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Full-Text Articles in Life Sciences

Regional Body Composition In College-Aged Caucasians From Anthropometric Measures, Robert T. Davidson, Cameron B. Ritchie Dec 2007

Regional Body Composition In College-Aged Caucasians From Anthropometric Measures, Robert T. Davidson, Cameron B. Ritchie

Faculty Publications

Quantitating fat and lean tissue in isolated body regions may be helpful or required in obesity and health-outcomes research. However, current methods of regional body composition measurement require specialized, expensive equipment such as that used in computed tomography or dual energy x-ray absorptiometry (DEXA). Simple body size or circumference measurement relationships to body composition have been developed but are limited to whole-body applications. We investigated relationships between body size measurements and regional body composition. Methods Using DEXA technology we determined the fat and lean tissue composition for six regions of the body in predominantly Caucasian, college-aged men (n = 32) …


Comparison Of A Low Carbohydrate And Low Fat Diet For Weight Maintenance In Overweight Or Obese Adults Enrolled In A Clinical Weight Management Program, James D. Lecheminant, Cheryl A. Gibson, Debra K. Sullivan, Sandra Hall, Rik Washburn, Mary C. Vernon, Chelsea Curry, Elizabeth Stewart, Eric C. Westman, Joseph E. Donnelly Nov 2007

Comparison Of A Low Carbohydrate And Low Fat Diet For Weight Maintenance In Overweight Or Obese Adults Enrolled In A Clinical Weight Management Program, James D. Lecheminant, Cheryl A. Gibson, Debra K. Sullivan, Sandra Hall, Rik Washburn, Mary C. Vernon, Chelsea Curry, Elizabeth Stewart, Eric C. Westman, Joseph E. Donnelly

Faculty Publications

Background: Recent evidence suggests that a low carbohydrate (LC) diet may be equally or more effective for short-term weight loss than a traditional low fat (LF) diet; however, less is known about how they compare for weight maintenance. The purpose of this study was to compare body weight (BW) for participants in a clinical weight management program, consuming a LC or LF weight maintenance diet for 6 months following weight loss. Methods: Fifty-five (29 low carbohydrate diet; 26 low fat diet) overweight/obese middle-aged adults completed a 9 month weight management program that included instruction for behavior, physical activity (PA), and …


Effects Of Placement, Attachment, And Weight Classification On Pedometer Accuracy, Susan V. Graser, William J. Vincent, Robert P. Pangrazi Oct 2007

Effects Of Placement, Attachment, And Weight Classification On Pedometer Accuracy, Susan V. Graser, William J. Vincent, Robert P. Pangrazi

Faculty Publications

The purpose was to determine if waist placement of the pedometer affected accuracy in normal, overweight, and obese children, when attaching the pedometer to the waistband or a belt. Methods: Seventy-seven children (ages 10-12 years) wore 5 pedometers on the waistband of their pants and a belt at the following placements: navel (NV), anterior midline of the right thigh (AMT), right side (RS), posterior midline of the right thigh (PMT), and middle of the back (MB). Participants walked 100 steps on a treadmill at 80 m · min–1. Results: The RS, PMT, and MB sites on the waistband and the …


Byu Adds "Zing" To New Carbonated Yogurt Product In Stores Nationwide, Byu News Sep 2007

Byu Adds "Zing" To New Carbonated Yogurt Product In Stores Nationwide, Byu News

Faculty Publications

A BYU professor invented the "zing" in General Mills' new carbonated yogurt product, now available in stores all over the country. Fizzix(TM), an extension of Yoplait's Go-GURT brand that comes in a tube, adds a tangy tingle to the traditional fruity flavor of yogurt that will "fizzify" the tongues of the 8- to 12-year-olds the company is targeting.


