Life Sciences Commons^™

Mechanoregulation Of Leading Edge Pka Activity During Ovarian Cancer Cell Migration, Andrew J. Mckenzie

Graduate College Dissertations and Theses

Ovarian cancer is the deadliest of all the gynecologic cancers and is known for its clinically occult and asymptomatic dissemination. Most ovarian malignancies are diagnosed in the late stages of the disease and the high rate of morbidity is thought to be due, in part, to the highly metastatic nature of ovarian carcinomas. Cancer metastasis relies on the ability of cells to migrate away from primary tumors and invade into target tissues. Though the processes are distinct, cancer cell invasion relies on the underlying migration machinery to invade target tissues.

Cell migration requires the coordinated effort of numerous spatially-regulated signaling …

Role Of Heme Oxygenase In Modulating Expression Of Ros-Regulatory Enzymes In Medicago Truncatula, Parna Ghosh

Graduate College Dissertations and Theses

Heme Oxygenase (HO) is an enzyme universally found in animals, plants and microbes. In plants, the role of heme oxygenase in the synthesis of the phytochrome chromophore is well recognized and has been extensively studied; however its role in regulating reactive oxygen species (ROS) in plants is just beginning to be explored, particularly in legumes. Legumes interact with Rhizobium bacteria to form symbiotic nitrogen fixing nodules. ROS plays an important role in the development of roots as well as symbiotic nodules. In the model legume Medicago truncatula, ROS in the root is regulated in part by the LATD/NIP gene. …

The Impacts Of Multiple Anthropogenic Disturbances On The Montane Forests Of The Green Mountains, Vermont, Usa, Carolyn Ann Pucko

Graduate College Dissertations and Theses

How and why species’ ranges shift has long been a focus of ecology but is now becoming increasingly important given the current rate of climatic and environmental change. In response to global warming, species will need to migrate northward or upward to stay within their climatic tolerances. The ability of species to migrate will determine their fate and affect the community compositions of the future. However, to more accurately predict the future extent of species, we must identify and understand their responses to past and current climatic and environmental changes. The first place change is expected to occur is within …

Classical And Alternative Nuclear Factor-Kappab In Epithelium: Impacts In Allergic Airway Disease And Avenues For Redox Regulation, Jane Elizabeth Tully

Graduate College Dissertations and Theses

Nuclear Factor kappaB (NF-êB) is a transcription factor whose activation is increased in settings of allergic asthma. At least two parallel NF-êB pathways exist: the classical pathway, which plays a role in inflammation and cell survival, and the alternative pathway, which regulates lymphoid cell development and organogenesis. The classical NF-êB pathway regulates inflammatory responses derived from lung epithelial cells; however, the role of the alternative pathway in lung epithelial cells remains unclear. We demonstrate that both classical and alternative NF-êB are activated in lung epithelial cells in response to multiple pro-inflammatory agonists, and siRNA-mediated knockdown of alternative NF-êB proteins largely …

Transforming Organic Waste Into A Marketable Product: A Conjoint Analysis Of Bulk Compost Preferences And Strategies For Expanding The Compost Market In Vermont, Daniel Colin Keeney

Graduate College Dissertations and Theses

Organic waste management presents challenges and opportunities alike for community-based economic development. Waste-to-compost transformation can be socially and economically successful by employing ecological design principles, multi-stakeholder collaboration, and values-based supply chains (VCs). An analysis of commercial buyers' preferences for compost will inform approaches to forming effective partnerships of public, private and nonprofit stakeholders to develop a market for local waste resource products. The thesis summarizes the results of a consumer preferences survey of current and prospective bulk compost purchasers and discusses strategies for implementing new organic waste management policies that will strengthen a local market for compost, build social capital …

Functional Properties Of Whey Protein And Its Application In Nanocomposite Materials And Functional Foods, Helen Walsh

Graduate College Dissertations and Theses

Whey is a byproduct of cheese making; whey proteins are globular proteins which can be modified and polymerized to add functional benefits, these benefits can be both nutritional and structural in foods. Modified proteins can be used in non-foods, being of particular interest in polymer films and coatings. Food packaging materials, including plastics, can linings, interior coatings of paper containers, and beverage cap sealing materials, are generally made of synthetic petroleum based compounds. These synthetic materials may pose a potential human health risk due to presence of certain chemicals such as Bisphenol A (BPA). They also add to environmental pollution, …

An Analysis Of The Effect Of Ss-Hydroxy-Ss-Methylbutyrate On The Flight Ability And Lifespan Of Drosophila Melanogaster, Alexandra Elizabeth Beattie

