Life Sciences Commons^™

An Analysis Of The Demand For Rail Transportation Of Corn, Soybeans, And Wheat In South Dakota, Melinda Sommer

Electronic Theses and Dissertations

The cropping patterns, grain marketing flows, and transportation needs have changed in South Dakota as increased ethanol production has led to a significant increase in corn production and the production of distiller’s dried grains with solubles (DDGS) as a co-product. Previous studies have not focused specifically on the grain and oilseed transportation needs in South Dakota over an extended period of time that covers the influence of ethanol production. Quarterly rail data from the Surface Transportation Board Public Use Waybill Sample for 1991 to 2013 were used in a regression analysis of the demand for rail transportation of corn, soybeans, …

A Physiological Assessment Of Wetland Habitats For Spring-Migrating Ducks In The Agricultural Landscapes Of The Southern Prairie Pothole Region, Adam K. Janke

Electronic Theses and Dissertations

The conversion of grassland and wetland ecosystems in the Prairie Pothole Region (PPR) has been a pervasive challenge for conservationists dating back to the early 1900s. The legacy of ever-increasing agricultural intensity in the southern portions of the PPR, including eastern South Dakota, has left many wetland ecosystems in a matrix of intensive agricultural production. With little surrounding nesting cover, these wetlands are thought to have limited potential for waterfowl reproduction but may still play an important role facilitating migration of waterfowl en route to northern breeding areas during spring. My research sought to understand the contributions of wetlands in …

Investigating Grassland And Cropland Conversion Decisions In The Dakotas, 2015 Producers Survey And Analysis, Md Niaz Murshed Chowdhury

Electronic Theses and Dissertations

This study investigates grassland and cropland conversion decisions in the Dakotas. Data from a 2015 survey completed by 1,026 producers located in 57 counties of the Prairie Pothole Region (PPR) were used to evaluate land conversions. This thesis attempts to identify the land use conversion incidence and rate (grass to crop and crop to grass); the link between past and projected land use conversion decisions in the Dakotas, and determinants of land use conversion using different statistical tools, including logistic regression methods. A regional analysis of converted acres reveals that the grass to crop conversion rates (as percent of 2014 …

Diversity Of Free-Living Nitrogen Fixing Bacteria In The Badlands Of South Dakota, Bibha Dahal

Electronic Theses and Dissertations

Biological Nitrogen Fixation is carried out by a highly diverse group of members of the domains Bacteria and Archaea which express a nitrogenase enzyme complex and are termed diazotrophs. The best known diazotrophs form symbiotic associations with plants, but free-living nitrogen fixing bacteria also contribute a substantial amount of nitrogen to ecosystems, including arid lands. The aim of this study was to isolate free-living diazotrophs from the soil crusts of sod tables of South Dakota Badlands. Samples were obtained from sod tables and the surrounding base (matrix) in spring and fall of 2014. A culture dependent approach was used to …

A Fret Investigation Into Molecular Mechanisms Of Cardiac Troponin Activation In Reconstituted Thin Filaments, Maria Eleni Moutsoglou

Electronic Theses and Dissertations

Cardiomyopathies (CM) are the leading cause of death in America, and can develop from mutations in sarcomeric proteins, leading to altered protein structure and function. Current therapies target upstream signaling pathways to treat the symptoms of heart failure, but are associated with increased mortality by affecting downstream signaling pathways and other muscle types. Rational drug design can develop therapies to treat CM at the protein level. However, a detailed knowledge of how sarcomeric proteins regulate muscle contraction is required. Muscle contraction occurs through a cyclic interaction between actin thin and myosin thick filaments, regulated by intracellular Ca2+ concentration. Troponin (Tn), …

Distribution And Characterization Of The Soybean Cyst Nematode, Heterodera Glycines (Hg) Types In South Dakota, Krishna Acharya

Electronic Theses and Dissertations

The soybean cyst nematode (SCN), Heterodera glycines Ichinohe, is an endoparasitic nematode and one of the major pests of soybean (Glycine max L.) in the United State and all over the world where soybean is grown. SCN is ranked first among the biological factors that cause yield loss in soybean. The estimated yield loss by this nematode is $1b annually in the United States alone. SCN is thought to have been first found in China. It was first identified in the United States in 1954 in North Carolina and in South Dakota in 1995. To date, SCN continues to spread …

