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Physical Sciences and Mathematics Commons

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Chemistry

Michigan Tech Publications

2020

Department of Chemistry

Articles 1 - 4 of 4

Full-Text Articles in Physical Sciences and Mathematics

Insights On Dissolved Organic Matter Production Revealed By Removal Of Charge-Transfer Interactions In Senescent Leaf Leachates, Karl M. Meingast, Brice K. Grunert, Sarah A. Green, Evan S. Kane, Nastaran Khademimoshgenani Aug 2020

Insights On Dissolved Organic Matter Production Revealed By Removal Of Charge-Transfer Interactions In Senescent Leaf Leachates, Karl M. Meingast, Brice K. Grunert, Sarah A. Green, Evan S. Kane, Nastaran Khademimoshgenani

Michigan Tech Publications

Dissolved organic matter (DOM) is a critical part of the global carbon cycle. Currently, it is understood that at least a portion of the chromophoric DOM (CDOM) character can be described through an electronic interaction of charge transfer (CT) complexes. While much work has been done to understand the influence of CT on soil and aquatic reference standard DOM, little is known about the influence of CT in fresh terrestrially derived DOM. In this study, leaf litter leachates from three tree species were treated (reduced) with sodium borohydride to determine the contribution of CT on a source of fresh terrestrial …


An International Laboratory Comparison Of Dissolved Organic Matter Composition By High Resolution Mass Spectrometry: Are We Getting The Same Answer?, Jeffrey A. Hawkes, Juliana D'Andrilli, Jeffrey N. Agar, Mark P. Barrow, Stephanie M. Berg, Núria Catalán, Hongmei Chen, Rosalie K. Chu, Richard B. Cole, Thorsten Dittmar, Rémy Gavard, Gerd Gleixner, Patrick G. Hatcher, Chen He, Nancy J. Hess, Ryan H.S. Hutchins, Amna Ijaz, Hugh E. Jones, William Kew, Maryam Khaksari, Diana Catalina Palacio Lozano, Jitao Lv, Lynn Mazzoleni, Beatriz E. Noriega-Ortega, Helena Osterholz, Nikola Radoman, Shuzhen Zhang, Phoebe Zito, David C. Podgorski Jun 2020

An International Laboratory Comparison Of Dissolved Organic Matter Composition By High Resolution Mass Spectrometry: Are We Getting The Same Answer?, Jeffrey A. Hawkes, Juliana D'Andrilli, Jeffrey N. Agar, Mark P. Barrow, Stephanie M. Berg, Núria Catalán, Hongmei Chen, Rosalie K. Chu, Richard B. Cole, Thorsten Dittmar, Rémy Gavard, Gerd Gleixner, Patrick G. Hatcher, Chen He, Nancy J. Hess, Ryan H.S. Hutchins, Amna Ijaz, Hugh E. Jones, William Kew, Maryam Khaksari, Diana Catalina Palacio Lozano, Jitao Lv, Lynn Mazzoleni, Beatriz E. Noriega-Ortega, Helena Osterholz, Nikola Radoman, Shuzhen Zhang, Phoebe Zito, David C. Podgorski

Michigan Tech Publications

High-resolution mass spectrometry (HRMS) has become a vital tool for dissolved organic matter (DOM) characterization. The upward trend in HRMS analysis of DOM presents challenges in data comparison and interpretation among laboratories operating instruments with differing performance and user operating conditions. It is therefore essential that the community establishes metric ranges and compositional trends for data comparison with reference samples so that data can be robustly compared among research groups. To this end, four identically prepared DOM samples were each measured by 16 laboratories, using 17 commercially purchased instruments, using positive-ion and negative-ion mode electrospray ionization (ESI) HRMS analyses. The …


Role Of Structural Dynamics In Selectivity And Mechanism Of Non-Heme Fe(Ii) And 2-Oxoglutarate-Dependent Oxygenases Involved In Dna Repair, Sodiq Waheed, Rajeev Ramanan, Shobhit Chaturvedi, Nicolai Lehnert, Christopher J. Schofield, Christo Z. Christov, Tatyana Karabencheva-Christova May 2020

Role Of Structural Dynamics In Selectivity And Mechanism Of Non-Heme Fe(Ii) And 2-Oxoglutarate-Dependent Oxygenases Involved In Dna Repair, Sodiq Waheed, Rajeev Ramanan, Shobhit Chaturvedi, Nicolai Lehnert, Christopher J. Schofield, Christo Z. Christov, Tatyana Karabencheva-Christova

Michigan Tech Publications

AlkB and its human homologue AlkBH2 are Fe(II)- and 2-oxoglutarate (2OG)-dependent oxygenases that repair alkylated DNA bases occurring as a consequence of reactions with mutagenic agents. We used molecular dynamics (MD) and combined quantum mechanics/molecular mechanics (QM/MM) methods to investigate how structural dynamics influences the selectivity and mechanisms of the AlkB- and AlkBH2-catalyzed demethylation of 3-methylcytosine (m3C) in single (ssDNA) and double (dsDNA) stranded DNA. Dynamics studies reveal the importance of the flexibility in both the protein and DNA components in determining the preferences of AlkB for ssDNA and of AlkBH2 for dsDNA. Correlated motions, including of a …


Richardsite, Zn2cugas4, A New Gallium-Essential Member Of The Stannite Group From The Gem Mines Near Merelani, Tanzania, Luca Bindi, John A. Jaszczak May 2020

Richardsite, Zn2cugas4, A New Gallium-Essential Member Of The Stannite Group From The Gem Mines Near Merelani, Tanzania, Luca Bindi, John A. Jaszczak

Michigan Tech Publications

The new mineral richardsite occurs as overgrowths of small (50–400 μm) dark gray, disphenoidal crystals with no evident twinning, but epitaxically oriented on wurtzite–sphalerite crystals from the gem mines near Merelani, Lelatema Mountains, Simanjiro District, Manyara Region, Tanzania. Associated minerals also include graphite, diopside, and Ge,Ga-rich wurtzite. It is brittle, dark gray in color, and has a metallic luster. It appears dark bluish gray in reflected plane-polarized light, and is moderately bireflectant. It is distinctly anisotropic with violet to light-blue rotation tints with crossed polarizers. Reflectance percentages for Rmin and Rmax in air at the respective wavelengths are 23.5, 25.0 …