Life Sciences Commons^™

Porifera: Biology And Medicinal Properties, Emma L. Rayfield

Undergraduate Honors Theses

The focus of this thesis is the possibility of oceanic medicine through understanding the general biology of poriferans, their symbionts, medicinal properties, and how we could harvest sponges conservatively. It was necessary to understand the basic biology of poriferans regarding their structures, differences in their classes, and how they obtain nutrition, develop, and reproduce. The ecology of the poriferans was also researched including their larval and sessile stages and how their environment determines where they settle. Additionally, ecology was examined including how poriferans interact with symbionts and other organisms. This then was utilized to seek whether poriferans had useful medical …

Characterizing Habitat Suitability For Gulf Sturgeon (Acipenser Oxyrinchus Desotoi) In Southern Louisiana, Jenna N. Brogdon

LSU Master's Theses

A generalized additive modeling (GAM) framework was used to characterize fish-habitat relationships and develop habitat suitability maps to predict spatiotemporal and ontogenetic shifts in Gulf sturgeon distribution within an impacted estuary in the northern Gulf of Mexico, Lake Pontchartrain. Gulf sturgeon (n = 103) were fitted with acoustic transmitters in the Pearl River during the early summer and fall from 2013 to 2018, and an array of acoustic receivers (n = 81) was used to monitor Gulf sturgeon habitat use and movement in the estuary from 2016 to 2019. Daily presence data from the telemetry array were paired with environmental …

Crassostrea Gigas Invasion In Southern California: Macrofaunal Diversity And Local Community Impacts Of Ecosystem Engineers On Estuarine Habitats, Noah Jansen-Yee

Theses

Many marine ecosystems are facing the growing threat of biological invasions. These invasions can have a variety of different impacts on ecosystems and their inhabitants. The Pacific oyster, Crassostrea gigas, is currently in the relatively early stages of invasion in San Diego estuaries. Crassostrea gigas is a large, filter-feeding bivalve that forms dense oyster beds on hard substrate. These oysters are known to outcompete native counterparts and drastically alter habitats where they are present. Crassostrea gigas is an ecosystem engineer that, through shell creation and formation of a dense oyster matrix, impacts ecosystems in a variety of direct and indirect …

A Characterization Of The Sandy Beach Surf Zone Fish Community And Their Ecology In Northern California And The Effects Of Marine Protected Areas, Katie B. Terhaar

Cal Poly Humboldt theses and projects

Historically written off as dull and homogenous, the dynamics of the sandy beach surf zone remains under studied world-wide. Northern California has been no exception to this global standard, as the sandy beach surf zone ecosystem in this region has yet to be characterized, and the effect of Marine Protected Areas (MPAs) on the fish and macroinvertebrate community fully ascertained.

Considered data-poor by local wildlife officials, commercially, recreationally and culturally important Amphistichus rhodoterus (redtail surfperch) and common Hyperprosopon ellipticum (silver surfperch) utilize the sandy beach surf zone in Northern California. Little is known about the effect of various environmental factors, …

A Global Agenda For Advancing Freshwater Biodiversity Research, Alain Maasri, Sonja C. Jähnig, Hendrik Freitag, 93 Co-Authors

Biology Faculty Publications

Global freshwater biodiversity is declining dramatically, and meeting the challenges of this crisis requires bold goals and the mobilisation of substantial resources. While the reasons are varied, investments in both research and conservation of freshwater biodiversity lag far behind those in the terrestrial and marine realms. Inspired by a global consultation, we identify 15 pressing priority needs, grouped into five research areas, in an effort to support informed stewardship of freshwater biodiversity. The proposed agenda aims to advance freshwater biodiversity research globally as a critical step in improving coordinated actions towards its sustainable management and conservation.