Graduate College Dissertations and Theses

As muscle function deteriorates with age, the discovery of new ways to enhance the quality of human life by stunting inevitable aging processes, such as sarcopenia, is a subject of great interest to aging populations, to health care professionals and to nutritional companies. β-hydroxy-β-methylbutyrate (HMB) enhances muscle strength in humans and attenuates disease-induced and disuse-dependent atrophy in rodents. We investigated the feasibility of utilizing Drosophila as a model organism to study the biological effects of HMB in aging muscle. Using flight ability as an index of muscle function and monitoring the lifespan of flies, we found that normal food supplemented …

An Investigation Of Epigenetic Contributions To Inter-Animal And Age Dependent Variation In The Bovine Innate Immune Response., Benjamin Green

Graduate College Dissertations and Theses

Mastitis represents a major issue within the dairy industry responsible for economic loss via decreased animal productivity and associated veterinary costs. Currently, there is a push to identify a phenotypic innate immune response that will yield dairy cows with an enhanced resistance to mastitis. Bovine dermal fibroblasts were used as a cell model to measure the response of individuals to Gram-negative bacterial stimuli through the TLR4 signaling pathway. Fibroblast cultures were isolated from 15 dairy heifers at 5, 11, and 16 months of age in order to determine the variability in responsiveness to LPS as well as to monitor the …

Farmer Adoption Of Best Management Practices Using Incentivized Conservation Programs, Jennifer Christine Miller

Graduate College Dissertations and Theses

Many farms in the United States impose negative externalities on society. Population growth and the accompanying increase in demand for food further promote this trend of environmental degradation as a by-product of food production. The USDA's Environmental Quality Incentives Program (EQIP) provides financial assistance to farmers who wish to address natural resource concerns by making structural improvements or implementing best management practices (BMPs) on their farms. Regional examinations of program implementation and incentive levels are needed to evaluate the effectiveness of EQIP at both the farm and environmental level. This research addresses this need in the following two ways. First, …

A Novel Approach For The Identification Of Cytoskeletal And Adhesion A-Kinase Anchoring Proteins, Laura Taylor Director

Graduate College Dissertations and Theses

A-kinase anchoring proteins (AKAPs) are signaling scaffolds which provide spatial and temporal organization of signaling pathways in discrete subcellular compartments. Through tethering the cyclic-AMP dependent protein kinase A (PKA), AKAPs target PKA activity to distinct regions in the cell, bringing PKA in close proximity to its target proteins. This provides a high level of specificity and regulation of PKA and its role in mediating a number of biological processes, one of which is cell migration. Cell migration is a highly dynamic and fundamental process, when misregulated can lead to a number of pathologies. The process of cell migration requires integration …

Helicase-Ssb Interactions In Recombination-Dependent Dna Repair And Replication, Christian Jordan

Graduate College Dissertations and Theses

Dda, one of three helicases encoded by bacteriophage T4, has been well- characterized biochemically but its biological role remains unclear. It is thought to be involved in origin-dependent replication, recombination-dependent replication, anti- recombination, recombination repair, as well as in replication fork progression past template-bound nucleosomes and RNA polymerase. One of the proteins that most strongly interacts with Dda, Gp32, is the only single-stranded DNA binding protein (SSB) encoded by T4, is essential for DNA replication, recombination, and repair.

Previous studies have shown that Gp32 is essential for Dda stimulation of replication fork progression. Our studies show that interactions between Dda …

Trophic Dynamics And Cyanobacteria Blooms In Shallow Eutrophic Bays Of Lake Champlain, Rebecca Michelle Gorney

Graduate College Dissertations and Theses

This study was conducted to evaluate the relative roles of trophic dynamics and nutrient concentrations in the development of cyanobacteria blooms. The motivation for this research was to gain insights into how food webs respond to ecosystem-scale changes, using Lake Champlain as a case study. I sought to link field-based observations with experimentally derived data on mechanisms to better understand the processes that drive cyanobacteria blooms. My research addressed three specific topics: (1) associations among phytoplankton and nutrient concentration trends over time, (2) the impacts of planktivory by invasive fish on the ambient zooplankton community, and (3) the role of …

The Effectiveness Of An Online, Interactive, College Course In Energy Balance, Designed From A Framework Of Behavioral Theories, Simonne Marie Eisenhardt

Graduate College Dissertations and Theses

During late adolescence and the transition to college, students often experience weight increases and significant lifestyle changes including the adoption of unhealthy eating habits and decreased physical activity levels. To address this concern, a science-based, interactive course, designed from a framework of behavioral theories was developed to target improvements in energy balance knowledge and determinants of dietary and physical activity behaviors. The objective of this study was to assess the effectiveness of this course using a comparison group pre-test/post-test design. Thirty-three undergraduate students, ages 18-25, participated in the course, while twenty-six students served as controls. Paired samples t-tests compared pre- …

