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Full-Text Articles in Life Sciences

Evaluation Of Parameter Estimation And Field Application Of Transgenerational Genetic Mark-Recapture, Ryan W. Whitmore Jan 2016

Evaluation Of Parameter Estimation And Field Application Of Transgenerational Genetic Mark-Recapture, Ryan W. Whitmore

Cal Poly Humboldt theses and projects

Use of a genetic-based analogue of the traditional mark-recapture method (transgenerational genetic mark-recapture, tGMR) is rapidly expanding as a means to estimate total escapement of Pacific salmon. The tGMR approach is similar to the simple Lincoln-Peterson mark-recapture method. In tGMR, adults returning to fresh water to spawn are collected in the first sampling occasion and their juvenile offspring that are migrating out to sea are collected during the second sampling occasion. Recaptures are determined by the number of parent-offspring pairs identified through genetic parentage analysis of the adult and juvenile collections. Two versions of tGMR are currently in use, referred …


Juvenile Survival And Adult Return As A Function Of Freshwater Rearing Life History For Coho Salmon In The Klamath River Basin, Molly Gorman Jan 2016

Juvenile Survival And Adult Return As A Function Of Freshwater Rearing Life History For Coho Salmon In The Klamath River Basin, Molly Gorman

Cal Poly Humboldt theses and projects

The Scott and Shasta rivers, Klamath River tributaries, experience spatial disparity in habitat quality in spring and summer as a result of historical and current land-use. Juvenile Coho Salmon (Oncorhynchus kisutch) born in the upper tributary reaches often rear in natal streams before migrating to sea. However, those born in the lower reaches often encounter unsuitable habitat and emigrate during their first spring to seek non-natal rearing habitats. It is assumed that these early outmigrants are population losses. This study evaluated first-summer survival, and contribution to the adult population, of non-natal rearing juveniles in the Klamath River Basin. …


Baseline Monitoring And Characterization Of Rocky Intertidal Fish Communities In Northern California, Kevin D. Hinterman Jan 2016

Baseline Monitoring And Characterization Of Rocky Intertidal Fish Communities In Northern California, Kevin D. Hinterman

Cal Poly Humboldt theses and projects

A network of new Marine Protected Areas (MPAs) has been established in northern California, covering 137 square miles of coastline, with the goal of maintaining commercially and recreationally important species and to preserve biodiversity. This is the first study in California to create a biodiversity and phylogenetic baseline of rocky intertidal fish communities within MPAs and nearby reference sites. Diversity, abundance, and size structure of intertidal fishes were compared among seven sites from Fort Bragg to Crescent City, CA during the summers and winters of 2014 and 2015. A total of 34 species were collected throughout sampling, just three less …