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Full-Text Articles in Physical Sciences and Mathematics

History Of Computing, George K. Thiruvathukal, David B. Dennis Sep 2017

History Of Computing, George K. Thiruvathukal, David B. Dennis

George K. Thiruvathukal

The social and organizational history of humanity is intricately entangled with the history of technology in general and the technology of information in particular. Advances in this area have often been closely involved in social and political transformations. While the contemporary period is often referred to by such names as the Computing and Information Age, this is the culmination of a series of historical transformations that have been centuries in the making. This course will provide a venue for students to learn about history through the evolution of number systems and arithmetic, calculating and computing machines, and advanced communication technology …


Experiences With Scala Across The College-Level Curriculum, Konstantin Läufer, George K. Thiruvathukal, Mark C. Lewis Jul 2017

Experiences With Scala Across The College-Level Curriculum, Konstantin Läufer, George K. Thiruvathukal, Mark C. Lewis

George K. Thiruvathukal

Various hybrid-functional languages, designed to balance compile-time error detection, conciseness, and performance, have emerged. Scala, e.g., is interoperable with Java and has become an early leader in adoption, especially in the start-up and open-source spaces. As educators, we have recognized Scala’s value as a teaching language across the CS curriculum. In CS1, the read-eval-print loop and simple, uniform syntax aid programming in the small. In CS2, higher-order methods allow concise, efficient manipulation of collections. In a programming languages course, advanced constructs facilitate the separation of concerns, program representation and interpretation, and concurrent programming. In advanced applied courses, language mechanisms and …


A Distributed Graph Approach For Pre-Processing Linked Rdf Data Using Supercomputers, Michael J. Lewis, George K. Thiruvathukal, Venkatram Vishwanath, Michael J. Papka, Andrew Johnson Jul 2017

A Distributed Graph Approach For Pre-Processing Linked Rdf Data Using Supercomputers, Michael J. Lewis, George K. Thiruvathukal, Venkatram Vishwanath, Michael J. Papka, Andrew Johnson

George K. Thiruvathukal

Efficient RDF, graph based queries are becoming more pertinent based on the increased interest in data analytics and its intersection with large, unstructured but connected data. Many commercial systems have adopted distributed RDF graph systems in order to handle increasing dataset sizes and complex queries. This paper introduces a distribute graph approach to pre-processing linked data. Instead of traversing the memory graph, our system indexes pre-processed join elements that are organized in a graph structure. We analyze the Dbpedia data-set (derived from the Wikipedia corpus) and compare our access method to the graph traversal access approach which we also devise. …


Comparison Of Visual Datasets For Machine Learning, Kent Gauen, Ryan Dailey, John Laiman, Yuxiang Zi, Nirmal Asokan, Yung-Hsiang Lu, George K. Thiruvathukal, Mei-Ling Shyu, Shu-Ching Chen Jul 2017

Comparison Of Visual Datasets For Machine Learning, Kent Gauen, Ryan Dailey, John Laiman, Yuxiang Zi, Nirmal Asokan, Yung-Hsiang Lu, George K. Thiruvathukal, Mei-Ling Shyu, Shu-Ching Chen

George K. Thiruvathukal

One of the greatest technological improvements in recent years is the rapid progress using machine learning for processing visual data. Among all factors that contribute to this development, datasets with labels play crucial roles. Several datasets are widely reused for investigating and analyzing different solutions in machine learning. Many systems, such as autonomous vehicles, rely on components using machine learning for recognizing objects. This paper compares different visual datasets and frameworks for machine learning. The comparison is both qualitative and quantitative and investigates object detection labels with respect to size, location, and contextual information. This paper also presents a new …


Who Needs Tablets? We Do, George K. Thiruvathukal Jan 2017

Who Needs Tablets? We Do, George K. Thiruvathukal

George K. Thiruvathukal

What role do tablets play increasingly in our daily lives? Is it possible that they could revolutionize the future of publishing and education?


Productivity In The Cognitive Overload Era, George K. Thiruvathukal Jan 2017

Productivity In The Cognitive Overload Era, George K. Thiruvathukal

George K. Thiruvathukal

Could technologies that emphasize the concept of "we" rather than "me" help modern society overcome its information overload?


Computational Science, Demystified...The Future, Revealed...And Cise, 2013, George K. Thiruvathukal Jan 2017

Computational Science, Demystified...The Future, Revealed...And Cise, 2013, George K. Thiruvathukal

George K. Thiruvathukal

What are some of the exciting avenues that computational science is exploring, and how can we best give a voice to such emerging ideas?


