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- School of Earth, Environmental, and Marine Sciences Faculty Publications and Presentations (244)
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Articles 1 - 30 of 269
Full-Text Articles in Physical Sciences and Mathematics
The Impact Of Pricing Structure Change On Residential Water Consumption: A Long-Term Analysis Of Water Utilities In California, Juhee Lee, Mehdi Nemati, Maura Allaire, Ariel Dinar
The Impact Of Pricing Structure Change On Residential Water Consumption: A Long-Term Analysis Of Water Utilities In California, Juhee Lee, Mehdi Nemati, Maura Allaire, Ariel Dinar
School of Earth, Environmental, and Marine Sciences Faculty Publications and Presentations
California's demand-side urban water management policies, such as shifting water pricing structures from non-conservation to conservation-based rates, have received much attention in terms of meeting the state's short- and long-term water conservation policies. This paper quantifies the effect of pricing structure changes on residential water consumption using a survey dataset of 189 major California water utilities from 1994 to 2019. Results of our study demonstrate that residential per capita per day water consumption was reduced by an average of 2.6% when water agencies switched from non-conservation-based to conservation-based pricing structures. We also found evidence that the longer a utility maintained …
Detection And Monitoring Of Plant Pathogens And Pests, Walter F. Mahaffee, Lindsey D. Thiessen, Kevin M. King, Robin A. Choudhury
Detection And Monitoring Of Plant Pathogens And Pests, Walter F. Mahaffee, Lindsey D. Thiessen, Kevin M. King, Robin A. Choudhury
School of Earth, Environmental, and Marine Sciences Faculty Publications and Presentations
No abstract provided.
Salmonella In The Environment: A Review On Ecology, Antimicrobial Resistance, Seafood Contaminations, And Human Health Implications, Mohammad Maruf Billah, Md Saydur Rahman
Salmonella In The Environment: A Review On Ecology, Antimicrobial Resistance, Seafood Contaminations, And Human Health Implications, Mohammad Maruf Billah, Md Saydur Rahman
School of Earth, Environmental, and Marine Sciences Faculty Publications and Presentations
Salmonella is a genus of Gram-negative bacteria that is responsible for numerous food poisoning outbreaks worldwide. With 93.8 million food-borne illnesses and 155,000 fatalities annually, it has emerged as a significant global public health issue. There are currently more than 2,500 distinct Salmonella serotypes, and more than half of them are associated with Salmonella enterica. An increasing global public health concern for humans and animals is antimicrobial resistance by Salmonella species worldwide. Salmonella infections can be lethal; conditioned with an increased prevalence of multi-drug resistant (MDR) strains in the future. The emergence of MDR Salmonella serotypes is considerably …
Managing Inter-Organizational Trust And Risk Perceptions In Transboundary Fisheries Governance Networks, Evelyn Roozee, Dongkyu Kim, Antonia Sohns, Jasper R. De Vries, Owen Temby, Gordon M. Hickey
Managing Inter-Organizational Trust And Risk Perceptions In Transboundary Fisheries Governance Networks, Evelyn Roozee, Dongkyu Kim, Antonia Sohns, Jasper R. De Vries, Owen Temby, Gordon M. Hickey
School of Earth, Environmental, and Marine Sciences Faculty Publications and Presentations
Transboundary fishery management represents a significant governance challenge that requires ongoing inter-organizational communication, collaboration, and collective action to ensure sustainability. Previous research suggests that different dimensions of perceived risk, trust, and control interact in complex ways to affect inter-organizational collaborative performance, providing an administrative ‘architecture’ that enables partners to share resources, engage in teamwork, resolve conflict, and coordinate tasks and responsibilities while also allaying their concerns about the alliance. However, the extent to which different control mechanisms influence trust and mitigate the perceived risks of collaboration between the diverse organizations involved in transboundary fisheries management remains unclear. This paper presents …
Disaster Plant Pathology: Smart Solutions For Threats To Global Plant Health From Natural And Human-Driven Disasters, Berea A. Etherton, Robin A. Choudhury, Ricardo I. Alcalá Briseño, Romaric A. Mouafo-Tchinda, Aaron I. Plex Sulá, Manoj Choudhury, Ashish Adhikari, Si Lin Lei, Nattapol Kraisitudomsook, Jacobo Robledo Buritica
