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Full-Text Articles in Life Sciences

A Historical Floristic Inventory Of Pine Rockland Fabaceae (Leguminosae), Adel L. Pena Nov 2017

A Historical Floristic Inventory Of Pine Rockland Fabaceae (Leguminosae), Adel L. Pena

FIU Electronic Theses and Dissertations

The objectives of this study were to investigate temporal changes in the diversity of pine rockland Fabaceae, induced by anthropogenic factors. Herbarium collections spanning 170 years were used to analyze species frequency and richness. The results indicated temporal fluctuations in diversity with frequency of native species highest previous to the year 1920, and exotic-invasive species richness peaking after the 1960s. The accompanying species list resulting from the inventory included 122 Fabaceae species, in 56 genera, with an additional 19 species not previously listed for pine rocklands. The results emphasize the damage caused by early and deliberate introductions of exotic species, …


Reef Fish Biodiversity In The Florida Keys National Marine Sanctuary, Megan E. Hepner Nov 2017

Reef Fish Biodiversity In The Florida Keys National Marine Sanctuary, Megan E. Hepner

USF Tampa Graduate Theses and Dissertations

The biological diversity of reef-fish in the Florida Keys National Marine Sanctuary (FKNMS) from 1999 – 2016 was evaluated in terms of abundance, biomass, species richness, evenness, Shannon diversity, Simpson diversity, and functional diversity, using observations collected by multiple agencies and institutions under the Reef Visual Census (RVC) program. To compare the different diversity indices species richness, Shannon diversity, Simpson diversity, and functional diversity were converted into effective number of species. I examined the seven indices by no-take marine zones, in seven benthic habitat strata, and across the three-distinct geographic subregions in the Florida Keys domain (Upper, Middle, and Lower …


The Parasite Extinction Assessment & Red List: An Open-Source, Online Biodiversity Database For Neglected Symbionts, Colin J. Carlson, Oliver C. Muellerklein, Anna J. Phillips, Kevin R. Burgio, Giovanni Castaldo, Carrie A. Cizauskas, Graeme S. Cumming, Tad Dallas, Jorge Doña, Nyeema Harris, Roger Jovani, Zhongqi Miao, Heather Proctor, Hyun Seok Yoon, Wayne M. Getz Sep 2017

The Parasite Extinction Assessment & Red List: An Open-Source, Online Biodiversity Database For Neglected Symbionts, Colin J. Carlson, Oliver C. Muellerklein, Anna J. Phillips, Kevin R. Burgio, Giovanni Castaldo, Carrie A. Cizauskas, Graeme S. Cumming, Tad Dallas, Jorge Doña, Nyeema Harris, Roger Jovani, Zhongqi Miao, Heather Proctor, Hyun Seok Yoon, Wayne M. Getz

Faculty Publications

Parasite conservation is a rapidly growing field at the intersection of ecology, epidemiology, parasitology, and public health. The overwhelming diversity of parasitic life on earth, and recent work showing that parasites and other symbionts face severe extinction risk, necessitates infrastructure for parasite conservation assessments. Here, we describe the release of the Parasite Extinction Assessment & Red List (PEARL) version 1.0, an open-access database of conservation assessments and distributional data for almost 500 macroparasitic invertebrates. The current approach to vulnerability assessment is based on range shifts and loss from climate change, and will be expanded as additional data (e.g., host-parasite associations …


Negative Density Dependence Mediates Biodiversity–Productivity Relationships Across Scales, Joseph A. Lamanna, R Travis Belote, Laura A. Burkle, Christopher P. Catano, Jonathan A. Myers Jul 2017

Negative Density Dependence Mediates Biodiversity–Productivity Relationships Across Scales, Joseph A. Lamanna, R Travis Belote, Laura A. Burkle, Christopher P. Catano, Jonathan A. Myers

Biology Faculty Publications & Presentations

Regional species diversity generally increases with primary productivity whereas local diversity–productivity relationships are highly variable. This scale-dependence of the biodiversity–productivity relationship highlights the importance of understanding the mechanisms that govern variation in species composition among local communities, which is known as β-diversity. Hypotheses to explain changes in β-diversity with productivity invoke multiple mechanisms operating at local and regional scales, but the relative importance of these mechanisms is unknown. Here we show that changes in the strength of local density-dependent interactions within and among tree species explain changes in β-diversity across a subcontinental-productivity gradient. Stronger conspecific relative to …


Using Maximum Entropy Species Distribution Modeling For Long-Term Conservation Planning Of Three Federally Listed Bats In North America, Mitchell L. Meyer May 2017

Using Maximum Entropy Species Distribution Modeling For Long-Term Conservation Planning Of Three Federally Listed Bats In North America, Mitchell L. Meyer

Master's Theses

We are currently in a sixth mass extinction event in which the extinction rate is higher than it has ever been. This mass extinction event is caused by human influence on the environment. Biodiversity is worth conserving because of its many uses to humans. Bats are a diverse group of mammals that humans rely on for pest control services. The gray bat, northern long-eared bat, and Indiana bat are on the Threatened and Endangered Species List and are in need of conservation. I built species distribution models using occurrence records, climate data, and Maximum entropy (MaxEnt) modeling technique. I predicted …


