Physical Sciences and Mathematics Commons^™

Segmentation Of Thermographic Images Of Hands Using A Genetic Algorithm, Payel Ghosh, Judith Gold, Melanie Mitchell

Computer Science Faculty Publications and Presentations

This paper presents a new technique for segmenting thermographic images using a genetic algorithm (GA). The individuals of the GA also known as chromosomes consist of a sequence of parameters of a level set function. Each chromosome represents a unique segmenting contour. An initial population of segmenting contours is generated based on the learned variation of the level set parameters from training images. Each segmenting contour (an individual) is evaluated for its fitness based on the texture of the region it encloses. The fittest individuals are allowed to propagate to future generations of the GA run using selection, crossover and …

Prostate Segmentation On Pelvic Ct Images Using A Genetic Algorithm, Payel Ghosh, Melanie Mitchell

Computer Science Faculty Publications and Presentations

A genetic algorithm (GA) for automating the segmentation of the prostate on pelvic computed tomography (CT) images is presented here. The images consist of slices from three-dimensional CT scans. Segmentation is typically performed manually on these images for treatment planning by an expert physician, who uses the “learned” knowledge of organ shapes, textures and locations to draw a contour around the prostate. Using a GA brings the flexibility to incorporate new “learned” information into the segmentation process without modifying the fitness function that is used to train the GA. Currently the GA uses prior knowledge in the form of texture …

Life And Evolution In Computers, Melanie Mitchell

Computer Science Faculty Publications and Presentations

This paper argues for the possibility of 'artificial life' and computational evolution, first by discussing (via a highly simplified version) John von Neumann's self-reproducing automaton and then by presenting some recent work focusing on computational evolution, in which 'cellular automata', a form of parallel and decentralized computing system, are evolved via 'genetic algorithms'. It is argued that such in silico experiments can help to make sense of the question of whether we can eventually build computers that are intelligent and alive.

Investigation Of Image Feature Extraction By A Genetic Algorithm, Steven P. Brumby, James P. Theiler, Simon J. Perkins, Neal R. Harvey, John J. Szymanski, Jeffrey J. Bloch, Melanie Mitchell

Computer Science Faculty Publications and Presentations

We describe the implementation and performance of a genetic algorithm which generates image feature extraction algorithms for remote sensing applications. We describe our basis set of primitive image operators and present our chromosomal representation of a complete algorithm. Our initial application has been geospatial feature extraction using publicly available multi-spectral aerial-photography data sets. We present the preliminary results of our analysis of the efficiency of the classic genetic operations of crossover and mutation for our application, and discuss our choice of evolutionary control parameters. We exhibit some of our evolved algorithms, and discuss possible avenues for future progress.

Statistical Dynamics Of The Royal Road Genetic Algorithm, Erik Van Nimwegen, James P. Crutchfield, Melanie Mitchell

Computer Science Faculty Publications and Presentations

Metastability is a common phenomenon. Many evolutionary processes, both natural and artificial, alternate between periods of stasis and brief periods of rapid change in their behavior. In this paper an analytical model for the dynamics of a mutation-only genetic algorithm (GA) is introduced that identifies a new and general mechanism causing metastability in evolutionary dynamics. The GA’s population dynamics is described in terms of flows in the space of fitness distributions. The trajectories through fitness distribution space are derived in closed form in the limit of infinite populations. We then show how finite populations induce metastability, even in regions where …

Embedded Particle Computation In Evolved Cellular Automata, Wim Hordijk, James P. Crutchfield, Melanie Mitchell

Computer Science Faculty Publications and Presentations

In our work we are studying how genetic algorithms (GAs) can evolve cellular automata (CAs) to perform computations that require global coordination. The evolving cellular automata" framework is an idealized means for studying how evolution (natural or computational) can create systems that perform emergent computation, in which the actions of simple components with local information and communication give rise to coordinated global information processing [3].

In previous work [4, 5], we analyzed the process by which a genetic algorithm designed CAs to perform particular tasks. In this paper we focus on how these CAs implement the emergent computational strategies for …

Evolving Globally Synchronized Cellular Automata, Rajarshi Das, James P. Crutchfield, Melanie Mitchell, James M. Hanson

Computer Science Faculty Publications and Presentations

How does an evolutionary process interact with a decentralized, distributed system in order to produce globally coordinated behavior? Using a genetic algorithm (GA) to evolve cellular automata (CAs), we show that the evolution of spontaneous synchronization, one type of emergent coordination, takes advantage of the underlying medium's potential to form embedded particles. The particles, typically phase defects between synchronous regions, are designed by the evolutionary process to resolve frustrations in the global phase. We describe in detail one typical solution discovered by the GA, delineating the discovered synchronization algorithm in terms of embedded particles and their interactions. We also use …

Genetic Algorithms And Artificial Life, Melanie Mitchell, Stephanie Forrest

Computer Science Faculty Publications and Presentations

Genetic algorithms are computational models of evolution that play a central role in many artificial-life models. We review the history and current scope of research on genetic algorithms in artificial life, giving illustrative examples in which the genetic algorithm is used to study how learning and evolution interact, and to model ecosystems, immune system, cognitive systems, and social systems. We also outline a number of open questions and future directions for genetic algorithms in artificial-life research

Revisiting The Edge Of Chaos: Evolving Cellular Automata To Perform Computations, Melanie Mitchell, Peter T. Hraber, James P. Crutchfield

Computer Science Faculty Publications and Presentations

No abstract provided.