Disaster Plant Pathology: Smart Solutions For Threats To Global Plant Health From Natural And Human-Driven Disasters, Berea A. Etherton, Robin A. Choudhury, Ricardo I. Alcalá Briseño, Romaric A. Mouafo-Tchinda, Aaron I. Plex Sulá, Manoj Choudhury, Ashish Adhikari, Si Lin Lei, Nattapol Kraisitudomsook, Jacobo Robledo Buritica
School of Earth, Environmental, and Marine Sciences Faculty Publications and Presentations
Disaster plant pathology addresses how natural and human-driven disasters impact plant diseases, and the requirements for smart management solutions. Local to global drivers of plant disease change in response to disasters, often creating environments more conducive to plant disease. Most disasters have indirect effects on plant health through factors such as disrupted supply chains and damaged infrastructure. There is also the potential for direct effects from disasters, such as pathogen or vector dispersal due to floods, hurricanes, and human migration driven by war. Pulse stressors such as hurricanes and war require rapid responses, while press stressors such as climate change …
Activity Patterns Of The Endangered Amargosa Vole (Microtus Californicus Scripensis), Austin N. Roy, Anna D. Rivera Roy, Deana L. Clifford, Janet E. Foley
Activity Patterns Of The Endangered Amargosa Vole (Microtus Californicus Scripensis), Austin N. Roy, Anna D. Rivera Roy, Deana L. Clifford, Janet E. Foley
School of Earth, Environmental, and Marine Sciences Faculty Publications and Presentations
Examining the activity patterns of wildlife is an important aspect of understanding the ecology of a species and may be especially important for species of conservation concern. We used remotely triggered cameras to describe the daily and seasonal activity patterns and examine ecological factors that influence the activity of the Amargosa Vole (Microtus californicus scirpensis), a California endemic listed federally and by the state as Endangered, and is a marsh habitatspecialist in the Mojave Desert. We found that vole activity was greatest during crepuscular periods, followed by nocturnal and diurnal periods. We saw strong seasonal effects, with the highest activity …
Effects Of Elevated Temperature On 8-Ohdg Expression In The American Oyster (Crassostrea Virginica): Induction Of Oxidative Stress Biomarkers, Cellular Apoptosis, Dna Damage And Γh2ax Signaling Pathways, Md Faizur Rahman, Mohammad Maruf Billah, Richard J. Kline, Md Saydur Rahman
Effects Of Elevated Temperature On 8-Ohdg Expression In The American Oyster (Crassostrea Virginica): Induction Of Oxidative Stress Biomarkers, Cellular Apoptosis, Dna Damage And Γh2ax Signaling Pathways, Md Faizur Rahman, Mohammad Maruf Billah, Richard J. Kline, Md Saydur Rahman
School of Earth, Environmental, and Marine Sciences Faculty Publications and Presentations
Global temperature is increasing due to anthropogenic activities and the effects of elevated temperature on DNA lesions are not well documented in marine organisms. The American oyster (Crassostrea virginica, an edible and commercially important marine mollusk) is an ideal shellfish species to study oxidative DNA lesions during heat stress. In this study, we examined the effects of elevated temperatures (24, 28, and 32 °C for one-week exposure) on heat shock protein-70 (HSP70, a biomarker of heat stress), 8-hydroxy-2’-deoxyguanosine (8-OHdG, a biomarker of pro-mutagenic DNA lesion), double-stranded DNA (dsDNA), γ-histone family member X (γH2AX, a molecular biomarker of DNA damage), …
Effect Of Different Pre-Growth Temperatures On The Survival Kinetics Of Salmonella Enterica And Listeria Monocytogenes In Fresh-Cut Salad During Refrigerated Storage, Avninder Kaur, Veerachandra K. Yemmireddy
Effect Of Different Pre-Growth Temperatures On The Survival Kinetics Of Salmonella Enterica And Listeria Monocytogenes In Fresh-Cut Salad During Refrigerated Storage, Avninder Kaur, Veerachandra K. Yemmireddy
School of Earth, Environmental, and Marine Sciences Faculty Publications and Presentations
The effect of the pre-growth temperature of bacterial cultures on their subsequent survival kinetics in fresh-cut produce during refrigerated storage was investigated in this study. Three-strain cocktails of Listeria monocytogenes and Salmonella enterica, cultured at different growth temperatures (4, 21, and 37 °C) were inoculated on fresh-cut mixed salad and on individual produce in the mixed salad. The inoculated samples were stored at 4 °C and 80 ± 2% relative humidity (RH) for up to 72 h and the growth, survival, or death kinetics were determined at regular intervals. The results indicate that depending upon the type of pathogen …