Towards Sustainable Digital Humanities Software, George K. Thiruvathukal, Shilpika Shilpika, Nicholas J. Hayward, Saulo Aguiar, Konstantin Läufer Jan 2017

Towards Sustainable Digital Humanities Software, George K. Thiruvathukal, Shilpika Shilpika, Nicholas J. Hayward, Saulo Aguiar, Konstantin Läufer

George K. Thiruvathukal

Our work in software quality for digital humanities was borne of an effort to address sustainable practices in scientific software development, where the speaker (Thiruvathukal) co-authored a position paper on the case for software engineering in scientific software development as part of an all-encompassing strategy to create more sustainable scientific software (an example of a well-known scientific software package is LINPACK). In this position paper, we addressed how “progress in scientific research is dependent on the quality and accessibility of software at all levels". This progress depends on embracing the best traditional--and emergent--practices in software engineering, especially agile practices that …


Software Engineering For Science, Jeffrey C. Carver, Neil P. Chue Hong, George K. Thiruvathukal Jan 2017

Software Engineering For Science, Jeffrey C. Carver, Neil P. Chue Hong, George K. Thiruvathukal

George K. Thiruvathukal

Software Engineering for Science provides an in-depth collection of peer-reviewed chapters that describe experiences with applying software engineering practices to the development of scientific software. It provides a better understanding of how software engineering is and should be practiced, and which software engineering practices are effective for scientific software. The book starts with a detailed overview of the Scientific Software Lifecycle, and a general overview of the scientific software development process. It highlights key issues commonly arising during scientific software development, as well as solutions to these problems. The second part of the book provides examples of the use of …


Cloudy With A Chance Of Sunshine, Or The Future Of Magazine Publishing, George K. Thiruvathukal Jan 2017

Cloudy With A Chance Of Sunshine, Or The Future Of Magazine Publishing, George K. Thiruvathukal

George K. Thiruvathukal

EIC George K. Thiruvathukal describes how the cloud can revolutionize printing and how the publishing world in particular can benefit.


El Fin, George K. Thiruvathukal Jan 2017

El Fin, George K. Thiruvathukal

George K. Thiruvathukal

EIC George K. Thiruvathukal says farewell in his final "from the editors" message.


Guest Editors' Introduction: Research On Equity And Sustained Participation In Engineering, Computing, And Technology, Tiffany Barnes, Jamie Payton, George K. Thiruvathukal, Kristy Elizabeth Boyer, Jeff Forbes Jan 2017

Guest Editors' Introduction: Research On Equity And Sustained Participation In Engineering, Computing, And Technology, Tiffany Barnes, Jamie Payton, George K. Thiruvathukal, Kristy Elizabeth Boyer, Jeff Forbes

George K. Thiruvathukal

The guest editors introduce best papers on broadening participation in computing from the RESPECT'15 conference. The five articles presented here are part one of a two-part series representing research on broadening participation in computing at all levels of education: from K-12 schools through graduate school, with a focus on diversity with regard to gender, race, and ethnicity.


A Polyglot Approach To Bioinformatics Data Integration: A Phylogenetic Analysis Of Hiv-1, Steven Reisman, Thomas Hatzopoulous, Konstantin Läufer, George K. Thiruvathukal, Catherine Putonti Jan 2017

A Polyglot Approach To Bioinformatics Data Integration: A Phylogenetic Analysis Of Hiv-1, Steven Reisman, Thomas Hatzopoulous, Konstantin Läufer, George K. Thiruvathukal, Catherine Putonti

George K. Thiruvathukal

As sequencing technologies continue to drop in price and increase in throughput, new challenges emerge for the management and accessibility of genomic sequence data. We have developed a pipeline for facilitating the storage, retrieval, and subsequent analysis of molecular data, integrating both sequence and metadata. Taking a polyglot approach involving multiple languages, libraries, and persistence mechanisms, sequence data can be aggregated from publicly available and local repositories. Data are exposed in the form of a RESTful web service, formatted for easy querying, and retrieved for downstream analyses. As a proof of concept, we have developed a resource for annotated HIV-1 …


Guest Editors' Introduction: Best Of Respect, Part 2, Tiffany Barnes, Jamie Payton, George K. Thiruvathukal, Jeff Forbes, Kristy Elizabeth Boyer Jan 2017

Guest Editors' Introduction: Best Of Respect, Part 2, Tiffany Barnes, Jamie Payton, George K. Thiruvathukal, Jeff Forbes, Kristy Elizabeth Boyer

George K. Thiruvathukal

The guest editors introduce best papers on broadening participation in computing from the RESPECT'15 conference. The five articles presented here are part two of a two-part series representing research on broadening participation in computing. These articles study participation in intersectional ways, through the perceptions and experiences of African-American middle school girls, the sense of belonging in computing for LGBTQ students, the impact of a STEM scholarship and community development program for low-income and first-generation college students, a leadership development program, and how African-American women individually take leadership to enable their success in computing.


The Need For Research In Broadening Participation, Tiffany Barnes, George K. Thiruvathukal Jan 2017

The Need For Research In Broadening Participation, Tiffany Barnes, George K. Thiruvathukal

George K. Thiruvathukal

Underrepresentation in computing is a global problem, marked by a disturbing lack of access to computing resources and education among people underrepresented by race, ethnicity, gender, income, disability, and sexual-orientation status. It is urgent that we address this divide between those with and without the knowledge to create computational artifacts or even basic functional literacy. Important alliances for broadening participation (BP) are catalyzing efforts to engage more people in computing, but they are not enough. We need solid research as well.