Proteomics Study Of Pre-Harvest Sprouting In Wheat, Pramod Khadka

Electronic Theses and Dissertations

Pre-harvest sprouting (PHS) of wheat (Triticum aestivum L.) is a condition characterized by the early germination of spikes during moist environmental conditions. PHS lowers yield, degrades the quality of grain and thus limits the profits of wheat producers groups. During this investigation, proteomics studies of PHS-resistant and PHS-susceptible wheat embryos were conducted at different imbibition time periods via a cutting-edge technology called iTRAQ. Proteomic analysis revealed that 190 differentially expressed proteins might be involved in various cellular functions, such as carbohydrate metabolism, nitrogen metabolism, stress response, redox regulation, ATP synthesis, and protein translation, during this untimely germination of the wheat …

Successful Weight Management: Barriers And Facilitators To Maintaining Weight After Weight Loss Via A Meal Replacement Program, Hope D. Kleine

Electronic Theses and Dissertations

Purpose: Meal replacement programs (MRPs) facilitate weight loss. Unfortunately, a large percentage of individuals that lose weight through MRP are not successful at maintaining their weight. Weight regain one year following weight loss via meal replacements has been as high as 40-50%, demonstrating a critical need to improve weight maintenance in MRP participants. Therefore, the purpose of this study is to identify barriers and facilitators of weight maintenance after reaching a goal weight in MRP participants.

Methods: Seven focus groups of ≤8 clients were conducted to discuss barriers and facilitators of weight maintenance prior to reaching a point of …

Senescence Of Native Perennial Warm Season Grasses Senescence Associated Switchgrass Transcriptome, Michaellong Tran

Electronic Theses and Dissertations

Senescence of perennial crops enable continuous harvests after one sowing event. Perennials senesce at adapted rates of their native environments; however, early senescencing crops do not maximize the growing season as nutrient reallocation takes precedence. Chlorophyll degradation and nitrogen reallocation was observed to occur rapidly between mid to late September. Transcriptome analysis on early and late senescencing switchgrass cultivars reveals upregulation of starch metabolism, light reactions, Calvin-Benson Cycle, and anthocyanin synthesis in late senescencing switchgrass. Morphological variations between the two germplasms prolong the growing season of late senescencing switchgrass, maximizing yield. Expression of mRNA as senescence progresses and between the …

Temporal And Spatial Influences On South Dakota Farm Economies Of Size, Henry Brown

Electronic Theses and Dissertations

Census of Agriculture data are evaluated to test for economies of size of South Dakota farms. Economies of size occur when per-unit costs decrease as the size of a firm increases. This research measures technical economies of size, which assume that all firms pay identical input prices and receive identical output prices. The dependent variable of the model is expenses per dollar of sales. This is a typical measure of efficiency in agricultural statistics. The data come from the four prior Census of Agriculture years, 1997, 2002, 2007, and 2012. A state-wide model and a county-wide model were developed to …

Longitudinal Examination Of Perceived Stress And Depression Symptomology In Division I Student-Athletes, Bobby Daigle

Electronic Theses and Dissertations

CONTEXT: Concussions are all too prevalent in amongst athletes. Concussions make up almost 5 percent of all collegiate athletic injuries. Concussions have been linked with many long lasting effects including depression and increased stress or anxiety.

OBJECTIVE: To longitudinally examine post-concussion depression and stress levels in National Collegiate Athletic Association Division 1 athletes.

DESIGN: Descriptive longitudinal study.

SETTING: National Collegiate Athletic Association Division I collegiate athletics.

PARTICIPANTS: Concussed and uninjured Division I collegiate athletes, ages 18-22, competing in football, women’s soccer, baseball, softball, and women’s track.

INTERVENTION(S): Participants completed the CES-D at baseline, 1 week, 1 month, and 3 months …

Fish Ladders Designed For Drop Culverts And Central Stoneroller Ecology Across A Latitudinal Gradient, John Arthur Lorenzen

Electronic Theses and Dissertations

Stream connectivity is essential for the persistence of fish populations and maintenance of fish assemblage structure. Stream-road crossings can become barriers resulting in a loss of connectivity. Creating innovative tools for fisheries managers to allow fish passage through barrier stream-road crossings is important worldwide as climate change may force range shifts to stay within thermal requirements. Understanding how populations and metapopulations respond to climate is important as fisheries managers can use this information to make informed management decisions in regards to climate change and possible range shifts. Thus, we developed and tested a fish ladder to retrofit barrier stream-road crossings …

