Life Sciences Commons^™

18s-Nemabase: Curated 18s Rrna Database Of Nematode Sequences, Kaitlin Gattoni, Eli M. S. Gendron, Rebeca Sandoval- Ruiz, Abigail Borgemeier, J. Parr Mcqueen, Rachel M. Shepherd, Dieter Slos, Tom Powers, Dorota L. Porazinska

Department of Plant Pathology: Faculty Publications

Nematodes are the most abundant and diverse animals on the planet but lack representation in biodiversity research. This presents a problem for studying nematode diversity, particularly when molecular tools (i.e., barcoding and metabarcoding) rely on well-populated and curated reference databases, which are absent for nematodes. To improve molecular identification and the assessment of nematode diversity, we created and curated an 18S rRNA database specific to nematodes (18S-NemaBase) using sequences sourced from the most recent publicly available 18S rRNA SILVA v138 database. As part of the curation process, taxonomic strings were standardized to contain a fixed number of taxonomic ranks relevant …

18s-Nemabase: Curated 18s Rrna Database Of Nematode Sequences, Kaitlin Gattoni, Eli M. S. Gendron, Rebeca Sandoval- Ruiz, Abigail Borgemeier, J. Parr Mcqueen, Rachel M. Shepherd, Dieter Slos, Tom Powers, Dorota L. Porazinska

Department of Plant Pathology: Faculty Publications

Nematodes are the most abundant and diverse animals on the planet but lack representation in biodiversity research. This presents a problem for studying nematode diversity, particularly when molecular tools (i.e., barcoding and metabarcoding) rely on well-populated and curated reference databases, which are absent for nematodes. To improve molecular identification and the assessment of nematode diversity, we created and curated an 18S rRNA database specific to nematodes (18S-NemaBase) using sequences sourced from the most recent publicly available 18S rRNA SILVA v138 database. As part of the curation process, taxonomic strings were standardized to contain a fixed number of taxonomic ranks relevant …

Western Prairie Fringed Orchid Management, Ecology, And Decline At Mormon Island, Andrew J. Caven

Transactions of the Nebraska Academy of Sciences and Affiliated Societies

The western prairie fringed orchid (Platanthera praeclara Sheviak & M. L. Bowles; WPFO) was first detected in a vegetative state on Mormon Island in 1978 and identification was confirmed following a mass flowering event in 1982. From a high count of ~60 plants the WPFO slowly declined and has not been observed since 2000 despite flowering season surveys conducted in 15 of the last 20 years. We explore the natural history of the WPFO in the contexts of Mormon Island to establish potential causes for its apparent disappearance and evaluate the possibility it persists in some capacity. Our investigation …

Gaia Contributions To Agroecology By James Lovelock (1919-2022), Steve Gliessman, Charles A. Francis

Department of Agronomy and Horticulture: Faculty Publications

In writing about the history of agroecology we too often ignore the valuable contributions of British scientist James Lovelock who recently died on his 103rd birthday. A prolific inventor and influential theorist, Lovelock is best known for the Gaia hypothesis first proposed during his innovative work in the 1960s with the United States National Aeronautics and Space Administration. He suggested that ‘the biosphere has a regulatory effect on the Earth’s environment that acts to sustain life’ as written in Gaia: A New Look at Life on Earth (Lovelock 1979). Lovelock further proposed that humans have strongly impacted the planet’s capacity …

Climate Dynamics, Invader Fitness, And Ecosystem Resistance In An Invasion-Factor Framework, Stephen L. Young, David R. Clements, Antonio Ditommaso

West Central Research and Extension Center, North Platte

As researchers and land managers increasingly seek to understand plant invasions and the external (climate) and internal (plant genetics) conditions that govern the process, new insight is helping to answer the elusive question of what makes some invasions successful and others not. Plant invasion success or failure is based on a combination of evolutionary and ecological processes. Abiotic (e.g., climate) and biotic (e.g., plant competition) conditions in the environment and plant genetics (e.g., fitness) combine in either decreasing or increasing invasion, yet it has proven challenging to know exactly which of these conditions leads to success for a given species, …

Bibliographia Phytosociologica Et Floristica Mongolia: Pars Iv, Werner Hilbig

Erforschung biologischer Ressourcen der Mongolei / Exploration into the Biological Resources of Mongolia, ISSN 0440-1298

In Ergänzung zu den bisherigen drei Teilen der Bibliographie vegetationskundlicher, vegetationsökologischer, floristischer und pflanzengeographischer Arbeiten über die Mongolei wird in dieser Arbeit Teil IV der Bibliographie vorgelegt. Er umfasst im Wesentlichen den Zeitraum 2007 bis 2014. Auch Publikationen zur Vegetationsgeschichte und zum botanischen Naturschutz werden berücksichtigt.