Determining The Trophic Role Of Red Snapper (Lutjanus Campechanus) In Mississippi State Waters Using Stomach Content And Stable Isotope Analysis, Branden Kohler

Master's Theses

The goal of this study was to determine the diet composition, trophic position and ecological role of red snapper (Lutjanus campechanus) in Mississippi state waters utilizing stable isotopes (δ¹³C and δ¹⁵N) and stomach content analysis. Stable isotope analysis of fish and their prey can provide information on species-specific basal resource utilization, diet composition and trophic position which can improve food web models and inform fisheries management decisions. Particulate organic matter (POM), the presumed base of the food web, red snapper muscle tissue, and red snapper stomach contents were collected from 25 sites in 2016 and …

The Power Struggle: Assessing Interacting Global Change Stressors Via Experimental Studies On Sharks, Ian A. Bouyoucos, Sue-Ann Watson, Serge Planes, Colin A. Simpfendorfer, Gail D. Schwieterman, Et Al

VIMS Articles

Ocean warming and acidification act concurrently on marine ectotherms with the potential for detrimental, synergistic effects; yet, effects of these stressors remain understudied in large predatory fishes, including sharks. We tested for behavioural and physiological responses of blacktip reef shark (Carcharhinus melanopterus) neonates to climate change relevant changes in temperature (28 and 31 °C) and carbon dioxide partial pressures (pCO₂; 650 and 1050 µatm) using a fully factorial design. Behavioural assays (lateralisation, activity level) were conducted upon 7–13 days of acclimation, and physiological assays (hypoxia tolerance, oxygen uptake rates, acid–base and haematological status) were …

Online Graduate Certificate In Fisheries Science, Joanna Burkhardt

Library Impact Statements

No abstract provided.

Assessing Populations Of Eastern Brook Trout (Salvelinus Fontinalis) Above And Below Waterfalls In Mountain Streams Of Virginia, Hannah Eisemann Macmillan

Masters Theses, 2010-2019

Anthropogenically driven factors, such as increasing temperature and sediment in valley streams, acidification of mountain streams, and the introduction of non-native trout, are restricting habitat suitable for healthy populations of eastern brook trout (Salvelinus fontinalis) throughout their native Appalachian range. Brook trout are important as predators of insects in mountain streams and as a favorite of anglers. It is crucial that remaining populations in sustainable habitats be identified and preserved. Waterfalls are geologic knickpoints preventing base-level lowering that create unique, stable landscapes above them, which may alleviate the temperature-productivity/acidity “habitat squeeze” for populations of brook trout and could …

A Hemimysis Driven Novel Ecosystem At A Modified Boulder Breakwall, Eric John Geisthardt

Theses and Dissertations

The US Army Corps of Engineers (USACE) is mandated to maintain and repair aging breakwall structures in all commercial ports on the Great Lakes. In May of 2014, the construction of Milwaukee Harbor USACE “green” breakwall (GBW) reconciliation created complex rocky aquatic habitat by depositing cobble-sized stone as a veneer over standard 6-10 ton boulders, thus creating “control” (boulder) and “treatment” (cobble) habitats. The breakwall is home to a prolific population of Hemimysis anomala, the introduced Ponto-Caspian mysid, which is significantly more abundant on cobble versus boulders (p<0.05, using a novel trap for Hemimysis). Fish and forage communities were sampled in 2015 and 2016 using a combination of experimental and micromesh gill nets, night scuba diving surveys, and a novel Hemimysis trap. This nearshore lithophilic mysid appears to provide a significant new seasonal food resource in the Milwaukee Harbor for pelagic prey fishes during inshore spawning migrations and upwelling events. Alewife (Alosa pseudoharengus) and rainbow smelt (Osmerus mordax) fed heavily on Hemimysis with some individuals consuming hundreds of mysids. Night scuba diving surveys and gill netting confirmed that rainbow smelt preferred to forage on the cobble section (p<0.05), and also consumed more Hemimysis there than they did at the control breakwall site (p<0.05). Hemimysis were also the primary food item consumed by nearshore game fishes such as YOY yellow perch (Perca flavescens), YOY largemouth bass (Micropterus salmoides), and juvenile rock bass (Ambloplites rupestris) caught at the breakwall. This study provides the first documented evidence that where abundant in the Laurentian Great Lakes, Hemimysis do have the ability to significantly impact local food webs and drive the feeding ecology of both pelagic transient and nearshore resident fishes.