Novel Perturbation Approach For The Structure Factor Of The Attractive Hard-Core Yukawa Fluid, Andrij Trokhymchuk, Roman Melnyk, Filip Moucka, Ivo Nezbeda Sep 2007

Novel Perturbation Approach For The Structure Factor Of The Attractive Hard-Core Yukawa Fluid, Andrij Trokhymchuk, Roman Melnyk, Filip Moucka, Ivo Nezbeda

Faculty Publications

A novel perturbation approach for the structure factor S(k) of the Lennard-Jones-type Yukawa fluid with z=1.8 is presented. An approach is based on a new reference system, that is, the short-range Yukawa model with z0 > z=1.8. By choosing for the reference system the value z0=6, it is shown that (i) the proposed approach for S(k) performs much better than the traditional hard-sphere reference perturbation method does; (ii) the use of an approximate mean spherical (MSA) description of the reference structure factor provides the results for S(k) that are more accurate as those obtained from the direct MSA computations; and (iii) …


Differential Resource Allocation In Deer Mice Exposed To Sin Nombre Virus, Eric Wilson, Erin M. Lehmer, Christine A. Clay, Stephen St. Jeor, Denise M. Dearing Sep 2007

Differential Resource Allocation In Deer Mice Exposed To Sin Nombre Virus, Eric Wilson, Erin M. Lehmer, Christine A. Clay, Stephen St. Jeor, Denise M. Dearing

Faculty Publications

The resource allocation hypothesis predicts that reproductive activity suppresses immunocompetence; however, this has never been tested in an endemic disease system with free-ranging mammals. We tested the resource allocation hypothesis in wild deer mice (Peromyscus maniculatus) with natural exposure to Sin Nombre Virus (SNV). Immunocompetence was estimated from the extent of swelling elicited after deer mice were injected with phytohemagglutinin (PHA); swelling is positively correlated with immunocompetence. After livetrapping deer mice, we determined their reproductive state and SNV infection status. Males were more likely to be seropositive for SNV than females (37% vs. 25%) and exhibited 10% less swelling after …


Assessment Of Genetic Diversity In The Usda And Cip-Fao International Nursery Collections Of Quinoa (Chenopodium Quinoa Willd.) Using Microsatellite Markers, S. A. Christensen, D. B. Pratt, C. Pratt, P. T. Nelson, M. R. Stevens, Eric N. Jellen, Craig E. Coleman, Daniel J. Fairbanks, A. Bonifacio, Michael J. Maughan Aug 2007

Assessment Of Genetic Diversity In The Usda And Cip-Fao International Nursery Collections Of Quinoa (Chenopodium Quinoa Willd.) Using Microsatellite Markers, S. A. Christensen, D. B. Pratt, C. Pratt, P. T. Nelson, M. R. Stevens, Eric N. Jellen, Craig E. Coleman, Daniel J. Fairbanks, A. Bonifacio, Michael J. Maughan

Faculty Publications

Quinoa (Chenopodium quinoa Willd.) is a staple food crop for millions of impoverished rural inhabitants of Andean South America where it has been cultivated for millennia. Interest in quinoa, due largely to its superior nutritional characteristics, is fuelling a growing export market and has led to an increased focus on genetic research and the development of quinoa breeding programmes throughout South America. The success of these breeding programmes will rely heavily on the development of core germplasm collections and germplasm conservation. We report the development of a set of fluorescence-tagged microsatellite molecular markers that can be used to characterize genetic …


Quality Of Hermetically Packaged Split Peas During Long-Term Storage, J. S. Chapman, Laura K. Jefferies, Oscar A. Pike Jul 2007

Quality Of Hermetically Packaged Split Peas During Long-Term Storage, J. S. Chapman, Laura K. Jefferies, Oscar A. Pike

