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North Atlantic Vibrio Vulnificus Surveillance From Postharvest Oysters At A Us Shellfish Processing Facility, Kenneth Lavalley, Joseph Dealteris, Michael Rice, Marta Gomez-Chiarri Dec 2013

North Atlantic Vibrio Vulnificus Surveillance From Postharvest Oysters At A Us Shellfish Processing Facility, Kenneth Lavalley, Joseph Dealteris, Michael Rice, Marta Gomez-Chiarri

Marta Gomez-Chiarri

Postharvest surveillance for Vibrio vulnificus by a commercial processing facility was conducted from May 2001 to September 2003. Harvest areas included the Delaware Bay, Long Island Sound and Prince Edward Island. Occurrence followed a seasonal distribution. Low densities were observed in June, increased through August, and became rare by September. Given the ubiquitous nature of marine Vibrios, it was not surprising to find V. vulnificus everywhere, which was investigated. Observations confirmed the importance of strict time/temperature and product handling practices by shellfish harvesters, dealers and processors. Mishandling led to a potentially dangerous and uncharacteristically high V. vulnificus observation.


Proteome Of Geobacter Sulfurreducens Through Genome-Wide Expression Data And Sequence Analysis, Derek Lovley, Yan-Huai Ding, Kim Hixson, Muktak Aklujkar, Mary Lipton, Richard Smith, Tϋnde Mester Mar 2012

Proteome Of Geobacter Sulfurreducens Through Genome-Wide Expression Data And Sequence Analysis, Derek Lovley, Yan-Huai Ding, Kim Hixson, Muktak Aklujkar, Mary Lipton, Richard Smith, Tϋnde Mester

Muktak Aklujkar

No abstract provided.


Impact Of An External Energy On Staphylococcus Epidermis [Atcc –13518] In Relation To Antibiotic Susceptibility And Biochemical Reactions – An Experimental Study, Mahendra Kumar Trivedi, Shrikant Patil Oct 2008

Impact Of An External Energy On Staphylococcus Epidermis [Atcc –13518] In Relation To Antibiotic Susceptibility And Biochemical Reactions – An Experimental Study, Mahendra Kumar Trivedi, Shrikant Patil

Mahendra Kumar Trivedi

Purpose
While spiritual and mental energies are known to man, their impact has never been scientifically measurable in the material world and they remain outside the domain of science. The present experiment on Staphylococcus epidermis [ATCC –13518], validate the effects of such energy transmitted through a person, Mr. Mahendrakumar Trivedi, which has produced an impact measurable in scientifically rigorous manner.

Methods
Staphylococcus epidermis strains in revived and lyophilized state were subjected to spiritual energy transmitted through thought intervention and/or physical touch of Mr. Trivedi to the sealed tubes containing strain, the process taking about 3 minutes and were analyzed within …


Effects Of Oral Consumption Of The Green Tea Polyphenol Egcg In A Murine Model For Human Sjogren's Syndrome, An Autoimmune Disease., K. Gillespie, I. Kodani, D. Dickinson, K. Ogbureke, A. Camba, M. Wu, S. Looney, Tin-Chun Chu, H. Qin, F. Bisch, M. Sharawy, G. Schuster, S. Hsu Sep 2008

Effects Of Oral Consumption Of The Green Tea Polyphenol Egcg In A Murine Model For Human Sjogren's Syndrome, An Autoimmune Disease., K. Gillespie, I. Kodani, D. Dickinson, K. Ogbureke, A. Camba, M. Wu, S. Looney, Tin-Chun Chu, H. Qin, F. Bisch, M. Sharawy, G. Schuster, S. Hsu

Tin-Chun Chu, Ph.D.

No abstract provided.


Highly Conserved Genes In Geobacter Species With Expression Patterns Indicative Of Acetate Limitation, Derek Lovley, Carla Risso, Barbara A. Methé, Hila Elifantz, Dawn E. Holmes Aug 2008

Highly Conserved Genes In Geobacter Species With Expression Patterns Indicative Of Acetate Limitation, Derek Lovley, Carla Risso, Barbara A. Methé, Hila Elifantz, Dawn E. Holmes

Carla Risso

Analysis of the genome of Geobacter sulfurreducens revealed four genes encoding putative symporters with homology to ActP, an acetate transporter in Escherichia coli. Three of these genes, aplA, aplB and aplC, are highly similar (over 90 % identical) and fell within a tight phylogenetic cluster (Group I) consisting entirely of Geobacter homologues. Transcript levels for all three genes increased in response to acetate limitation. The fourth gene, aplD, is phylogenetically distinct (Group II) and its expression was not influenced by acetate availability. Deletion of any one of the three genes in Group I did not significantly affect acetate-dependent growth, suggesting …