Life History Of The Non-Native Invasive Red Lionfish (Pterois Volitans) In The Northern Gulf Of Mexico, Alexander Q. Fogg

Master's Theses

Invasive Red Lionfish (Pterois volitans) were first detected in the northern Gulf of Mexico (nGOM) in 2010 and since then their numbers have increased dramatically. From 2010 to 2015, more than 15,000 Red Lionfish were collected opportunistically from the nGOM for this study. Length and weight relationships differed significantly among ecoregions by sex and there was clear sexual dimorphism in size with males being larger and heavier. Red Lionfish age ranged from 0-4.5 years old and males achieved greater growth rate (K) and asymptotic maximum lengths (L_inf) compared to females and these parameters were also different …

Biotelemetry Of Cownose Rays In Chesapeake Bay: Habitat Use And Ray Movement, Robert A. Fisher

Reports

No abstract provided.

Movement Patterns And Catch-And-Release Impacts Of Striped Bass In A Tidal Coastal Embayment In Massachusetts, Heather M. Tyrrell

Masters Theses 1911 - February 2014

An investigation into the spatial ecology and effects of catch-and-release angling on the physiology and behavior of striped bass was conducted. Fine-scale behavior was assessed by tagging fish with acoustic transmitters equipped with pressure and tri-axial accelerometer sensors and tracking them within a fixed array (n=34 receivers) in a Massachusetts estuary. Activity space changed significantly over the course of the season and increased with water temperature. Striped bass most frequently exhibited low levels of locomotory activity representing 67% of total activity measurements, with occasional high activity and burst swimming, often within the upper 3 m of the water column. Depth …

The Natural Life History Of Cambarus (Puncticambarus) Smilax, The Greenbrier Crayfish, Paul William Hughes

Theses, Dissertations and Capstones

The natural life history of Cambarus (Puncticambarus) smilax, the Greenbrier Crayfish, was studied in West Fork of the Greenbrier River and in Thorny Creek, a tributary of the main stem of the Greenbrier River. The Greenbrier Crayfish gets its name from the Greenbrier River watershed where it is thought to occur exclusively. Among described members of the subgenus Puncticambarus, C. smilax is a sister taxon most similar to Cambarus (Puncticambarus) robustus. Monthly collections were made within the two study sites, from August 2010 to July 2011. Collecting techniques included dip-netting, seine-netting, and hand collecting. Cambarus smilax and all other species …

Shovelnose Sturgeon Reproductive Ecology In The Lower Platte River, Nebraska, Mathew L. Rugg

School of Natural Resources: Dissertations, Theses, and Student Research

Biodiversity and abundance of freshwater organisms are experiencing drastic declines. Anthropogenic disturbances have altered the natural flow regimes of large rivers, and have led to declines in species that rely on elements of natural flow. Similarly, shovelnose sturgeon distribution has diminished in the last 100 years due to habitat alteration, overharvest, and water contamination. To fully understand the status and viability of a fish population, basic knowledge of a fish’s reproductive strategy is needed. Aspects of reproduction that should be understood to manage for sustainability include maturation, fecundity, and spawning dynamics. There is currently little published information on age/size of …

The Effects Of Calcium Concentration And Food Levels On Daphnia, Fawn Goodberry

Biology Theses

Many physiological processes of Daphnia are negatively affected at low calcium concentrations. The concentration of calcium within lake water influences how Daphnia populations will survive and reproduce in natural environments. An experiment was designed to test the effects of calcium concentration and food level on the growth and reproduction of a Daphnia hybrid. Daphnia pulex x Daphnia pulicaria were reared in a soft water medium at three calcium concentrations (2.5mg/L, 1.0mg/L, 0.50mg/L) and high and low food levels (5.6 x 10⁵ and 5.6 x 10⁴ cells of the algae Ankistrodesmus sp.) in a 2 x 3 factorial …