Faculty Publications

There is a market for low moisture foods that can be stored for long periods of time for use in disaster relief and other emergency situations. Split peas hermetically sealed in cans with a reduced oxygen atmosphere are available in the retail market, but the effect of long-term storage on the quality of the product is unknown. Ten samples of split peas representing 5 retail brands packaged in size No.10 cans and stored at room temperature were obtained from donors. Two fresh samples of split peas were purchased as controls. Samples ranged in age from <1 to 34 years. Can headspace oxygen, can seam integrity, and split pea water activity and color were evaluated. A 52-member consumer panel evaluated the samples, prepared as split pea soup, for appearance, aroma, texture, flavor, and overall acceptability using a 9-point hedonic scale. Acceptance for use in everyday and emergency situations was also determined. Can headspace oxygen ranged from 0.19 to 20.1%. All can seams were determined to be satisfactory. Water activity of the raw split peas ranged from 0.41 to 0.56. The green color of raw split peas decreased over time as shown by increasing CIE a* values. Flavor, appearance, texture, and overall acceptability hedonic scores ranged from 6.7 to 4.4 and decreased over time. Hedonic scores for appearance were correlated with the decrease in raw product green color (r2 = .928). Hedonic scores for texture declined over time, corresponding with increasing hardness of the peas. All samples had an acceptance in an emergency situation of over 75%. Results indicate split pea quality declines over time, but the product maintains sufficient sensory acceptance to be considered for use in applications requiring long-term storage.


Quality Of Hermetically Packaged Dehydrated Carrots During Long-Term Storage, S. R. Bartholomew, Laura K. Jefferies, Oscar A. Pike Jul 2007

Quality Of Hermetically Packaged Dehydrated Carrots During Long-Term Storage, S. R. Bartholomew, Laura K. Jefferies, Oscar A. Pike

Faculty Publications

There is interest in the long-term storage of food for applications such as space flight, disaster relief, and personal preparedness. Dehydrated carrots packaged in hermetically sealed cans with a reduced oxygen atmosphere are available in the retail market. The quality of dehydrated carrots stored up to two years has been reported, but the effect of longer-term storage on the quality of the product is unknown. Eleven samples of dehydrated carrots representing 6 brands, packaged in size No.10 cans and stored at room temperature, were obtained from donors. Two fresh samples were purchased as controls. Samples ranged in age from < 1 to 34 years. Can headspace oxygen, can seam integrity, and dehydrated carrot water activity and color were evaluated. Samples were rehydrated for 20 minutes in filtered water that was brought to a boil. A 56-member consumer panel evaluated the rehydrated carrots for appearance, aroma, texture, flavor, and overall acceptability using a 9-point hedonic scale. Acceptance for use in everyday and emergency situations was also determined. Can headspace oxygen ranged from < 0.01% to 14.7%. All can seams were determined to be satisfactory. Water activity of the dehydrated carrots ranged from 0.31 to 0.38. L*, a* and b* values ranged from 37.8 to 44.0, 17.1 to 30.2 and 23.0 to 37.3, respectively. The orange color of most samples faded during storage. Hedonic scores for overall acceptability of dehydrated carrots declined from 7.1 to 3.4. All samples had an acceptance for use in an emergency situation of over 70%. Results indicate that dehydrated carrots decline in quality during long-term storage but retain sufficient sensory acceptance to be considered for use in long-term storage regimens.


Distinguishing Importation From Diversification Of Quinolone-Resistant Neisseria Gonorrhoeae By Molecular Evolutionary Analysis, Keith A. Crandall, Marcos Perez-Losada, Margaret C. Bash, Michael Dan, Jonathan Zenilman, Raphael P. Viscidi Jun 2007

Distinguishing Importation From Diversification Of Quinolone-Resistant Neisseria Gonorrhoeae By Molecular Evolutionary Analysis, Keith A. Crandall, Marcos Perez-Losada, Margaret C. Bash, Michael Dan, Jonathan Zenilman, Raphael P. Viscidi

Faculty Publications

Distinguishing the recent introduction of quinolone resistant gonococci into a population from diversification of resistant strains already in the population is important for planning effective infection control strategies. We applied molecular evolutionary analyses to DNA sequences from 9 housekeeping genes and gyrA, parC and porB of 24 quinolone resistant N. gonorrhoeae (QRNG) and 24 quinolone sensitive isolates collected in Israel during 2000-2001. Results- Phylogenetic and eBURST analyses and estimates of divergence time indicated QRNG were introduced on 3 separate occasions and underwent limited diversification by mutation, deletion and horizontal gene transfer. Reconstruction of N. gonorrhoeae demography showed a slowly declining …