North Atlantic Vibrio Vulnificus Surveillance From Postharvest Oysters At A Us Shellfish Processing Facility, Kenneth Lavalley, Joseph Dealteris, Michael Rice, Marta Gomez-Chiarri Jun 2008

North Atlantic Vibrio Vulnificus Surveillance From Postharvest Oysters At A Us Shellfish Processing Facility, Kenneth Lavalley, Joseph Dealteris, Michael Rice, Marta Gomez-Chiarri

Michael A Rice

Postharvest surveillance for Vibrio vulnificus by a commercial processing facility was conducted from May 2001 to September 2003. Harvest areas included the Delaware Bay, Long Island Sound and Prince Edward Island. Occurrence followed a seasonal distribution. Low densities were observed in June, increased through August, and became rare by September. Given the ubiquitous nature of marine Vibrios, it was not surprising to find V. vulnificus everywhere, which was investigated. Observations confirmed the importance of strict time/temperature and product handling practices by shellfish harvesters, dealers and processors. Mishandling led to a potentially dangerous and uncharacteristically high V. vulnificus observation.


Rules Of Engagement: Interspecies Interactions That Regulate Microbial Communities, Ainslie Little, Courtney Jaime Robinson, S Brook Peterson, Kenneth F. Raffa, Jo Handelsman May 2008

Rules Of Engagement: Interspecies Interactions That Regulate Microbial Communities, Ainslie Little, Courtney Jaime Robinson, S Brook Peterson, Kenneth F. Raffa, Jo Handelsman

Courtney Robinson

Microbial communities comprise an interwoven matrix of biological diversity modified by physical and chemical variation over space and time. Although these communities are the major drivers of biosphere processes, relatively little is known about their structure and function, and predictive modeling is limited by a dearth of comprehensive ecological principles that describe microbial community processes. Here we discuss working definitions of central ecological terms that have been used in various fashions in microbial ecology, provide a framework by focusing on different types of interactions within communities, review the status of the interface between evolutionary and ecological study, and highlight important …


Writing Research Proposal: Literature Review And Database Search, Mamoudou H. Dicko Prof. May 2008

Writing Research Proposal: Literature Review And Database Search, Mamoudou H. Dicko Prof.

Pr. Mamoudou H. DICKO, PhD

The maiden proposed research project should demonstrate that the present study will add a significant knowledge on the subject. The main objective of the literature research is to allow that the statement of the research need will clearly establish the objective of the new study.


Stage Independent Chloroquine Resistance And Chloroquine Toxicity Revealed Via Spinning Disk Confocal Microscopy, Bojana Gligorijevic, Kyle Purdy, David A. Elliott, Roland A. Cooper, Paul D. Roepe Apr 2008

Stage Independent Chloroquine Resistance And Chloroquine Toxicity Revealed Via Spinning Disk Confocal Microscopy, Bojana Gligorijevic, Kyle Purdy, David A. Elliott, Roland A. Cooper, Paul D. Roepe

Roland A. Cooper

We previously customized a Nipkow spinning disk confocal microscope (SDCM) to acquire 4D data for live, intraerythrocytic malarial parasites [Gligorijevic B, McAllister R, Urbach JS, Roepe, PD. Spinning disk confocal microscopy of live, intraerythrocytic malarial parasites. 1. Quantification of hemozoin development for drug sensitive versus resistant malaria. Biochemistry 2006;45:12400-10]. We reported that chloroquine (CQ) treatment did not appear to affect progress through the cell cycle, and suggested that toxicity may be manifested post-schizogony. We now use SDCM, synchronized cell culture and continuous vs. bolus drug dosing to investigate stage specific CQ effects in detail. We develop a novel, extremely rapid …


Presence Of A Polyadenylated Rna Fragment Encoding The Membrane Domain For Immunoglobulin Alpha Chain Indicates That Mrnas For Both Secreted And Membrane-Bound Alpha Chains Can Be Produced From The Same Rna Transcript, Janet Stavnezer Apr 2008

Presence Of A Polyadenylated Rna Fragment Encoding The Membrane Domain For Immunoglobulin Alpha Chain Indicates That Mrnas For Both Secreted And Membrane-Bound Alpha Chains Can Be Produced From The Same Rna Transcript, Janet Stavnezer