Ecology Of Glacial Relict Fishes In South Dakota's Sandhills Region, Eli Felts

Electronic Theses and Dissertations

Native stream fish zoogeography has changed substantially across North America during the last century as habitat degradation, stream fragmentation and introductions of nonnative species have led to numerous extinctions, extirpations and altered distributions. Insufficient information regarding imperiled species often results in reactive, rather than proactive, management, and knowledge of species status and ecology is critical in identifying conservation priorities. South Dakota populations of three dace species (northern redbelly dace Chrosomus eos, finescale dace Chrosomus neogaeus, and pearl dace Margariscus margarita) are relict of Pleistocene Glaciation and are isolated from the northern core of their distribution, but little information exists regarding …

Evaluating The Utility Of Beaver Reintroduction Programs For Enhancing Habitat For Rainbow Trout And Steelhead, Jonathan Rodger Hegna

All Master's Theses

Beaver reintroduction programs are increasingly being viewed as a way to enhance salmonid habitat and production. However, the actual effectiveness of using beavers as a habitat enhancement tool for ESA listed steelhead Oncorhynchus mykiss populations is unknown. We examined the type of habitat, at both the microhabitat and mesohabitat levels, preferred by steelhead in three small streams in the upper Yakima Basin, WA through standard snorkel surveys and habitat measurements. Our results suggest that steelhead in small streams strongly prefer (relative to availability) microhabitats that have deeper water(> 30 cm), slow stream velocities(< 0 .05 mis), and complex cover types. Habitat partitioning among the size-classes (small< 50 mm, medium 50-90 mm, large> 90 mm total length, TL) principally operated …

Freshwater Phytoplankton Populations Detected Using High Pressure Liquid Chromatography (Hplc) Of Taxon-Specific Pigments, Lauren Jeanne Simmons

Theses and Dissertations

Phytoplankton are key primary producers in aquatic ecosystems, and the principle food source for primary consumers. Individual phytoplankton species respond to different physical, chemical and biological parameters, so monitoring taxonomic composition of the phytoplankton community is a means to monitor changes in environmental conditions. Phytoplankton community changes have frequently been monitored by estimating biomass (using chlorophyll a, measured fluorometrically), and taxonomic data obtained from cell counts. While such methods are useful, they are time-consuming. I hypothesized that high pressure liquid chromatography (HPLC) methods, which have been frequently used in marine systems, would allow separation and identification of key pigments. …

Western Rock Lobster Ecology – The State Of Knowledge - Marine Stewardship Council - Principle 2: Maintenance Of Ecosystem, Lynda M. Bellchambers, P Mantel, Arani Chandrapavan, Matthew B. Pember, Scott Evans

Fisheries research reports

The commercial fishery is managed in three zones: south of latitude 30°S (Zone C), north of latitude 30°S (Zone B) and a third offshore zone (Zone A) around the Abrolhos Islands (Figure 1.3). Effort is evenly split between the southern and northern zones through the implementation of management controls aimed at addressing zone-specific issues. These issues include different maximum size restrictions and seasonal opening and closing dates. This report focuses on the state of the western rock lobster ecology at the date of publication.

Environmental And Endogenous Factors Influencing Emigration In Juvenile Anadromous Alewives, Benjamin I. Gahagan, Eric T. Schultz, Katie E. Gherard

EEB Articles

We analyzed juvenile anadromous alewife migration at Bride Lake, a coastal lake in Connecticut, during summer 2006 and found that migration on 24-hour and seasonal timescales was influenced by conditions of the environment and characteristics of the individual. To identify environmental cues of juvenile migration, we continuously video recorded fish at the lake outflow and employed information-theoretic model selection to identify the best predictors of daily migration rate. More than 80% of the approximately 320,000 juveniles that migrated from mid-June to mid-August departed in three pulses lasting one or two days. Pulses of migration were associated with precipitation events, transient …

Population Assessment Of Eastern Oysters (Crassostrea Virginica) In The Seaside Coastal Bays, Paige G. Ross, Mark Luckenbach