Experimental Studies On The Operation Of Agricultural Crops Mowing Unit With Simultaneous Chopping And Incorporation Of Stubble Into The Soil, Volodymyr Nadykto, Sergey Kiurchev, Tatiana Chorna, Taras Hutsol, Szymon Głowacki, Anatoliy Rud, Alona Shevtsova, Igor Ryabov, Katarzyna Szwedziak
Experimental Studies On The Operation Of Agricultural Crops Mowing Unit With Simultaneous Chopping And Incorporation Of Stubble Into The Soil, Volodymyr Nadykto, Sergey Kiurchev, Tatiana Chorna, Taras Hutsol, Szymon Głowacki, Anatoliy Rud, Alona Shevtsova, Igor Ryabov, Katarzyna Szwedziak
Sociology Faculty Publications and Presentations
For harvesting crops, one-phase and two-phase methods are most often used. When implementing the second one, mounted and trailed units are used. The latter is becoming less and less used due to the problems with movement stability in the horizontal plane because of the asymmetric layout. A stubble background, which is susceptible to solar and wind influences, is formed as a consequence of application of the mounted harvesting unit, As a result, the field’s soil in the inter-swath space intensively loses moisture. A harvesting unit based on a tractor with rear steerable wheels has been designed to eliminate this shortcoming. …
Nutritional Challenges Of Substituting Farmed Animals For Wild Fish In Human Diets, Sebastian A. Heilpern, Rafael M. Almeida, Kathryn J. Fiorella, Alexander S. Flecker, Demetra Williams, Peter B. Mcintyre
Nutritional Challenges Of Substituting Farmed Animals For Wild Fish In Human Diets, Sebastian A. Heilpern, Rafael M. Almeida, Kathryn J. Fiorella, Alexander S. Flecker, Demetra Williams, Peter B. Mcintyre
School of Earth, Environmental, and Marine Sciences Faculty Publications and Presentations
Wild fisheries provide billions of people with a key source of multiple essential nutrients. As fisheries plateau or decline, nourishing more people will partially rely on shifting consumption to farmed animals. The environmental implications of transitions among animal-sourced foods have been scrutinized, but their nutritional substitutability remains unclear. We compared concentrations of six essential dietary nutrients across >5000 species of wild fishes, aquaculture, poultry and livestock species, representing >65% of animals consumed globally. Wild fishes are both more nutrient-dense and variable than farmed animals; achieving recommended intake of all nutrients with farmed species could require consuming almost four times more …
Widespread Dominance Of Methane Ebullition Over Diffusion In Freshwater Aquaculture Ponds, Renske J. E. Vroom, Sarian Kosten, Rafael M. Almeida, Raquel Mendonça, Ive S. Muzitano, Icaro Barbosa, Jonas Nasário, Ernandes S. Oliveira Junior, Alexander S. Flecker, Nathan Barros
Widespread Dominance Of Methane Ebullition Over Diffusion In Freshwater Aquaculture Ponds, Renske J. E. Vroom, Sarian Kosten, Rafael M. Almeida, Raquel Mendonça, Ive S. Muzitano, Icaro Barbosa, Jonas Nasário, Ernandes S. Oliveira Junior, Alexander S. Flecker, Nathan Barros
School of Earth, Environmental, and Marine Sciences Faculty Publications and Presentations
An ever-increasing demand for protein-rich food sources combined with dwindling wild fish stocks has caused the aquaculture sector to boom in the last two decades. Although fishponds are potentially strong emitters of the greenhouse gas methane (CH4), little is known about the magnitude, pathways, and drivers of these emissions. We measured diffusive CH4 emissions at the margin and in the center of 52 freshwater fishponds in Brazil. In a subset of ponds (n = 31) we additionally quantified ebullitive CH4 fluxes and sampled water and sediment for biogeochemical analyses. Sediments (n = 20) were …
The Accumulation And Growth Of Pseudomonas Aeruginosa On Surfaces Is Modulated By Surface Mechanics Via Cyclic-Di-Gmp Signaling, Liyun Wang, Yu-Chern Wong, Joshua M. Correira, Megan Wancura, Chris J. Geiger, Shanice S. Webster, Ahmed Touhami, Benjamin J. Butler, George A. O’Toole, Richard M. Langford
The Accumulation And Growth Of Pseudomonas Aeruginosa On Surfaces Is Modulated By Surface Mechanics Via Cyclic-Di-Gmp Signaling, Liyun Wang, Yu-Chern Wong, Joshua M. Correira, Megan Wancura, Chris J. Geiger, Shanice S. Webster, Ahmed Touhami, Benjamin J. Butler, George A. O’Toole, Richard M. Langford
Physics and Astronomy Faculty Publications and Presentations
