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Quantifying Temporal Correlations: A Test-Retest Evaluation Of Functional Connectivity In Resting-State Fmri, Mark Fiecas, Hernando Ombao, Dan Van Lunen, Richard Baumgartner, Alexandre Coimbra, Dai Feng
Quantifying Temporal Correlations: A Test-Retest Evaluation Of Functional Connectivity In Resting-State Fmri, Mark Fiecas, Hernando Ombao, Dan Van Lunen, Richard Baumgartner, Alexandre Coimbra, Dai Feng
Mark Fiecas
There have been many interpretations of functional connectivity and proposed measures of temporal correlations between BOLD signals across different brain areas. These interpretations yield from many studies on functional connectivity using resting-state fMRI data that have emerged in recent years. However, not all of these studies used the same metrics for quantifying the temporal correlations between brain regions. In this paper, we use a public-domain test–retest resting-state fMRI data set to perform a systematic investigation of the stability of the metrics that are often used in resting-state functional connectivity (FC) studies. The fMRI data set was collected across three different …
Fast Function-On-Scalar Regression With Penalized Basis Expansions, Philip T. Reiss, Lei Huang, Maarten Mennes
Fast Function-On-Scalar Regression With Penalized Basis Expansions, Philip T. Reiss, Lei Huang, Maarten Mennes
Lei Huang
Regression models for functional responses and scalar predictors are often fitted by means of basis functions, with quadratic roughness penalties applied to avoid overfitting. The fitting approach described by Ramsay and Silverman in the 1990s amounts to a penalized ordinary least squares (P-OLS) estimator of the coefficient functions. We recast this estimator as a generalized ridge regression estimator, and present a penalized generalized least squares (P-GLS) alternative. We describe algorithms by which both estimators can be implemented, with automatic selection of optimal smoothing parameters, in a more computationally efficient manner than has heretofore been available. We discuss pointwise confidence intervals …
Fast Function-On-Scalar Regression With Penalized Basis Expansions, Philip T. Reiss, Lei Huang, Maarten Mennes
Fast Function-On-Scalar Regression With Penalized Basis Expansions, Philip T. Reiss, Lei Huang, Maarten Mennes
Philip T. Reiss
Regression models for functional responses and scalar predictors are often fitted by means of basis functions, with quadratic roughness penalties applied to avoid overfitting. The fitting approach described by Ramsay and Silverman in the 1990s amounts to a penalized ordinary least squares (P-OLS) estimator of the coefficient functions. We recast this estimator as a generalized ridge regression estimator, and present a penalized generalized least squares (P-GLS) alternative. We describe algorithms by which both estimators can be implemented, with automatic selection of optimal smoothing parameters, in a more computationally efficient manner than has heretofore been available. We discuss pointwise confidence intervals …