Mitochondrial Structure And Function As A Therapeutic Target In Malignant Mesothelioma, Brian Cunniff

Graduate College Dissertations and Theses

Malignant mesothelioma (MM) is a rare tumor associated with occupational exposure to asbestos with no effective treatment regime. Evaluation of mitochondrial function in human MM cell lines revealed a common tumor phenotype: in comparison to immortalized or primary human mesothelial cells, MM tumor cells displayed a more oxidized mitochondrial environment, increased expression of mitochondrial antioxidant enzymes, and altered mitochondrial metabolism. Earlier work by our laboratory indicated that increases in mitochondrial reactive oxygen species (mROS) in MM cell lines supports expression of FOXM1, an oncogenic transcription factor that contributes to increased cell proliferation and chemoresistance. These studies sought to investigate targeting …

Determining The Role Of The Ergic-53 Cargo Receptor Complex In Arenavirus Propagation, Joseph P. Klaus

Graduate College Dissertations and Theses

Arenaviruses and hantaviruses are human pathogens that cause significant morbidity and mortality. The current lack of vaccines and treatment options for these viruses is a global concern. Despite producing only 4 proteins, these viruses are able to maintain a persistent and asymptomatic infection in wild rodents while being continuously shed into the environment. In humans, these viruses cause a spectrum of diseases ranging from aseptic meningitis to severe hemorrhagic fever syndromes. Little is known about how arenavirus and hantavirus proteins engage and interact with the human proteome during the complex process of viral biogenesis, or how the interactions with human …

Estrogen Receptor Beta Is A Negative Regulator Of Mammary Cell Proliferation, Xiaozheng Song

Graduate College Dissertations and Theses

The mammary gland cell growth and differentiation are under the control of both systemic hormones and locally produced growth factors. Among all these important hormones and growth factors, estrogen plays a central role in mammary gland development. The biological function of estrogen is mediated by estrogen receptor α (ERα) and estrogen receptor β (ERβ). Both ERα and ERβ are expressed in the mammary gland, but with distinct expression patterns. In the mammary gland, ERα has been proved to be the estrogen receptor that mediates the mitogenic function of estrogen. However the function of ERβ in mammary cell proliferation is less …

Improved Recovery And Rapid Identification Of Strains, Mixed Strains, Mixed Species, And Various Physiological States Of Foodborne Pathogens Using Infrared Spectroscopy, Esmond Boafo Nyarko

Graduate College Dissertations and Theses

Challenges encountered in pathogen identification and detection include the genetic heterogeneity of strains within species of some foodborne pathogens, isolation of injured cells, mixed strains or mixed species contamination of foods, and differentiation between viable and dead cells. The first objective of this research was to evaluate an isolation medium that was based on time-delayed release (5 to 6 h) of selective agents in tablet format to a modified Listeria recovery enrichment broth (mLRB) medium for enhanced and rapid recovery of injured Listeria. The second objective involved the use of Fourier transform infrared (FT-IR) spectroscopy and chemometric analysis for the …

Molecular Characterization Of Purβ: A Purine-Rich Single-Stranded Dna-Binding Repressor Of Myofibroblast Differentiation, Amy Rumora

Graduate College Dissertations and Theses

The trans-differentiation of injury-activated fibroblasts to myofibroblasts is a process that provides contractile strength for wound closure. Persistent myofibroblast differentiation, however, is associated with fibrotic pathologies such as organ fibrosis, vascular remodeling, and atherosclerotic plaque formation. Myofibroblasts acquire a contractile phenotype with biochemical properties characteristic of both smooth muscle cells and stromal fibroblasts. The cyto-contractile protein, smooth muscle α-actin (SMαA) is a biomarker of myofibroblast differentiation. Expression of the SMαA gene, ACTA2, is regulated by cis-acting elements and transcription factors that activate or repress the ACTA2 promoter.