Attachment of bacteria onto a surface, consequent signaling, and accumulation and growth of the surface-bound bacterial population are key initial steps in the formation of pathogenic biofilms. While recent reports have hinted that surface mechanics may affect the accumulation of bacteria on that surface, the processes that underlie bacterial perception of surface mechanics and modulation of accumulation in response to surface mechanics remain largely unknown. We use thin and thick hydrogels coated on glass to create composite materials with different mechanics (higher elasticity for thin composites; lower elasticity for thick composites) but with the same surface adhesivity and chemistry. The …
Self-Organization For Community Resilience In An Invisible Agricultural Community, Anna Erwin, Chelsea A. Silva, Zhao Ma
Self-Organization For Community Resilience In An Invisible Agricultural Community, Anna Erwin, Chelsea A. Silva, Zhao Ma
School of Earth, Environmental, and Marine Sciences Faculty Publications and Presentations
This study investigates how self-organizing efforts by residents of informal settlements, primarily migrant and informal farmworkers, shape community resilience in Majes, a water-scarce irrigation district in the Atacama Desert of Peru. We collected 45 semi-structured interviews with residents and authorities in Majes and analyzed findings through a framework of self-organizing. Analyses revealed that self-organizing by residents of informal settlements incorporated the three components of White’s theory of Community Agency and Community Resilience, which contends that marginalized communities increase resilience by fostering a commons praxis, practicing a prefigurative politics, and developing opportunities for economic autonomy. We also found …
Draft Genome Of Methanol-Oxidizing Methylobacterium Fujisawaense Strain Lac1, Jooho Chung, Jinha Kim, John C. Blazier, Myung Hwangbo, Kung-Hui Chu
Draft Genome Of Methanol-Oxidizing Methylobacterium Fujisawaense Strain Lac1, Jooho Chung, Jinha Kim, John C. Blazier, Myung Hwangbo, Kung-Hui Chu
School of Earth, Environmental, and Marine Sciences Faculty Publications and Presentations
We report the draft genome of Methylobacterium fujisawaense LAC1 isolated from an acidic aquifer in Indian Head, MD, USA. The genome contains 5,883,000 bp and has a GC content of 70% with 5,434 protein-encoding genes with functional assignments. This strain can grow on methanol with lanthanum, a rare earth element.
Advances And Perspectives Of Using Stable Isotope Probing (Sip)-Based Technologies In Contaminant Biodegradation, Jinha Kim, Myung Hwangbo, Chih-Hsuan Shih, Kung-Hui Chu
Advances And Perspectives Of Using Stable Isotope Probing (Sip)-Based Technologies In Contaminant Biodegradation, Jinha Kim, Myung Hwangbo, Chih-Hsuan Shih, Kung-Hui Chu
School of Earth, Environmental, and Marine Sciences Faculty Publications and Presentations
Stable isotope probing (SIP) is a powerful tool to study microbial community structure and function in both nature and engineered environments. Coupling with advanced genomics and other techniques, SIP studies have generated substantial information to allow researchers to draw a clearer picture of what is occurring in complex microbial ecosystems. This review provides an overview of the advances of SIP-based technologies over time, summarizes the status of SIP applications to contaminant biodegradation, provides critical perspectives on ecological interactions within the community, and important factors (controllable and non-controllable) to be considered in SIP experimental designs and data interpretation. Current trend and …
Advances And Perspectives Of Using Stable Isotope Probing (Sip)-Based Technologies In Contaminant Biodegradation, Jinha Kim, Myung Hwangbo, Chih-Hsuan Shih, Kung-Hui Chu
Advances And Perspectives Of Using Stable Isotope Probing (Sip)-Based Technologies In Contaminant Biodegradation, Jinha Kim, Myung Hwangbo, Chih-Hsuan Shih, Kung-Hui Chu
School of Earth, Environmental, and Marine Sciences Faculty Publications and Presentations
Highlights
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Advances of SIP-based techniques/applications are comprehensively reviewed.
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Varying stable isotopes types/numbers/ positions reinforce biodegradation studies.
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SIP identifies microbes capable of co-metabolic degradation of contaminants.
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Single-cell SIP.and qSIP are promising to overcome cross-feeding effects.