Inhibitory Effects Of Estrogen Receptor Beta On Specific Hormone-Responsive Gene Expression And Association With Disease Outcome In Primary Breast Cancer, Chin-Yo Lin, Anders Strom, Li Say Kong, Silke Kietz, Jane S. Thomsen, Jason B. S. Tee, Vinsensius B. Vega, Lance D. Miller, Johanna Smeds, Jonas Bergh, Jan-Ake Gustafsson, Edison T. Liu Apr 2007

Inhibitory Effects Of Estrogen Receptor Beta On Specific Hormone-Responsive Gene Expression And Association With Disease Outcome In Primary Breast Cancer, Chin-Yo Lin, Anders Strom, Li Say Kong, Silke Kietz, Jane S. Thomsen, Jason B. S. Tee, Vinsensius B. Vega, Lance D. Miller, Johanna Smeds, Jonas Bergh, Jan-Ake Gustafsson, Edison T. Liu

Faculty Publications

The impact of interactions between the two estrogen receptor (ER) subtypes, ER(alpha) and ER(beta), on gene expression in breast cancer biology is not clear. The goal of this study was to examine transcriptomic alterations in cancer cells co-expressing both receptors and the association of gene expression signatures with disease outcome. Methods: Transcriptional effects of ER(beta) overexpression were determined in a stably transfected cell line derived from ER(alpha) -positive T-47D cells. Microarray analysis was carried out to identify differential gene expression in the cell line, and expression of key genes was validated by quantitative polymerase chain reaction. Microarray and clinical data …


Tandem Repeat Regions Within The Burkholderia Pseudomallei Genome And Their Application For High Resolution Genotyping, Richard A. Robison, Jana M. U'Ren, James M. Schupp, Talima Pearson, Heidie Hornstra, Christine L. Friedman Clark, Kimothy L. Smith, Rebecca R. Leadem Daugherty, Shane D. Rhoton, Ben Leadem, Shalamar Georgia, Michelle Cardon, Lynn Y. Huynh, David Deshazer, Steven P. Harvey, Daniel Gal, Mark J. Mayo, David Wagner, Bart J. Currie, Paul Keim Mar 2007

Tandem Repeat Regions Within The Burkholderia Pseudomallei Genome And Their Application For High Resolution Genotyping, Richard A. Robison, Jana M. U'Ren, James M. Schupp, Talima Pearson, Heidie Hornstra, Christine L. Friedman Clark, Kimothy L. Smith, Rebecca R. Leadem Daugherty, Shane D. Rhoton, Ben Leadem, Shalamar Georgia, Michelle Cardon, Lynn Y. Huynh, David Deshazer, Steven P. Harvey, Daniel Gal, Mark J. Mayo, David Wagner, Bart J. Currie, Paul Keim

Faculty Publications

The facultative, intracellular bacterium Burkholderia pseudomalle is the causative agent of melioidosis, a serious infectious disease of humans and animals. We identified and categorized tandem repeat arrays and their distribution throughout the genome of B. pseudomallei strain K96243 in order to develop a genetic typing method for B. pseudomallei. We then screened 104 of the potentially polymorphic loci across a diverse panel of 31 isolates including B. pseudomallei, B. mallei and B. thailandensis in order to identify loci with varying degrees of polymorphism. A subset of these tandem repeat arrays were subsequently developed into a multiple-locus VNTR analysis to examine …


Spotted Cotton Oligonucleotide Microarrays For Gene Expression Analysis, Joshua Udall, Lex E. Flagel, Foo Chung, Andrew W. Woodward, Ran Hovav, Ryan A. Rapp, Jordan M. Swanson, Jinsuk J. Lee, Alan R. Gingle, Dan Nettleton, Christopher D. Town, Z. Jeffrey Chen, Jonathan F. Wendel Mar 2007