Reports

Declines of oyster populations and commercial harvest from the Virginia seaside coastal bays have followed similar patterns, though not as severe, as those in Chesapeake Bay. High prevalence of Dermo disease (Perkinsus marinus) and MSX disease (Haplosporidium nelsoni) coupled with over harvest and habitat destruction have dramatically reduced populations. Nevertheless, there are several promising signs that significant enhancement of the population could be achieved with well conceived restoration efforts. Oyster habitat and population distribution were examined in the coastal bay system on the seaside of the Eastern Shore of Virginia. This system is composed of barrier islands, salt marshes, broad …

Evaluation Of Pre-Spawning Movements Of Anadromous Alewives In The Ipswich River Using Radiotelemetry, Holly J. Frank

Masters Theses 1911 - February 2014

Conserving and restoring anadromous fish populations is an important research and management priority. For conservation to be effective, researchers must understand the behavior of the fish they seek to restore. Telemetry has allowed researchers to understand the upstream migrations of these fish in freshwater, how migration patterns vary, and if there is a relationship between behavior and environmental variables. In the northeastern United States, alewife (Alosa pseudoharengus), one of two species collectively referred to as river herring, has historically been an important component of coastal rivers. However, populations of these fish have experienced recent declines, and a commonly used method …

Variation In Winter Estuarine Habitat Use By Bluefish In Northeastern Florida With Implications For Growth And Condition, John S. Murt

Masters Theses 1911 - February 2014

Age and growth were determined from otoliths for 181 juvenile bluefish, Pomatomus saltatrix, collected using a variety of gear in northeast Florida during 2003 and 2005. Three distinct cohorts were identified recruiting to the near shore waters during spring, summer and fall. Growth rates were high regardless of cohort or season. To compare pre- and post-recruitment growth rates, models were fit to individual growth trajectories using change point analysis. Post-estuarine growth rates were generally higher. Growth rates and hatching times were within the range of those obtained in other bluefish studies conducted at higher latitudes. As this is the only …

Slides: "Mitaku Oyasin" Means "We Are All Related", Bob Gough

Shifting Baselines and New Meridians: Water, Resources, Landscapes, and the Transformation of the American West (Summer Conference, June 4-6)

Presenter: Bob Gough, NativeEnergy, Inc.

72 slides

Time Post-Hatch Caloric Value Of Artemia Salina, Jessie M. Sanders

Senior Honors Projects

In aquatic animal collections, such as those in the collection of Mystic Aquarium & Institute for Exploration’s Fish & Invertebrate department, live food is an essential part of the diet of animals that are on display, used in education, and kept in reserve for exhibits. For Mystic Aquarium’s Fish & Invertebrate department, newly hatched Artemia salina, or brine shrimp, are fed to an assortment of fishes and invertebrates, including soft corals and jellyfish. Hatch brine is an important source of fatty acids, which are essential for proper growth and development. Hatch brine starts encapsulated in a cyst form and are …

Bulletin No. 37: Living Resources And Habitats Of The Lower Connecticut River, Glenn D. Dreyer, Marcianna Caplis

Bulletins

No abstract provided.

Aquaculture Of Triploid Crassostrea Ariakensis In The Chesapeake Bay A Symposium Report, Eric Hallerman, Merrill Leffler, Sally Mills, Standish K. Allen Jr.

Reports

A Symposium Held at the College of William and Mary, Williamsburg, Virginia October 18-19, 2001

Seasonal Residence, Movement, And Activity Of Adult Tautog (Tautoga Onitis) In Lower Chesapeake Bay, John A. Lucy, M. D. Arendt

Reports

No abstract provided.

A Spatial And Temporal Analysis Of Riparian Vegetation Along Satus Creek On The Yakama Indian Reservation, Kathryn Gellenbeck

All Master's Theses

Satus Creek provides critical habitat for the Yakima River Basin steelhead. A diverse community of riparian vegetation is important for healthy fish habitat; vegetation changes can affect shade, cover, channel structure, water quality, and food availability. The purpose of this thesis is to analyze and illustrate riparian vegetation change, both temporally and spatially, along three separate reaches of Satus Creek. A Geographic Information Systems approach was applied to assess the vegetation change by comparing plant species composition and density on 1949 and 1995 aerial photographs. The GIS approach allowed patterns and trends in the vegetation to be identified. In less …