Physical Sciences and Mathematics Commons^™

Graph Kernels And Applications In Bioinformatics, Marco Alvarez Vega

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Nowadays, machine learning techniques are widely used for extracting knowledge from data in a large number of bioinformatics problems. It turns out that in many of such problems, data observations can be naturally represented by discrete structures such as graphs, networks, trees, or sequences. For example, a protein can be seen as a cloud of interconnected atoms lying on a 3-dimensional space. The focus of this dissertation is on the development and application of machine learning techniques to bioinformatics problems wherein the data can be represented by graphs. In particular, we focus our attention on proteins, which are essential elements …