Spotted Cotton Oligonucleotide Microarrays For Gene Expression Analysis, Joshua Udall, Lex E. Flagel, Foo Chung, Andrew W. Woodward, Ran Hovav, Ryan A. Rapp, Jordan M. Swanson, Jinsuk J. Lee, Alan R. Gingle, Dan Nettleton, Christopher D. Town, Z. Jeffrey Chen, Jonathan F. Wendel

Faculty Publications

Microarrays offer a powerful tool for diverse applications plant biology and crop improvement. Recently, two comprehensive assemblies of cotton ESTs were constructed based on three Gossypium species. Using these assemblies as templates, we describe the design and creation and of a publicly available oligonucleotide array for cotton, useful for all four of the cultivated species. Results: Synthetic oligonucleotide probes were generated from exemplar sequences of a global assembly of 211,397 cotton ESTs derived from <50 different cDNA libraries representing many different tissue types and tissue treatments. A total of 22,787 oligonucleotide probes are included on the arrays, optimized to target the diversity of the transcriptome and previously studied cotton genes, transcription factors, and genes with homology to Arabidopsis. A small portion of the oligonucleotides target unidentified protein coding sequences, thereby providing an element of gene discovery. Because many oligonucleotides were based on ESTs from fiber-specific cDNA libraries, the microarray has direct application for analysis of the fiber transcriptome. To illustrate the utility of the microarray, we hybridized labeled bud and leaf cDNAs from G. hirsutum and demonstrate technical consistency of results. Conclusion: The cotton oligonucleotide microarray provides a reproducible platform for transcription profiling in cotton, and is made publicly available through http://cottonevolution.info.


The Niemann-Pick Type C2 Protein Loads Isoglobotrihexosylceramide Onto Cd1d Molecules And Contributes To The Thymic Selection Of Nkt Cells, Paul B. Savage, Nicolas Schrantz, Yuval Sagiv, Yang Liu, Albert Bendelac, Luc Teyton Mar 2007

The Niemann-Pick Type C2 Protein Loads Isoglobotrihexosylceramide Onto Cd1d Molecules And Contributes To The Thymic Selection Of Nkt Cells, Paul B. Savage, Nicolas Schrantz, Yuval Sagiv, Yang Liu, Albert Bendelac, Luc Teyton

Faculty Publications

The Niemann-Pick type C2 (NPC2) protein is a small, soluble, lysosomal protein important for cholesterol and sphingolipid transport in the lysosome. The immunological phenotype of NPC2-deficient mice was limited to an impaired thymic selection of Valpha 14 natural killer T cells (NKT cells) and a subsequent reduction of NKT cells in the periphery. The remaining NKT cells failed to produce measurable quantities of interferon-gamma in vivo and in vitro after activation with alpha-galactosylceramide. In addition, thymocytes and splenocytes from NPC2-deficient mice were poor presenters of endogenous and exogenous lipids to CD1d-restricted Valpha 14 hybridoma cells. Importantly, we determined that similar …


Avpv Neurons Containing Estrogen Receptor-Beta In Adult Male Rats Are Influenced By Soy Isoflavones, Edwin D. Lephart, Lihong H. Bu Feb 2007

Avpv Neurons Containing Estrogen Receptor-Beta In Adult Male Rats Are Influenced By Soy Isoflavones, Edwin D. Lephart, Lihong H. Bu

Faculty Publications

Background Isoflavones, the most abundant phytoestrogens in soy foods, are structurally similar to 17beta-estradiol. It is known that 17beta-estradiol induces apoptosis in anteroventral periventricular nucleus (AVPV) in rat brain. Also, there is evidence that consumption of soy isoflavones reduces the volume of AVPV in male rats. Therefore, in this study, we examined the influence of dietary soy isoflavones on apoptosis in AVPV of 150 day-old male rats fed either a soy isoflavone-free diet (Phyto-free) or a soy isoflavone-rich diet (Phyto-600). Results: The occurrence of apoptosis in AVPV was examined by TUNEL staining. The incidence of apoptosis was about 10 times …