Abstract
Stable isotope probing (SIP) is a powerful tool to study microbial community structure and function in both nature and engineered environments. Coupling with advanced genomics and other techniques, SIP studies have generated substantial information to allow researchers to draw a clearer picture of what is occurring in complex microbial ecosystems. This review provides an overview of the advances of SIP-based technologies over time, summarizes the …
Chloeia Rozbaczyloi, A New Species Of Polychaete (Archinominae: Amphinomidae) And First Record Of The Family For The Nazca Ridge, Southeastern Pacific Ocean, Juan I. Cañete, María S. Romero, Erin E. Easton, Ariadna Mecho, Javier Sellanes
Chloeia Rozbaczyloi, A New Species Of Polychaete (Archinominae: Amphinomidae) And First Record Of The Family For The Nazca Ridge, Southeastern Pacific Ocean, Juan I. Cañete, María S. Romero, Erin E. Easton, Ariadna Mecho, Javier Sellanes
School of Earth, Environmental, and Marine Sciences Faculty Publications and Presentations
Highlights
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A new species of amphinomid polychaete, Chloeia rozbaczyloi sp. nov. is described.
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The new species inhabits poorly explored seamounts of the remote Nazca Ridge off Chile.
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This finding constitutes the first report of the genus Chloeia for Chilean waters.
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Genetic data for Chloeia rozbaczyloi sp. nov is provided.
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The new species is reported for seamounts lying within the recently created Nazca Desventuradas Marine Park.
Abstract
The amphinomid polychaete Chloeia rozbaczyloi sp. nov., collected from seamounts of the Nazca Ridge (NR), northwest of Desventuradas islands, southeastern Pacific Ocean, is described. The new species was observed on only two of seven …
Saturating Growth Rate Against Phosphorus Concentration Explained By Macromolecular Allocation, Gabrielle Armin, Jongsun Kim, Keisuke Inomura
Saturating Growth Rate Against Phosphorus Concentration Explained By Macromolecular Allocation, Gabrielle Armin, Jongsun Kim, Keisuke Inomura
School of Earth, Environmental, and Marine Sciences Faculty Publications and Presentations
The saturating relationship between phytoplankton growth rate and environmental nutrient concentration has been widely observed, yet the mechanisms behind the relationship remain elusive. Here, we use a mechanistic model of phytoplankton and show that the saturating relationship between growth rate and phosphorous concentration can be interpreted by intracellular macromolecular allocation. At low nutrient levels, the diffusive nutrient transport linearly increases with the phosphorous concentration, while the internal phosphorous requirement increases with the growth rate, leading to a non-linear increase in the growth rate with phosphorous. This increased phosphorous requirement is due to the increased allocation to biosynthetic and photosynthetic molecules. …
Integrating Remote Sensing With Ground-Based Observations To Quantify The Effects Of An Extreme Freeze Event On Black Mangroves (Avicennia Germinans) At The Landscape Scale, Melinda Martinez, Michael J. Osland, James B. Grace, Nicholas M. Enwright, Camille L. Stagg, Camille L. Stagg, Simen Kaalstad, Gordon H. Anderson, Elena A. Flores, Alejandro Fierro-Cabo
Integrating Remote Sensing With Ground-Based Observations To Quantify The Effects Of An Extreme Freeze Event On Black Mangroves (Avicennia Germinans) At The Landscape Scale, Melinda Martinez, Michael J. Osland, James B. Grace, Nicholas M. Enwright, Camille L. Stagg, Camille L. Stagg, Simen Kaalstad, Gordon H. Anderson, Elena A. Flores, Alejandro Fierro-Cabo
School of Earth, Environmental, and Marine Sciences Faculty Publications and Presentations
Climate change is altering the frequency and intensity of extreme weather events. Quantifying ecosystem responses to extreme events at the landscape scale is critical for understanding and responding to climate-driven change but is constrained by limited data availability. Here, we integrated remote sensing with ground-based observations to quantify landscape-scale vegetation damage from an extreme climatic event. We used ground- and satellite-based black mangrove (Avicennia germinans) leaf damage data from the northern Gulf of Mexico (USA and Mexico) to examine the effects of an extreme freeze in a region where black mangroves are expanding their range. The February 2021 …