Janet M. Stavnezer

RNA blotting was employed to examine polyadenylated immunoglobulin alpha chain RNAs in a B lymphoma synthesizing membrane-bound and secretory IgA and in a hybridoma which synthesizes predominantly secretory IgA. Both cell lines were derived from the I.29 lymphoma and expressed the identical heavy chain variable region gene. In addition to the predicted mRNA precursors, four novel species of polyadenylated alpha RNAs were detected. The presence of a RNA species which was too large to have the same 3' end as the largest mRNA for membrane-bound alpha chain (alpha m) implied that transcription continued past the alpha m poly(A) site, and …


Isolation And Characterization Of Vibrio Tubiashii Outer Membrane Proteins And Determination Of A Toxr Homolog, Broderick Eribo Jan 2008

Isolation And Characterization Of Vibrio Tubiashii Outer Membrane Proteins And Determination Of A Toxr Homolog, Broderick Eribo

Broderick Eribo

Outer membrane proteins (OMPs) expressed by Vibrio tubiashii under different environmental growth conditions were characterized by sodium dodecyl sulfate-polyacrylamide gel electrophoresis, N-terminal amino acid sequencing, and PCR analyses. Results showed the presence of a 38- to 40-kDa OmpU-like protein and ompU gene, a maltoporin-like protein, several novel OMPs, and a regulatory toxR homolog.


Elucidation Of An Alternate Isoleucine Biosynthesis Pathway In Geobacter Sulfurreducens, Derek Lovley, Carla Risso, Stephen J. Van Dien, Amber Orloff, Maddalena V. Coppi Jan 2008

Elucidation Of An Alternate Isoleucine Biosynthesis Pathway In Geobacter Sulfurreducens, Derek Lovley, Carla Risso, Stephen J. Van Dien, Amber Orloff, Maddalena V. Coppi

Carla Risso

The central metabolic model for Geobacter sulfurreducens included a single pathway for the biosynthesis of isoleucine that was analogous to that of Escherichia coli, in which the isoleucine precursor 2-oxobutanoate is generated from threonine. 13C labeling studies performed in G. sulfurreducens indicated that this pathway accounted for a minor fraction of isoleucine biosynthesis and that the majority of isoleucine was instead derived from acetyl-coenzyme A and pyruvate, possibly via the citramalate pathway. Genes encoding citramalate synthase (GSU1798), which catalyzes the first dedicated step in the citramalate pathway, and threonine ammonia-lyase (GSU0486), which catalyzes the conversion of threonine to 2-oxobutanoate, were …


Temporal Evolution Of Methane Cycling And Phylogenetic Diversity Of Archaea In Sediments From A Deep-Sea Whale Fall In Monterey Canyon (Ca), Shana K. Goffredi, Regina Wilpiszeski, Ray Lee, Victoria J. Orphan Jan 2008

Temporal Evolution Of Methane Cycling And Phylogenetic Diversity Of Archaea In Sediments From A Deep-Sea Whale Fall In Monterey Canyon (Ca), Shana K. Goffredi, Regina Wilpiszeski, Ray Lee, Victoria J. Orphan

Shana Goffredi

Whale-falls represent localized areas of extreme organic enrichment in an otherwise oligotrophic deep-sea environment. Anaerobic remineralization within these habitats is typically portrayed as sulfidogenic; however, we demonstrate that these systems are also favorable for diverse methane-producing archaeal assemblages, representing up to 40% of total cell counts. Chemical analyses revealed elevated methane and depleted sulfate concentrations in sediments under the whale-fall, as compared to surrounding sediments. Carbon was enriched (up to 3.5%) in whale-fall sediments, as well as the surrounding sea floor to at least 10 m, forming a ‘bulls eye’ of elevated carbon. The diversity of sedimentary archaea associated with …


Probiotics: 100 Years (1907-2007) After Elie Metchnikoff's Observations, Kingsley Anukam, Gregor Reid Jan 2008

Probiotics: 100 Years (1907-2007) After Elie Metchnikoff's Observations, Kingsley Anukam, Gregor Reid

Kingsley C Anukam

No abstract provided.


Microbiology Laboratory Manual, Lee Lee, Tin-Chun Chu Dec 2007

Microbiology Laboratory Manual, Lee Lee, Tin-Chun Chu

Tin-Chun Chu, Ph.D.

No abstract provided.