Use Of Extraction Technologies In Food Safety Studies, Changling Qiu

Electronic Theses and Dissertations

Food safety has become a top concern in our society. The public in general is increasingly concerned about the safety of the food products they consume every day as more and more food contamination incidents and widespread recalls arise. It is necessary to trace any presence and/or the concentration levels of contaminants, pesticides, herbicides, or other harmful substances in food samples. Sample preparation is a crucial step in a food analytical method, as it takes up most of the total analysis time, contributing highly to the total cost of analysis and greatly influencing the results of the analysis. Traditional extraction …

Influence Of Cardiovascular Risk Factors On Remote Ischemic Preconditioning, Tiffany Trachte

Electronic Theses and Dissertations

A powerful therapy against microvascular endothelial ischemia-reperfusion injury is remote ischemic preconditioning (rIPC), which triggers tissue protection by exposing a limb to small cycles of vascular occlusion. Animal models indicate that CVD risk factors reduce the protective benefits of ischemic conditioning. However, there are no human studies investigating how a burden of risk factors interferes with rIPC to prevent endothelial injury. The purpose of the present study was to determine the influence of risk factor burden on the capacity of rIPC to prevent endothelial reperfusion injury in humans. Twenty-two (age: 45±14 yr., BMI: 31±8 kg/m2) sedentary adults (12 lower burden: …

The Effect Of Copper And Zinc Source On Pre-Weaning Performance Of Cows, Health And Performance Of Suckling Calves, And Post-Weaning Feedlot Performance, Carcass Composition, And Meat Quality Of Calves, Jesse Fulton

Electronic Theses and Dissertations

During gestation an elevated level of nutrient intake is required by the cow in order to meet the requirements of the maturing fetus and if these requirements are not met, changes in fetal development can occur. However, little is understood about the effects of gestational manipulation of specific nutrients, such as minerals, on progeny growth, performance and carcass traits. Previous research supports the hypothesis that minerals provided in an organic form should be more soluble and readily available to the body for absorption. Therefore the objectives of this study were to determine if source of gestational and post-natal Cu and …

Survival, Abundance, And Relative Predation Of Wild Rainbow Trout In The Deerfield Reservoir System, South Dakota, Jeremy L. Kientz

Electronic Theses and Dissertations

Rainbow Trout Oncorhynchus mykiss are routinely stocked in Black Hills streams and reservoirs to enhance angling opportunities for the public, however in most cases, hatchery-reared Rainbow Trout do not successfully recruit to establish natural populations. One exception is the Deerfield Reservoir system, where it is estimated that up to 25% of the Rainbow Trout population consists of naturally produced, wild Rainbow Trout. While recruitment of wild Rainbow Trout to the Deerfield Reservoir fishery does occur, annual stockings of 12,000 hatchery Rainbow Trout have continued. In recent years, adipose fin clips were used to identify hatchery Rainbow Trout stocked into Deerfield …

Evaluation Of The Hypothalamic Kisspeptin System Throughout The Estrous Cycle And During The Attainment Of Puberty In Gilts, Eric Steven Jolitz

Electronic Theses and Dissertations

Kisspeptin has been demonstrated to affect reproductive cyclicity and the attainment of puberty in multiple species, presumably through its actions on GnRH and LH, as demonstrated in other species. Kisspeptin administration causes increased plasma concentrations of LH in pigs, sheep, and rats. Two experiments were conducted to evaluate 1) the hypothalamic kisspeptin system throughout various days of the estrous cycle and 2) the hypothalamic kisspeptin system during the peripubertal period in gilts. In experiment 1, 40 crossbred gilts (191 d, 121 kg) were administered an intramuscular injection of PG600. Twelve days after the administration of PG600, gilts were fed 15 …

Soil Salinity Study In Northern Great Plains Sodium Affected Soil, Tulsi P. Kharel

Electronic Theses and Dissertations

Climate and land-use changes when combined with the marine sediments that underlay portions of the Northern Great Plains have increased the salinization and sodification risks. The objectives of this dissertation were to compare three chemical amendments (calcium chloride, sulfuric acid and gypsum) remediation strategies on water permeability and sodium (Na) transport in undisturbed soil columns and to develop a remote sensing technique to characterize salinization in South Dakota soils. Fortyeight undisturbed soil columns (30 cm x 15 cm) collected from White Lake, Redfield, and Pierpont were used to assess the chemical remediation strategies. In this study the experimental design was …

Changes In Wetland Conditions And Wetland Plant Communities In The Prairie Pothole Region After 50 Years, Ryann Cressey