Sulfur Cycling Connects Microbiomes And Biogeochemistry In Deep-Sea Hydrothermal Plumes, Zhichao Zhou, Patricia Q. Tran, Alyssa M. Adams, Kristopher Kieft, John A. Breier, Caroline S. Fortunato, Cody S. Sheik, Julie A. Huber, Meng Li, Gregory J. Dick, Karthik Anantharaman
Sulfur Cycling Connects Microbiomes And Biogeochemistry In Deep-Sea Hydrothermal Plumes, Zhichao Zhou, Patricia Q. Tran, Alyssa M. Adams, Kristopher Kieft, John A. Breier, Caroline S. Fortunato, Cody S. Sheik, Julie A. Huber, Meng Li, Gregory J. Dick, Karthik Anantharaman
School of Earth, Environmental, and Marine Sciences Faculty Publications and Presentations
In globally distributed deep-sea hydrothermal vent plumes, microbiomes are shaped by the redox energy landscapes created by reduced hydrothermal vent fluids mixing with oxidized seawater. Plumes can disperse over thousands of kilometers and their characteristics are determined by geochemical sources from vents, e.g., hydrothermal inputs, nutrients, and trace metals. However, the impacts of plume biogeochemistry on the oceans are poorly constrained due to a lack of integrated understanding of microbiomes, population genetics, and geochemistry. Here, we use microbial genomes to understand links between biogeography, evolution, and metabolic connectivity, and elucidate their impacts on biogeochemical cycling in the deep sea. Using …
Effects Of Short-Term Exposure To A Pesticide Mixture On Free-Swimming Behavior In Goldfish, Carassius Auratus, Esmirna Cantu, Michelle Rivera, Brittney Lacy, Md Saydur Rahman
Effects Of Short-Term Exposure To A Pesticide Mixture On Free-Swimming Behavior In Goldfish, Carassius Auratus, Esmirna Cantu, Michelle Rivera, Brittney Lacy, Md Saydur Rahman
School of Earth, Environmental, and Marine Sciences Faculty Publications and Presentations
Highlights
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We observed effects of pesticides exposure on free-swimming behaviors in goldfish.
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Pesticides profoundly impacting natural swimming patterns.
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Behavioral analysis showed a dose- and time-dependent, decrease in distance swam.
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Vertical/horizontal spatial behavioral use both affected under exposure conditions.
Abstract
The prevalence of pesticides in the aquatic environment continues to increase due to anthropogenic activities and poses a threat to aquatic organisms. Notably, the intensive use of pesticides can cause detrimental effects (i.e., chemical stressors) on animal behavior. The aim of this study was to determine the short-term exposure effects (5-day) of an environmentally relevant pesticide mixture (low- and high-dose: metolachlor …
Visualization Of Productivity Zones Based On Nitrogen Mass Balance Model In Narragansett Bay, Rhode Island, Jongsun Kim, Myung Hwangbo, Patricia S. Thibodeau, Georgia Rhodes, Emma Hogarth, Stewart Copeland
Visualization Of Productivity Zones Based On Nitrogen Mass Balance Model In Narragansett Bay, Rhode Island, Jongsun Kim, Myung Hwangbo, Patricia S. Thibodeau, Georgia Rhodes, Emma Hogarth, Stewart Copeland
School of Earth, Environmental, and Marine Sciences Faculty Publications and Presentations
Primary productivity in the coastal regions, linked to eutrophication and hypoxia, provides a critical understanding of ecosystem function. Although primary productivity largely depends on riverine nutrient inputs, estimation of the extent of riverine nutrient influences in the coastal regions is challenging. A nitrogen mass balance model is a practical tool to evaluate coastal ocean productivity to understand biological mechanisms beyond data observations. This study visualizes the biological production zones in Narragansett Bay, Rhode Island, USA, where hypoxia frequently occurs, by applying a nitrogen mass balance model. The Bay is divided into three zones - brown, green, and blue zones - …
Applications Of Environmental Dna (Edna) To Detect Subterranean And Aquatic Invasive Species: A Critical Review On The Challenges And Limitations Of Edna Metabarcoding, Sakib Tahmid Rishan, Richard J. Kline, Md Saydur Rahman
Applications Of Environmental Dna (Edna) To Detect Subterranean And Aquatic Invasive Species: A Critical Review On The Challenges And Limitations Of Edna Metabarcoding, Sakib Tahmid Rishan, Richard J. Kline, Md Saydur Rahman
School of Earth, Environmental, and Marine Sciences Faculty Publications and Presentations