Purine-rich element binding proteins A (Purα) and B (Purβ) are sequence-specific, …

Modeling Consumption Rates Of Atlantic Herring (Clupea Harengus), Mitchell Jones

Graduate College Dissertations and Theses

Pelagic forage fishes play critical roles in productive marine food webs by providing a link between zooplankton and piscivores and transferring energy from feeding grounds to other ecosystems. The amount of energy moved to higher trophic levels or new systems is directly linked to the consumption rate of pelagic forage fishes. In the Gulf of Maine, Atlantic herring (Clupea harengus) is the dominant forage fish; the purpose of this study is to determine their specific consumption rate (g prey/g fish/day). Using fish collected in autumn 2012 and spring 2013, we applied a mercury mass-balance model to estimate individual …

Diversification Activities Of Vermont Dairy Farmers: A Study Of Raw Milk And Local Beef Processing In The State., Ryan Leamy

Graduate College Dissertations and Theses

The vast majority of earned agricultural dollars in Vermont come from the dairy industry, but with volatility in the market in recent years, including rising costs of feed and the fluctuating price of milk, state officials have begun to recommend diversification of farm activities to instill resiliency into the system. The research presented in this thesis explores two avenues for diversification, farm-to-consumer sales of raw milk and local beef production.

The second chapter utilizes diffusion theory to understand the prevalence of raw milk consumption in Vermont, develop a profile of the raw milk consumer, document the motivations of raw milk …

Local Mate Competition And The Sex Ratios Of Malaria Parasites, With A Focus On Plasmodium Mexicanum, Allison T. Neal

Graduate College Dissertations and Theses

Sex ratio theory is a focus in evolutionary biology that explores how natural selection shapes investment in males and females. It has provided some of the best quantitative evidence of evolution and could find utility in public health efforts through its application to malaria parasites. These parasites have distinct male and female forms that are produced following massive asexual replication, and they mate within the blood-feeding insects that transmit them between vertebrate hosts. A very similar population structure is assumed by local mate competition (LMC), a model from sex ratio theory that predicts female-biased sex ratios dependent on the degree …

Regulation Of Β-Casein Gene Expression By Octamer Transcription Factors And Utilization Of Β-Casein Gene Promoter To Produce Recombinant Human Proinsulin In The Transgenic Milk, Xi Qian

Graduate College Dissertations and Theses

β-Casein is a major milk protein, which is synthesized in mammary alveolar secretory epithelial cells (MECs) upon the stimulation of lactogenic hormones, mainly prolactin and glucocorticoids (HP). Previous studies revealed that the proximal promoter (-258 bp to +7 bp) of the β-casein gene is sufficient for induction of the promoter activity by HP. This proximal region contains the binding sites for the signal transducer and activator of transcription 5 (STAT5), glucocorticoid receptor (GR), and octamer transcription factors (Oct). STAT5 and GR are essential downstream mediators of prolactin and glucocorticoid signaling, respectively. This study investigated the functions of Oct-1 and Oct-2 …

Exploring The Nature Of Crystals In Cheese Through X-Ray Diffraction, Gil Fils Tansman

Graduate College Dissertations and Theses

The optimization of powder x-ray diffraction (PXRD) for the study of cheese crystals was the focus of this study. A survey was conducted of various manifestations of calcium lactate crystals on the rindless surface and within mechanical openings of Cheddar cheese using PXRD. The diffraction reference card database contained a card that was entitled calcium lactate pentahydrate and corresponded to some of the crystalline material found on the cheeses. Diffractions patterns generated from other samples of crystalline material revealed the existence of an unknown crystal that resembled and behaved similarly to calcium lactate pentahydrate, but did not match the reference …

Understanding And Improving Microbial Biofuel Tolerance As A Result Of Efflux Pump Expression Through Genetic Engineering And Mathematical Modeling, William James Turner

Graduate College Dissertations and Theses

Recent advances in synthetic biology have enabled the construction of non-native metabolic pathways for production of next-generation biofuels in microbes. One such biofuel is the jet-fuel precursor α-pinene, which can be processed into high-energy pinene dimers. However, accumulation of toxic biofuels in the growth medium limits the possible fuel yield. Overexpression of transporter proteins such as efflux pumps can increase tolerance to biofuels by pumping them out of the cell, thus improving fuel yields. However, too many efflux pumps can compromise the cell as well, creating a trade-off between biofuel toxicity and pump toxicity. In this work we improve the …

Investigations Into Host-Specific Interactions And Local Adaptation In The Mycorrhizal Symbiosis, Jonathan Gonzalez

Graduate College Dissertations and Theses

Mycorrhizal fungi are soil-borne organisms that form symbiotic associations with the majority of land plants. These fungi gather and exchange mineral nutrients with plants for photosynthetically derived carbohydrates. Mycorrhizal fungi can also confer other benefits onto plants, e.g. defense against pathogens, improved water relations, tolerance to heavy metal toxicity and herbivory. The influence of mycorrhizal fungi on plant mineral nutrition and response to stress suggests that these organisms may have a role to play sustainable agriculture as well as in bioremediation and ecosystem restoration.

In contributing to this important research, I investigated host-specific interactions between mycorrhizal fungi and the sex …