Gene Expression Reveals Unique Skeletal Patterning In The Limb Of The Direct-Developing Frog, Eleutherodactylus Coqui, Ryan Kerney, James Hanken Dec 2007

Gene Expression Reveals Unique Skeletal Patterning In The Limb Of The Direct-Developing Frog, Eleutherodactylus Coqui, Ryan Kerney, James Hanken

Ryan Kerney

The growing field of skeletal developmental biology provides new molecular markers for the cellular pre- cursors of cartilage and bone. These markers enable resolution of early features of skeletal development that are otherwise undetectable through conventional staining tech- niques. This study investigates mRNA distributions of skeletal regulators runx2 and sox9 along with the cartilage-dominant collagen 2a1 (col2a1) in embryonic limbs of the direct- developing anuran, Eleutherodactylus coqui. To date, distri- butions of these genes in the limb have only been examined in studies of the two primary amniote models, mouse and chicken. In E. coqui, expression of transcription factors runx2 …


Appendices 1 And 2, Kathy Gillen Dec 2007

Appendices 1 And 2, Kathy Gillen

Kathy M. Gillen

No abstract provided.


Identifying The Fundamental Units Of Bacterial Diversity: A Paradigm Shift To Incorporate Ecology Into Bacterial Systematics, A. F. Koeppel, E. B. Perry, J. Sikorski, A. Warner, D. M. Ward, A. P. Rooney, E. Brambilla, N. Connor, E. Nevo, R. M. Ratcliff, Frederick M. Cohan Dec 2007

Identifying The Fundamental Units Of Bacterial Diversity: A Paradigm Shift To Incorporate Ecology Into Bacterial Systematics, A. F. Koeppel, E. B. Perry, J. Sikorski, A. Warner, D. M. Ward, A. P. Rooney, E. Brambilla, N. Connor, E. Nevo, R. M. Ratcliff, Frederick M. Cohan

Frederick M. Cohan

No abstract provided.


Development Of Methods For The Genetic Manipulation Of Flavobacterium Columnare, David R. Nelson Dec 2007

Development Of Methods For The Genetic Manipulation Of Flavobacterium Columnare, David R. Nelson

David R. Nelson

Background: Flavobacterium columnare is the causative agent of columnaris disease, a disease affecting many freshwater fish species. Methods for the genetic manipulation for some of the species within the Bacteroidetes, including members of the genus Flavobacterium, have been described, but these methods were not adapted to work with F. columnare. Results: As a first step toward developing a robust set of genetic tools for F. columnare, a protocol was developed to introduce the E. coli – Flavobacterium shuttle vector pCP29 into F. columnare strain C#2 by conjugal mating at an efficiency of 1.5 × 10-3 antibiotic-resistant transconjugants per recipient cell. …


Effect Of Two Milling Techniques And Flours Particle Size On Some, Theodore N'Dede Djeni Dec 2007

Effect Of Two Milling Techniques And Flours Particle Size On Some, Theodore N'Dede Djeni

Theodore N'Dede Djeni

Two techniques of milling (milling with wooden mortar and milling with hammer grinder) for the production of millet flours were compared in term of physical, biochemical and nutritional aspects and digestibility of the produced flours. A batch of millet grains with candle (Pennisetum glaucum L. R.BR) was purchased from a local market for flour production, while the flour digestibility tests were achieved with an enzymatic crude extract get from gastric juice of and snails (Archachatina marginata). The different rough flours obtained from both milling techniques showed significant differences (p<0.05) in their granulometric profiles and their biochemical composition. The mortar …


Impact Of An External Energy On Yersinia Enterocolitica [Atcc –23715] In Relation To Antibiotic Susceptibility And Biochemical Reactions: An Experimental Study, Mahendra Kumar Trivedi, Shrikant Patil Dec 2007

Impact Of An External Energy On Yersinia Enterocolitica [Atcc –23715] In Relation To Antibiotic Susceptibility And Biochemical Reactions: An Experimental Study, Mahendra Kumar Trivedi, Shrikant Patil

Mahendra Kumar Trivedi

Background :
While spiritual and mental energies are known to man, their impact has never been scientifically measurable in the material world and they remain outside the domain of science. The present experiments on Yersinia enterocolitica [ATCC –23715], report the effects of such energy transmitted through a person, Mr. Mahendrakumar Trivedi, which has produced an impact measurable in scientifically rigorous manner.

Methods:
Yersinia enterocolitica strains in revived and lyophilized state were subjected to spiritual energy transmitted through thought intervention and/or physical touch of Mr. Trivedi to the sealed tubes containing strain and were analyzed within 10 days after incubation. …