Genetic Diversity And Low Reproductive Success In Isolated Populations Of Utah Juniper (Juniperus Osteosperma, Cupressaceae), Loreen Allphin, Val J. Anderson, Amy F. Hunt Jan 2007

Genetic Diversity And Low Reproductive Success In Isolated Populations Of Utah Juniper (Juniperus Osteosperma, Cupressaceae), Loreen Allphin, Val J. Anderson, Amy F. Hunt

Faculty Publications

Utah juniper (Juniperus osteosperma) has greatly expanded its historical range in the western United States. Management plans for the species have focused on curtailing its encroachment into sagebrush and grassland communities. These plans often include burning or other methods of elimination. These methods may result in subdivision or fragmentation of existing juniper stands. We initiated a study at Dugway Proving Ground, a U.S. Army facility, to examine the effects of fragmentation on the reproductive success of Utah juniper in isolated populations. We used enzyme electrophoresis to quantify genetic variability in isolated populations. We also determined population reproductive success by examining …


Threatened Fishes Of The World: Percilia Irwini (Eigenmann 1927) (Perciliidae), Evelyn Habit, Mark C. Belk Jan 2007

Threatened Fishes Of The World: Percilia Irwini (Eigenmann 1927) (Perciliidae), Evelyn Habit, Mark C. Belk

Faculty Publications

Common name: Carmelita de Concepcion (Spanish).


Biological Status Of Leatherside Chub: A Framework For Conservation Of Western Freshwater Fishes, Mark C. Belk, Jerald B. Johnson Jan 2007

Biological Status Of Leatherside Chub: A Framework For Conservation Of Western Freshwater Fishes, Mark C. Belk, Jerald B. Johnson

Faculty Publications

Outside of anadromous salmonids and a few endangered species, biology of native freshwater fishes of western North America is poorly known. What do we need to know to effectively manage native species and avoid decline and extinction? A recent analysis of the role of science in the Pacific salmon controversy outlines a clear framework for biological evaluation and management of native species. This framework has three components: (1) determine status of populations based on genetic and ecological variation, (2) identify and quantify threats to populations, and (3) determine actions to alleviate threats and promote conservation of populations. We use our …


Solar Dryer Construction And Use Manual Version 2.0 2007, Jonathan P. Rowe, Jonathan K. Russon, Frost M. Steele Jan 2007

Solar Dryer Construction And Use Manual Version 2.0 2007, Jonathan P. Rowe, Jonathan K. Russon, Frost M. Steele

Faculty Publications

In less time than it took to develop this solar dryer and manual, the Pacific Island area has experienced several typhoons and tropical depressions followed by significant flooding and destruction of homes, properties and crops. It is in the interest of all people to become more self-reliant in times of need and to have the basic necessities available at a moment’s notice to sustain life until transportation, commerce, health care, agriculture, water, etc. can be restored to a more normal state. This work was done to enable the people of the Pacific islands to meet some of their food requirements …


Acute Stretch Perception Alteration Contributes To The Success Of The Pnf "Contract-Relax" Stretch, J. Brent Feland, Sterling C. Hilton, J. Ty Hopkins, Iain Hunter, Ulrike H. Mitchell, J. William Myrer Jan 2007

Acute Stretch Perception Alteration Contributes To The Success Of The Pnf "Contract-Relax" Stretch, J. Brent Feland, Sterling C. Hilton, J. Ty Hopkins, Iain Hunter, Ulrike H. Mitchell, J. William Myrer

Faculty Publications

Context: Some researchers have suggested that an alteration of stretch perception could be responsible for the success of the contract-relax (CR) stretch, a stretch technique derived from proprioceptive neuromuscular facilitation (PNF). Objective: This study was conducted to determine if the alteration of the stretch perception is a possible explanation for the range of motion (ROM) gains of the CR stretch. Participants: Eighteen subjects performed two stretches in randomized order: the slow stretch and the CR stretch. Main Outcome Measure: The stretch intensity was controlled. The stretch force was measured and compared between the slow stretch and CR stretch. Results: There …