The world is struggling to solve a devastating biodiversity loss that not only affects the extinction of treasured species and irreplaceable genetic variation, but also jeopardizes the food production, health, and safety of people. All initiatives aimed to conserve biodiversity rely heavily on the monitoring of both species and populations to get accurate spatial patterns and overall population assessments. Conventional monitoring techniques, such as visual surveys and counting individuals, are problematic due to challenges in identifying cryptic species or immature life stages. Environmental DNA (eDNA) is a relatively new technology that has the potential to be a faster, non-invasive, and …
Rapidly Changing Range Limits In A Warming World: Critical Data Limitations And Knowledge Gaps For Advancing Understanding Of Mangrove Range Dynamics In The Southeastern Usa, Rémi Bardou, Michael J. Osland, Steven Scyphers, Christine Shepard, Karen E. Aerni, Jahson B. Alemu I, Robert Crimian, Richard H. Day, Nicholas M. Enwright, Christopher A. Gabler
Rapidly Changing Range Limits In A Warming World: Critical Data Limitations And Knowledge Gaps For Advancing Understanding Of Mangrove Range Dynamics In The Southeastern Usa, Rémi Bardou, Michael J. Osland, Steven Scyphers, Christine Shepard, Karen E. Aerni, Jahson B. Alemu I, Robert Crimian, Richard H. Day, Nicholas M. Enwright, Christopher A. Gabler
School of Earth, Environmental, and Marine Sciences Faculty Publications and Presentations
Climate change is altering species’ range limits and transforming ecosystems. For example, warming temperatures are leading to the range expansion of tropical, cold-sensitive species at the expense of their cold-tolerant counterparts. In some temperate and subtropical coastal wetlands, warming winters are enabling mangrove forest encroachment into salt marsh, which is a major regime shift that has significant ecological and societal ramifications. Here, we synthesized existing data and expert knowledge to assess the distribution of mangroves near rapidly changing range limits in the southeastern USA. We used expert elicitation to identify data limitations and highlight knowledge gaps for advancing understanding of …
Predictive Ecology And Management Of Phyllosphere Microbial Communities Through Cross-Scale Synthesis, David W. Armitage, Morgan E. Carter, Robin A. Choudhury, Mitja Remus-Emsermann, Cindy E. Morris, Johan H. Leveau, Linda L. Kinkel, José Pablo Dundore-Arias
Predictive Ecology And Management Of Phyllosphere Microbial Communities Through Cross-Scale Synthesis, David W. Armitage, Morgan E. Carter, Robin A. Choudhury, Mitja Remus-Emsermann, Cindy E. Morris, Johan H. Leveau, Linda L. Kinkel, José Pablo Dundore-Arias
School of Earth, Environmental, and Marine Sciences Faculty Publications and Presentations
Here we summarize the main takeaways from a symposium and hybrid virtual and in-person participatory discussion focused on the challenges of scale in understanding the ecology and management of phyllosphere microbial communities. We provide an overview of the confounding effects of spatial scale on inference in microbial ecology, the spatial organization of microbial interactions in the phyllosphere, advances and remaining gaps in measuring phyllosphere colonization across scales, and the epidemiology in the phyllosphere. We hope to motivate further discussion and the development and adoption of creative approaches to solving the challenges of scale to enhance fundamental understanding and practical management …
Detection Of A Diverse Endophyte Assemblage Within Fungal Communities Associated With The Arundo Leaf Miner, Lasioptera Donacis (Diptera: Cecidomyiidae), Marie-Claude Bon, John A. Goolsby, Guy Mercadier, Fatiha Guermache, Javid Kashef, Massimo Cristofaro, Ann T. Vacek, Alan Kirk
Detection Of A Diverse Endophyte Assemblage Within Fungal Communities Associated With The Arundo Leaf Miner, Lasioptera Donacis (Diptera: Cecidomyiidae), Marie-Claude Bon, John A. Goolsby, Guy Mercadier, Fatiha Guermache, Javid Kashef, Massimo Cristofaro, Ann T. Vacek, Alan Kirk
School of Earth, Environmental, and Marine Sciences Faculty Publications and Presentations
The larvae of Lasioptera donacis Coutin feed on fungal communities lining galleries within the mesophyll of leaf sheaths of Arundo donax in an aggregative manner. It has been stated that L. donacis could have established a fundamental symbiotic relationship with one fungus, although the fungal composition of these communities remains unsettled. Using a culture-dependent approach and ITS sequencing, the present work characterizes and compares the fungal communities associated with L. donacis in Eurasia with the endophytes of A. donax in Texas where L. donacis is absent. The 65 cultivable isolates obtained from L. donacis fungal communities were sorted into 15 …
