Salt Lake, Wayne A. Wurtsbaugh

Watershed Sciences Faculty Publications

No abstract provided.

Evaluation Of Striped Bass Stocks In Virginia, Monitoring And Tagging Studies, 2004-2008 Annual Report, 1 September 2007 - 31 September 2008, Philip W. Sadler, John M. Hoenig, Robert E. Harris, Matthew W. Smith, Rebecca J. Wilk, Lydia M. Goins

Reports

This report presents the results of striped bass (Morone saxatilis) tagging and monitoring activities in Virginia during the period 1 September 2007 through 31 August 2008. It includes an assessment of the biological characteristics of striped bass taken from the 2008 spring spawning run, estimates of annual survival and fishing mortality based on annual spring tagging, and the results of the study that documents the prevalence of mycobacterial infections of striped bass in Chesapeake Bay. The information contained in this report is required by the Atlantic States Marine Fisheries Commission and is used to implement a coordinated management plan for …

Cariporide Prodrugs: Targeting Brain Cancer Cells Through Sodium-Proton Exchange Inhibition, Jacob Vervynckt, Johnathan Brantley, Jessica Moore, Mark Graves Ii, William Harley, Fredric A. Gorin, Hasan Palandoken

Chemistry and Biochemistry

More than 200,000 people in the United States are diagnosed with a primary or metastatic brain tumor annually. The life expectancy for these individuals is approximately 9-12 months from the time of diagnosis. This poor prognosis is due to the ineffectiveness of existing therapies (i.e., chemotherapy and radiotherapy) against brain cancer, where the primary problem is the inability to differentiate cancer cells from healthy brain cells.

Relative to healthy brain tissue, the heightened metabolism of cancer cells increases their reliance on the ion transport proteins NHE (sodium-proton exchanger) and NCX (sodium-calcium exchanger). Inhibition of these proteins disrupts the intricate pH …

Alkoxyamine Polymers: Versatile Materials For Surface Ligation Applications, Lindsey Hines, Jessica Moore, David Dahl, Belinda Lady, Johnathan Brantley, Hasan Palandoken

Chemistry and Biochemistry

Immobilization of biomolecules (i.e., proteins, carbohydrates), on polymeric surfaces has been an area of intense research. The resultant bioconjugates often display increased stability, bioavailability and activity. Our research program seeks to explore the utility of the alkoxyamine (RONH2) functional group in new materials as versatile ligating sites for the immobilization of various compounds.

The ease with which alkoxyamines (RONH2) condense with aldehydes or ketones has prompted their widespread use in labelling liposome, bacterial and mammalian cell surfaces as well as chemoselectively ligating small molecule ‘recognition elements' onto polyfunctional substrates. These condensation reactions proceed in aqueous media to afford the robust …

Removal Of Benzaldehyde From Methanol Using Alkoxyamine Functionalized Silica Gel, Dino Sulejmanovic, Carrie Jo Pruitt, Eric Conte, Hasan Palandoken, Shing-Yi Suen

Chemistry and Biochemistry

Alkoxyamines (RONH₂) react readily with aldehydes and ketones to form stable oxime ethers, and, thus are expected to be excellent scavengers of these compounds. We installed alkoxyamines on silica gel surface to remove benzaldehyde from methanol. Silica gel was immersed in H₂O₂/H₂SO₄ solution to activate the surface. Activated silica gel was then reacted with 3-chloropropyltrichlorosilane. Displacement of the chloride with N-hydroxyphthalimide and subsequent treatment with hydrazine provided alkoxyamines on the surface of silica gel. The resulting silica gel surface with alkoxyamine functional groups was immersed in a 100 ppm benzaldehyde solution …

The Effects Of A Networked Data Acquisition System On Student Learning In General Chemistry Laboratories, Stuart C. Burris, Les L. Pesterfield, Darwin Dahl, Hasan Palandoken, Jacqueline Pope-Tarrence

Chemistry and Biochemistry

We have recently incorporated a networked data acquisition and analysis system into in our second semester general chemistry laboratories. Our investigation team has conducted a study to evaluate the effects of the networked data acquisition system on student performance on a Beer's Law laboratory. We focused on two specific phenomena: the effect of the networked data acquisition system on 1) student learning of specific content material and 2) student comfort level with laboratory work and data analysis. The study involved a networked data acquisition group (employing a UV-Vis spectrometer and colorimeters) and a control group (employing traditional, single wavelength spectrometers). …

Transcriptome Analysis Identifies Novel Responses And Potential Regulatory Genes Involved In Seasonal Dormancy Transitions Of Leafy Spurge (Euphorbia Esula L.), David P. Horvath, Wun S. Chao, Jeffrey C. Suttle, Jyothi Thimmapuram, James V. Anderson

Cyber Center Publications

Dormancy of buds is a critical developmental process that allows perennial plants to survive extreme seasonal variations in climate. Dormancy transitions in underground crown buds of the model herbaceous perennial weed leafy spurge were investigated using a 23 K element cDNA microarray. These data represent the first large-scale transcriptome analysis of dormancy in underground buds of an herbaceous perennial species. Crown buds collected monthly from August through December, over a five year period, were used to monitor the changes in the transcriptome during dormancy transitions.

The Strength Of Statistical Evidence For Composite Hypotheses With An Application To Multiple Comparisons, David R. Bickel

COBRA Preprint Series

The strength of the statistical evidence in a sample of data that favors one composite hypothesis over another may be quantified by the likelihood ratio using the parameter value consistent with each hypothesis that maximizes the likelihood function. Unlike the p-value and the Bayes factor, this measure of evidence is coherent in the sense that it cannot support a hypothesis over any hypothesis that it entails. Further, when comparing the hypothesis that the parameter lies outside a non-trivial interval to the hypotheses that it lies within the interval, the proposed measure of evidence almost always asymptotically favors the correct hypothesis …

Managing Gambel Oak In Southwestern Ponderosa Pine Forests: The Status Of Our Knowledge, Scott R. Abella

Public Policy and Leadership Faculty Publications

Gambel oak (Quercus gambelii) is a key deciduous species in southwestern ponderosa pine (Pinus ponderosa) forests and is important for wildlife habitat, soil processes, and human values. This report (1) summarizes Gambel oak’s biological characteristics and importance in ponderosa pine forests, (2) synthesizes literature on changes in tree densities and fire frequencies since Euro-American settlement in pine-oak forests, (3) suggests management prescriptions for accomplishing various oak management objectives (for example, increasing diameter growth or acorn production), and (4) provides an appendix containing 203 Gambel oak literature citations organized by subject. Nine studies that reconstructed Gambel oak density changes since settlement …