Vegetation Community Changes In Two National Forests In The Pineywoods, East Texas, Trisha L. Williams May 2017

Vegetation Community Changes In Two National Forests In The Pineywoods, East Texas, Trisha L. Williams

Electronic Theses and Dissertations

Despite extensive research into forest succession, little research has been directed to long-term studies. The fundamental properties of succession remain unclear and further research into terrestrial vegetation and an accounting of drivers in specific ecosystem types is required. This study addresses change in plant communities from five ecosystem types in two east Texas National Forests over a 20-year period. An analysis of 30 sample stands yields results due to various ecosystem drivers of vegetation change and uncovers plant community responses in multiple ecosystem types over this period. This research provided three key results: 1) that vegetation composition change occurs more …


Presence/Absence And Density Data For Epipelagic Tows From 48 Stations In The Northern Gulf Of Mexico From R/V Blazing Seven Cruises Lf2015a And Lf2015b June 2015 And July 2015, Jay R. Rooker, R.J. David Wells Mar 2017

Presence/Absence And Density Data For Epipelagic Tows From 48 Stations In The Northern Gulf Of Mexico From R/V Blazing Seven Cruises Lf2015a And Lf2015b June 2015 And July 2015, Jay R. Rooker, R.J. David Wells

DEEPEND Datasets

Larval catch data after the oil spill is being used to improve our understanding of the causes of temporal variability as it relates to the Deep Water Horizon oil spill (DWHOS). Bongo and neuston net tows were conducted at 48 stations in both June and July, 2015 in the northern Gulf of Mexico. Cruise data collected at each site included latitude/longitude, date, time and environmental data (temperature, salinity, dissolved oxygen). The occurrence and density of selected epipelagic (e.g., billfishes, tunas, dolphinfishes, flyingfishes) and deep pelagic (e.g., lanternfishes, bristlemouths, marine hatchetfishes) fish larvae were quantified and are being used to extend …


An On-Campus Botanical Tour To Promote Student Satisfaction And Learning In A University Level Biodiversity Or General Biology Course, Harish H. Ratnayaka Jan 2017

An On-Campus Botanical Tour To Promote Student Satisfaction And Learning In A University Level Biodiversity Or General Biology Course, Harish H. Ratnayaka

Faculty and Staff Publications

Outdoor, hands-on and experiential learning, as opposed to instruction-based learning in classroom, increases student satisfaction and motivation leading to a deeper understanding of the subject. However, the use of outdoor exercises in undergraduate biology courses is declining due to a variety of constraints. Thus, the goal of this paper is to describe a convenient, no-cost and flexible exercise using an on-campus botanical tour for strengthening specific knowledge areas of major plant groups. Its assessment on conduct and coverage, and student-perceived and actual knowledge gain is also described. Data presented derived from traditional biology undergraduates in sophomore year over nine fall …


Komarekiella Atlantica Gen. Et Sp. Nov. (Nostocaceae, Cyanobacteria): A New Subaerial Taxon From The Atlantic Rainforest And Kauai, Hawaii, Jeffrey R. Johansen, Guilherme Scotta Hentschke, Nicole Pietrasiak, Janaina Rigonato, Marli F. Fiore, Célia Leite Sant’Anna Jan 2017

Komarekiella Atlantica Gen. Et Sp. Nov. (Nostocaceae, Cyanobacteria): A New Subaerial Taxon From The Atlantic Rainforest And Kauai, Hawaii, Jeffrey R. Johansen, Guilherme Scotta Hentschke, Nicole Pietrasiak, Janaina Rigonato, Marli F. Fiore, Célia Leite Sant’Anna

2017 Faculty Bibliography

Six strains of Cyanobacteria sampled in the Brazilian Atlantic rainforest and one strain from Kauai, Hawaii, were studied using morphological and molecular approaches, including 16S rRNA gene phylogenies and 16S–23S ITS secondary structures, and are herein described as Komarekilla atlantica gen. et sp. nov.. Morphologically they are similar to Nostoc, Desmonostoc, Halotia, and Mojavia and indistinguishable from Chlorogloeopsis. The parsimony and Bayesian phylogenies of the 16S rDNA show that these strains are close to nostocacean strains, in strongly supported clades and separated from all other genera. The secondary structures of the 16S–23S ITS were very consistent between strains of K. …


Diversity And Evolution Of Fruits In Cuscuta (Dodders; Convolvulaceae), Anna Ho Jan 2017

Diversity And Evolution Of Fruits In Cuscuta (Dodders; Convolvulaceae), Anna Ho

Theses and Dissertations (Comprehensive)

Cuscuta (dodder) is a genus of roughly 200 species of obligate stem parasites with sub-cosmopolitan distribution. The fruit, generally regarded as a capsule, has a thin pericarp containing one to four seeds and opening at the base (circumscissile dehiscence; DE), or remaining closed (indehiscent; IN). IN has evolved multiple times in Cuscuta from DE, and is most common in the North American clades of subgenus Grammica. In addition, some species produce fruits that open irregularly. Characteristics pertaining to the fruits of Cuscuta are important as their seeds contribute most to their distribution and prevalence across the globe, and their reduced …