Biodiversity Of Forage Fishes In The Lower Laguna Madre, Southernmost Texas, David Camarillo Jr., Elizabeth Mogus Garcia, Carlos E. Cintra-Buenrostro
Biodiversity Of Forage Fishes In The Lower Laguna Madre, Southernmost Texas, David Camarillo Jr., Elizabeth Mogus Garcia, Carlos E. Cintra-Buenrostro
School of Earth, Environmental, and Marine Sciences Faculty Publications and Presentations
Coastal estuarine ecosystems serve as nursery habitats for many commercially and recreationally important fishes. Biodiversity is a structural indicator and has been used as a metric for conservation and management. In the hypersaline Lower Laguna Madre of Texas, a variety of organisms makes their living in and around the dominant seagrass vegetation. This study provides a general assessment of forage fishes biodiversity collected seasonally with bag seines in two sites: Holly Beach (HB) and South Bay (SB) within the most southern Texas bay system as part of a broader study on fish biology. A total of 15,880 fishes representing 32 …
Air Pollution In South Texas: A Short Communication Of Health Risks And Implications, Sai Deepak Pinakana, Esmeralda Mendez, Ismaila Ibrahim, Md. Salahuddin Majumder, Amit U. Raysoni
Air Pollution In South Texas: A Short Communication Of Health Risks And Implications, Sai Deepak Pinakana, Esmeralda Mendez, Ismaila Ibrahim, Md. Salahuddin Majumder, Amit U. Raysoni
School of Earth, Environmental, and Marine Sciences Faculty Publications and Presentations
Air pollution is a major public health concern. The region of South Texas in the United States has experienced high levels of air pollution in recent years due to an increase in population, cross-border trade between the U.S.A. and Mexico, and high vehicular activity. This review assesses the relationships between human health and air pollution in South Texas. A thorough scientific search was performed using PubMed, Science Direct, and ProQuest, with most of the literature focusing on the source apportionment of particulate matter that is 2.5 microns or less in width (PM2.5), Carbon Dioxide (CO2), carbon monoxide (CO), Black Carbon …
Assessment Of Air Pollution Levels During Sugarcane Stubble Burning Event In La Feria, South Texas, Usa, Sai Deepak Pinakana, Edward Robles, Esmeralda Mendez, Amit U. Raysoni
Assessment Of Air Pollution Levels During Sugarcane Stubble Burning Event In La Feria, South Texas, Usa, Sai Deepak Pinakana, Edward Robles, Esmeralda Mendez, Amit U. Raysoni
School of Earth, Environmental, and Marine Sciences Faculty Publications and Presentations
Agricultural stubble burning is the third largest source of air pollution after vehicular and industrial emissions. Fine particulate matter (PM2.5), volatile organic compounds (VOCs), carbon monoxide (CO), nitrogen dioxide (NO2), and black carbon (BC) are some of the pollutants emitted during such burning events. The Lower Rio Grande Valley (RGV) region of South Texas is a major hub of agricultural activity, and sugarcane farming is one of them. Unfortunately, this activity results in episodic events of high air pollution in this low-resourced, Hispanic/Latino majority region of the U.S.–Mexico border. This study presents results from a sugarcane site in La Feria, …
Health And Safety Effects Of Airborne Soil Dust In The Americas And Beyond, Daniel Q. Tong, Thomas E. Gill, William A. Sprigg, Robert Scott Van Pelt, Alexander Baklanov, Bridget Marie Barker, Jesse E. Bell, Juan Castillo, Santiago Gassó, Cassandra Gaston, Amit U. Raysoni
Health And Safety Effects Of Airborne Soil Dust In The Americas And Beyond, Daniel Q. Tong, Thomas E. Gill, William A. Sprigg, Robert Scott Van Pelt, Alexander Baklanov, Bridget Marie Barker, Jesse E. Bell, Juan Castillo, Santiago Gassó, Cassandra Gaston, Amit U. Raysoni
School of Earth, Environmental, and Marine Sciences Faculty Publications and Presentations
Risks associated with dust hazards are often underappreciated, a gap between the knowledge pool and public awareness that can be costly for impacted communities. This study reviews the emission sources and chemical, physical, and biological characteristics of airborne soil particles (dust) and their effects on human and environmental health and safety in the Pan-American region. American dust originates from both local sources (western United States, northern Mexico, Peru, Bolivia, Chile, and Argentina) and long-range transport from Africa and Asia. Dust properties, as well as the trends and interactions with criteria air pollutants, are summarized. Human exposure to dust is associated …