Electronic Theses and Dissertations

Wetlands in Stutsman County, North Dakota were revisited after 50 years to assess changes in wetland conditions and plant communities within wetland zones in the Prairie Pothole Region. In 1961-1966, Robert E. Stewart and Harold A. Kantrud conducted a study to investigate the relationship of wetland plant communities to variations of water permanence and chemistry on three study areas: Crystal Springs, Cottonwood, and Mt. Moriah. Within in this region, a severe drought occurred in 1988- 1992 followed by the longest deluge starting in 1993 with wetlands still impacted today. In 2013 and 2014, I revisited 80 of the original wetlands …

Evaluation And Identification Of Soybean Aphid Resistance Sources And Mapping Of Soybean Aphid Resistance Loci In Early Maturing Soybean Germplasm Accessions, Siddhi Jeewan Bhusal

Electronic Theses and Dissertations

Soybean aphid (Aphis glycines Matsumura) has been a major pest of soybean [Glycine max (L.) Merr.] in North America particularly in the northern United States and three Canadian provinces. At least four biotypes of soybean aphid have been confirmed in the United States. Identification of soybean aphid resistance sources in early-maturing soybeans and genetic characterization of new sources of resistance will facilitate to expand the gene pool of soybean aphid resistance and thus will help to develop soybean aphid resistant cultivars. To identify new sources of resistance in early maturing soybeans, 330 soybean germplasm accessions from Maturity Group (MG) I, …

Colony Stimulating Factor-1 Receptor (Csf-1r) Expression, Degradation, And Signaling In Lipid-Laden Macrophages, Gregory Thompson

Electronic Theses and Dissertations

Atherosclerosis is a serious disease affecting a large portion of the world’s population. In atherosclerosis, macrophages become filled with lipid droplets and form fatty plaques in artery walls. The formation of these atherosclerotic plaques is dependent on the macrophage growth factor colony stimulating factor-1 (CSF-1); however, understanding the changes in CSF-1 signaling and related pathways in foam cells remain poorly investigated. Lipid-laden macrophages were formed through exposure of murine bone marrow derived macrophages to 100 μg/ml acetylated LDL for 24 h. Non-LDL treated macrophages were grown in parallel for each experiment and used for comparison. Immunofluorescent staining was used to …

Cooperation And Punishment In The Arbuscular Mycorrhizal Symbiosis: Implications For Resource Exchange & Biological Market Dynamics, Jerry A. Mensah

Electronic Theses and Dissertations

The arbuscular mycorrhizal (AM) symbiosis is arguably the world’s most abundant and important mutualism, and brings together the roots of the majority of land plants and AM fungi to great mutual advantage. The AM symbiosis can increase the uptake of nutrients, such as phosphorus (P) and nitrogen (N), and improves the abiotic and biotic stress resistance of the host plant. AM fungi have the potential to act as biofertilizers and bioprotectors in sustainable agriculture. However, despite its significance, the mechanisms that control the resource exchange between both partners in the arbuscular mycorrhizal symbiosis are largely unknown. The main aim of …

Evaluation Of Tillage, Crop Rotation, And Cover Crop Impacts On Corn Nitrogen Requirements In Southeastern South Dakota, Sara Louise Berg

Electronic Theses and Dissertations

Nitrogen (N) is a vital factor of corn (Zea mays) production. Previous work in South Dakota has shown that there is uncertainty as to whether nitrogen requirements are the same for corn raised under no-till (NT) versus conventional till (CT) production systems. The objective of this study was to evaluate whether N requirements continue to be greater under long-term NT versus CT production systems in southeastern South Dakota, while also considering effects from cover crops and crop rotation. This was a two year study conducted at the SDSU Southeast Research Farm near Beresford, SD; it was superimposed on a long-term …

Evaluation Of Flame Weeding In Southeastern South Dakota, Benjamin William Arlt

Electronic Theses and Dissertations

Weed management is the main yield-limiting factor in production of organic crops. Currently, organic producers have limited resources available for in-row weed management. Flame weeding has been recognized for its potential as one part of an integrated approach at weed management in organic systems. Flame weeding uses propane fueled torches to heat plant tissue and denature proteins, thus injuring or destroying the affected tissue. When properly timed, flame weeding can effectively be used for weed control in corn and soybean fields. Corn and soybean have both shown tolerances to flame weeding and minimal yield loss with well-managed and timed flame …