English summary:

In addition to the hitherto existing three parts of the bibliography of geobotanical, ecological, floristic and plant-geographical papers on Mongolia the part IV of the bibliography is given. It comprises in the main point the period from 2007 until 2014. In addition, publications on vegetation history and botanical nature protection are considered.

Quantitative Relationship Of Soil Texture With The Observed Population Density Reduction Of Heterodera Glycines After Annual Corn Rotation In Nebraska, Oscar Perez-Hernandez, Loren J. Giesler

Department of Plant Pathology: Faculty Publications

Soil texture has been commonly associated with the population density of Heterodera glycines (soybean cyst nematode: SCN), but such an association has been mainly described in terms of textural classes. In this study, multivariate analysis and a generalized linear modeling approach were used to elucidate the quantitative relationship of soil texture with the observed SCN population density reduction after annual corn rotation in Nebraska. Forty-five commercial production fields were sampled in 2009, 2010, and 2011 and SCN population density (eggs/100 cm3 of soil) for each field was determined before (Pi) and after (Pf) annual corn rotation from ten 3 3 …

Reflections On Plant And Soil Nematode Ecology: Past, Present And Future, Howard Ferris, Bryan S. Griffiths, Dorota L. Porazinska, Thomas O. Powers, Koon-Hui Wang, Mario Tenuta

Department of Plant Pathology: Faculty Publications

The purpose of this review is to highlight key developments in nematode ecology from its beginnings to where it stands today as a discipline within nematology. Emerging areas of research appear to be driven by crop production constraints, environmental health concerns, and advances in technology. In contrast to past ecological studies which mainly focused on management of plant-parasitic nematodes, current studies reflect differential sensitivity of nematode faunae. These differences, identified in both aquatic and terrestrial environments include response to stressors, environmental conditions, and management practices. Methodological advances will continue to influence the role nematodes have in addressing the nature of …

Effects Of Agricultural Conservation Practices On Fish And Wildlife Volume 2, Stuart R. Gagnon, Joseph R. Makuch, Cassandra Y. Harper

United States Department of Agriculture-Agricultural Research Service / University of Nebraska-Lincoln: Faculty Publications

This bibliography, in two volumes, is part of a multi-volume set developed by the Water Quality Information Center at the National Agricultural Library in support of the United States Department of Agriculture’s Conservation Effects Assessment Project (CEAP). The bibliography is a guide to recent scientific literature covering effects of agricultural conservation practices on fish and wildlife. The citations listed here provide information on how conservation programs and practices designed to improve fish and wildlife habitat, as well as those intended for other purposes, e.g., water quality improvement, affect various aquatic and terrestrial fauna.

Effects Of Agricultural Conservation Practices On Fish And Wildlife, Stuart R. Gagnon, Joseph R. Makuch, Cassandra Y. Harper

United States Department of Agriculture-Agricultural Research Service / University of Nebraska-Lincoln: Faculty Publications

This bibliography, in two volumes, is part of a multi-volume set developed by the Water Quality Information Center at the National Agricultural Library in support of the U.S. Department of Agriculture’s Conservation Effects Assessment Project (CEAP). The bibliography is a guide to recent scientific literature covering effects of agricultural conservation practices on fish and wildlife. The citations listed here provide information on how conservation programs and practices designed to improve fish and wildlife habitat, as well as those intended for other purposes, e.g., water quality improvement, affect various aquatic and terrestrial fauna.

Western Ironweed: Research On Anatomy, Physiology, Life History And Control, M. K. Mccarty, C. J. Scifres

Historical Research Bulletins of the Nebraska Agricultural Experiment Station

Western ironweed (Vernonia baldwini Torr.) is a member of a widespread and diverse genus. The genus is characterized by perennial herbs and shrubs. Weaver and Darland listed the increase of western ironweed, at one time sparsely distributed, as an indication of degeneration of the true prairie. They described the invasion, spread, and ultimate dominance of western ironweed in many pastures after the drought years. Weaver measured ironweed roots to a depth of 11 or 12 ft., and remarked that it was one of "the most abundant and worst weeds in native pastures derived from the true prairie." Research has …