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Full-Text Articles in Physical Sciences and Mathematics
Metagenomic Sequencing Identifies Highly Diverse Assemblages Of Dinoflagellate Cysts In Sediments From Ships' Ballast Tanks, Lixia Shang, Zhangxi Hu, Yunyan Deng, Yuyang Liu, Xinyu Zhai, Zhaoyang Chai, Xiaohan Liu, Zifeng Zhan, Fred C. Dobbs, Ying Zhong Tang
Metagenomic Sequencing Identifies Highly Diverse Assemblages Of Dinoflagellate Cysts In Sediments From Ships' Ballast Tanks, Lixia Shang, Zhangxi Hu, Yunyan Deng, Yuyang Liu, Xinyu Zhai, Zhaoyang Chai, Xiaohan Liu, Zifeng Zhan, Fred C. Dobbs, Ying Zhong Tang
OES Faculty Publications
Ships' ballast tanks have long been known as vectors for the introduction of organisms. We applied next-generation sequencing to detect dinoflagellates (mainly as cysts) in 32 ballast tank sediments collected during 2001-2003 from ships entering the Great Lakes or Chesapeake Bay and subsequently archived. Seventy-three dinoflagellates were fully identified to species level by this metagenomic approach and single-cell polymerase chain reaction (PCR)-based sequencing, including 19 toxic species, 36 harmful algal bloom (HAB) forming species, 22 previously unreported as producing cysts, and 55 reported from ballast tank sediments for the first time (including 13 freshwater species), plus 545 operational taxonomic units …
Microbial Ecology Of Ballast Water During A Transoceanic Voyage And The Effects Of Open-Ocean Exchange, Lisa A. Drake, Gregory M. Ruiz, Bella S. Galil, Timothy L. Mullady, Daniela O. Friedmann, Fred C. Dobbs
Microbial Ecology Of Ballast Water During A Transoceanic Voyage And The Effects Of Open-Ocean Exchange, Lisa A. Drake, Gregory M. Ruiz, Bella S. Galil, Timothy L. Mullady, Daniela O. Friedmann, Fred C. Dobbs
OES Faculty Publications
The only procedure used frequently to reduce the risk of invasion by ballast-mediated biota is open-ocean exchange of ballast water, a procedure in which vessels release coastal water and replace it with oceanic water. Limited information exists concerning the effects of transport upon the aquatic microbial community throughout transit and following open-ocean exchange, A transoceanic voyage aboard a commercial bulk carrier afforded us the opportunity to sample the microbial community in exchanged and unexchanged ballast-water holds during the journey from Hadera, Israel to Baltimore, USA. Five days following the exchange process, all microbial metrics tested (i.e. bacteria concentration, virus-like particle …