Raptors In Temperate Grasslands: Ecology Of Ferruginous Hawk, Golden Eagle, And Northern Harrier In The Northern Great Plains, Shubham Datta

Electronic Theses and Dissertations

Ferruginous hawks (Buteo regalis) are a grassland and shrubland obligate nesting raptor and prefer lightly grazed pasture or idle areas for nesting. Their population reportedly declines in number if more than 30% of an area is cultivated and they rarely nest in areas dominated by croplands. Golden eagles (Aquila chrysaetos) are long-lived raptors with high nest-site fidelity and relatively low reproductive success. Population trends of golden eagles in western United States are unclear although long-term monitoring of populations shows declines in occupancy and breeding performance. Northern harriers (Circus cyaneus) prefer relatively open grasslands and …

Enhancing The Industrial Potential Of Filamentous Cyanobacteria, Tylor J. Johnson

Electronic Theses and Dissertations

The objectives of this project were to improve the industrial potential of filamentous N2-fixing cyanobacteria by increasing its biofuel tolerance, and to evaluate the economic feasibility and environmental impacts of a theoretical, cyanobacteria-based biofuel production facility. To develop a method to quantify filamentous cyanobacteria in dilute culture media, a dual-stained fluorescence assay was evaluated. While the viable cell stain (SYTO® 9) was accurate, the non-viable cell stain (propidium iodide) also bound to viable cells. Additional non-viable cell stains were evaluated, but none were accurate at quantifying viability. Thus we concluded that the viable cell stain SYTO® 9 is a reliable …

Immune And Endocrine Modulations Associated With Enhanced Plant-Based Protein Diets Within Freshwater Fish Species, Timothy J. Bruce

Electronic Theses and Dissertations

The incorporation of bioprocessed soybean meals (BSBMs) as a protein replacement for marine-derived fish meal (MDFM) has gained momentum with the potential for aquafeed cost reduction, improved growth performance, and reducing exploitation on wild fish stocks. Further, potential health benefits and optimized production performance resulting from bioprocessed feed ingredients have led to research on the nutraceutical benefits of plant-based ingredients. A novel proprietary MBBM has been developed using a microbial conversion of carbohydrates into digestible protein and additional cellular components that have immunogenic potential. A series of five finfish feeding trials were conducted to investigate immunomodulation induced by the BSBM …

Corncob Grit Application As An Alternative To Control Weeds In Two Crop Production Systems, Mauricio Erazo-Barradas

Electronic Theses and Dissertations

Weed management is one of the most challenging production problems in organic cropping systems because of limited weed control methods. Grits, derived from agricultural residues, have been demonstrated to control weed seedlings selectively in corn. This research examined weed efficacy and crop yield of an integrated air-propelled abrasive corncob grit (for in-row weed control) at varying timings and frequencies and flame-weeding or cultivation (for between-row weed control) system in two corn production systems. In the first study efficacy of weed control was assessed with this approach in an organic corn silage production system established in Morris, MN in 2013 and …

Quantitative Trait Loci Analysis Of Low Temperature Responses In Grapevine F2 Population, Mani Awale

Electronic Theses and Dissertations

Freezing injury, caused by freezing temperatures in the late fall, midwinter, or early spring, can result in significant loss to grape growers. The damage may range from the partial damage of parts of the plants to the total death of the plant, and may vary between years. Freezing tolerance is a multi-genetic, complex quantitative trait that involves many related traits like dormancy induction, growth cessation, acclimation, deacclimation and bud break. Developing an understanding of the genetics behind the complex trait requires connecting the phenotype with the genotype to enable discovering the underlying genes that can contribute to quantifiable differences between …

Effects Of Small Intestinal Starch Digestion And Dietary Lipid On Efficiency Of Nitrogen Use In Cattle, Ethan J. Blom

Electronic Theses and Dissertations

The objective of this research was to determine the effects of increases in energy available for gain from increased small intestinal starch digestion (SISD) and dietary lipid source and amount on the efficiency of N use in cattle. Five ruminally, duodenally, and ileally cannulated steers were placed in a 5 × 5 Latin square. Each received duodenal infusion of 1.5 ± 0.08 kg/d raw cornstarch and either 0, 30.9 ± 0.59, 62.4 ± 1.16, or 120.4 ± 3.39 g/d Glu, or 387.9 ± 17.47 g/d casein. Casein increased (P = 0.05) SISD. Similarly, greater duodenal Glu linearly (P = 0.02) …