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Full-Text Articles in Life Sciences

Louisiana: A Model For Advancing Regional E-Research Through Cyberinfrastructure, Daniel S. Katz, Gabrielle Allen, Ricardo Cortez, Carolina Cruz-Neira, Raju Gottumukkala, Zeno D. Greenwood, Les Guice, Shantenu Jha, Ramsesh Kolluru, Tevfik Kosar, Lonnie Leger, Honggao Liu, Charlie Mcmahon, Jarek Nabrzyski, Bety Rodriguez-Milla, Ed Seidel, Greg Speyrer, Michael Stubblefield, Brian Voss, Scott L. Whittenburg Jun 2009

Louisiana: A Model For Advancing Regional E-Research Through Cyberinfrastructure, Daniel S. Katz, Gabrielle Allen, Ricardo Cortez, Carolina Cruz-Neira, Raju Gottumukkala, Zeno D. Greenwood, Les Guice, Shantenu Jha, Ramsesh Kolluru, Tevfik Kosar, Lonnie Leger, Honggao Liu, Charlie Mcmahon, Jarek Nabrzyski, Bety Rodriguez-Milla, Ed Seidel, Greg Speyrer, Michael Stubblefield, Brian Voss, Scott L. Whittenburg

Chemistry and Biochemistry Faculty Publications

Louisiana researchers and universities are leading a concentrated, collaborative effort to advance statewide e-Research through a new cyberinfrastructure: computing systems, data storage systems, advanced instruments and data repositories, visualization environments and people, all linked together by software programs and high-performance networks. This effort has led to a set of interlinked projects that have started making a significant difference in the state, and has created an environment that encourages increased collaboration, leading to new e-Research. This paper describes the overall effort, the new projects and environment and the results to date.


Emissions From Biomass Burning In The Yucatan, Robert J. Yokelson, J. D. Crounse, P. F. Decarlo, T. Karl, S. P. Urbanski, E. Atlas, T. Campos, Y. Shinozuka, V. Kasputin, A. D. Clarke, A. Weinheimer, D. J. Knapp, D. D. Montzka, J. Holloway, P. Weibring, F. Flocke, W. Zheng, D. Toohey, P. O. Wennberg, C. Wiedinmyer, L. Mauldin, A. Fried, D. Richter, J. Walega, J. L. Jimenez, K. Adachi, P. R. Buseck, S. R. Hall, R. Shetter Jan 2009

Emissions From Biomass Burning In The Yucatan, Robert J. Yokelson, J. D. Crounse, P. F. Decarlo, T. Karl, S. P. Urbanski, E. Atlas, T. Campos, Y. Shinozuka, V. Kasputin, A. D. Clarke, A. Weinheimer, D. J. Knapp, D. D. Montzka, J. Holloway, P. Weibring, F. Flocke, W. Zheng, D. Toohey, P. O. Wennberg, C. Wiedinmyer, L. Mauldin, A. Fried, D. Richter, J. Walega, J. L. Jimenez, K. Adachi, P. R. Buseck, S. R. Hall, R. Shetter

Chemistry and Biochemistry Faculty Publications

In March 2006 two instrumented aircraft made the first detailed field measurements of biomass burning (BB) emissions in the Northern Hemisphere tropics as part of the MILAGRO project. The aircraft were the National Center for Atmospheric Research C-130 and a University of Montana/US Forest Service Twin Otter. The initial emissions of up to 49 trace gas or particle species were measured from 20 deforestation and crop residue fires on the Yucatan peninsula. This included two trace gases useful as indicators of BB (HCN and acetonitrile) and several rarely, or never before, measured species: OH, peroxyacetic acid, propanoic acid, hydrogen peroxide, …


Biomass Burning And Urban Air Pollution Over The Central Mexican Plateau, J. D. Crounse, P. F. Decarlo, Donald R. Blake, L. K. Emmons, T. L. Campos, E. C. Apel, A. D. Clarke, A. J. Weinheimer, D. C. Mccabe, Robert J. Yokelson, J. L. Jimenez, P. O. Wennberg Jan 2009

Biomass Burning And Urban Air Pollution Over The Central Mexican Plateau, J. D. Crounse, P. F. Decarlo, Donald R. Blake, L. K. Emmons, T. L. Campos, E. C. Apel, A. D. Clarke, A. J. Weinheimer, D. C. Mccabe, Robert J. Yokelson, J. L. Jimenez, P. O. Wennberg

Chemistry and Biochemistry Faculty Publications

Observations during the 2006 dry season of highly elevated concentrations of cyanides in the atmosphere above Mexico City (MC) and the surrounding plains demonstrate that biomass burning (BB) significantly impacted air quality in the region. We find that during the period of our measurements, fires contribute more than half of the organic aerosol mass and submicron aerosol scattering, and one third of the enhancement in benzene, reactive nitrogen, and carbon monoxide in the outflow from the plateau. The combination of biomass burning and anthropogenic emissions will affect ozone chemistry in the MC outflow.


Loop Dynamics Of The Extracellular Domain Of Human Tissue Factor And Activation Of Factor Viia, Agnese S. Minazzo, Reuben C. Darlington, J. B. A. Ross Jan 2009

Loop Dynamics Of The Extracellular Domain Of Human Tissue Factor And Activation Of Factor Viia, Agnese S. Minazzo, Reuben C. Darlington, J. B. A. Ross

Chemistry and Biochemistry Faculty Publications

In the crystal structure of the complex between the soluble extracellular domain of tissue factor (sTF) and activesite- inhibited VIIa, residues 91 and 92 in the Pro79-Pro92 loop of sTF interact with the catalytic domain of VIIa. It is not known, however, whether this loop has a role in allosteric activation of VIIa. Time-resolved fluorescence anisotropy measurements of probes covalently bound to sTF mutants E84C and T121C show that binding uninhibited Factor VIIa affects segmental motions in sTF. Glu84 resides in the Pro79-Pro92 loop, and Thr121 resides in the turn between the …


Arbuscular Mycorrhizal Fungi: Factors Affecting Soil Organic Matter Storage, Carl Lee Rosier Jan 2009

Arbuscular Mycorrhizal Fungi: Factors Affecting Soil Organic Matter Storage, Carl Lee Rosier

Graduate Student Theses, Dissertations, & Professional Papers

Arbuscular mycorrhizal fungi (AMF) are soil fungi forming symbiotic associations with majority of land plants. AMF alter soil organic matter (SOM) directly through stabilization of soil aggregates and indirectly providing a path in which plant fixed C02 is transferred below-ground. Understanding contributions of AMF to SOM via protein production and stabilization of soil aggregates will greatly aid our understanding of soil carbon sequestration, nutrient cycling and mitigation of soil erosion. The work presented in chapter 2 challenges the glomalin extraction process and assesses the accuracy of the Bradford and monoclonal-antibody ELISA detection methods. My results clarify the contribution of glomalin …