Life Sciences Commons^™

The Influence Of Polystyrene Microplastics On Juvenile Steelhead Trout (Oncorhynchus Mykiss), Kaitlyn Marie Baker

Dissertations and Theses

Mass production of plastic within the past decade has led to over 100 billion tons of plastics being added to the world’s oceans through rivers and effluent disposal and decomposition. For marine environments, the sudden and constant growth of microplastics (plastics 1 µm to 5 mm in diameter), is of particular concern to top-predatory fish such as steelhead trout (Oncorhynchus mykiss), who passively or actively uptake microplastics while consuming prey. Previous research has demonstrated clear detrimental impacts of microplastic accumulation in bivalves, seabirds, and zebrafish, including decreased diet, reproduction rates, and metabolism, as well as increased rates of …

Drivers And Dynamics Of Phytoplankton Communities And Harmful Algal Blooms In Mountain Lakes, Lara Stephanie Jansen

Dissertations and Theses

Harmful cyanobacterial blooms (cyanoHABs) are a complex and widespread disturbance in freshwater water bodies, impacting water quality for wildlife and human populations. While cyanobacteria often bloom in warm lakes impacted by human development like agriculture, blooms are increasingly reported in cooler waters with limited development in the surrounding watershed. As much of cyanoHAB research has focused on lakes in highly developed watersheds, the understanding of factors leading to cyanobacteria dominance and blooms in the absence of major development remains limited. Mountain lakes can serve as ideal systems to study bloom-forming cyanobacteria in watersheds with minimal development. In addition, mountain lakes …

Orthotrichum Lyellii As An Active Moss Biomonitor: Examining The Interplay Between Ambient Pm10, Bulk Deposition And Heavy Metals In An Urban Environment, Scott Bradley Kiel

Dissertations and Theses

The importance of monitoring and preventing pollution in the environment is a globally recognized issue. Of the criteria pollutants outlined by the United States Environmental Protection Agency, particulate matter is among these least understood in relation to toxicity and most wide-spread. Many governments have employed continuous air quality monitoring networks to track ambient levels of particulate matter, but are often too widespread to capture the heterogeneity of the urban environment, especially for heavy metal deposition. In Portland, OR, the epiphytic moss Orthotrichum lyellii was successfully used as a low-cost passive biomonitor to increase the spatial resolution of pollution around the …

Effects Of Green Crab (Carcinus Maenas) Across Variable Densities Of Eelgrass (Zostera Marina), Kimberly Alexis Brown

Dissertations and Theses

Eelgrass (Zostera marina) plays a critical role in estuarine ecosystem function by sustaining a variety of marine and freshwater species, but it's increasingly threatened by the aggressive non-native green crab (Carcinus maenas). The abundance of C. maenas is on the rise within the coastal environment of Oregon and it is imperative to know how these populations will affect the long-term health of Z. marina. C. maenas have been linked to declines in Z. marina coverage and shellfish abundance, but there has been no research on to what extent the density of Z. marina affects its …

The New Shiny Penny? Regenerative Agriculture Beliefs And Practices Among Portland's Urban Agriculturalists, Melia Ann Chase

Dissertations and Theses

Regenerative agriculture (RA) is a set of farming and land management practices intended to support or enhance soil health and carbon sequestration potential of soils while producing food, fiber, or other agricultural products. It has received broad acclaim from scholars, corporations, and governmental bodies as a potential means of sequestering carbon and mitigating climate change impacts. It has also received critique and pushback for its vague definition, shifting metrics, and lack of acknowledgement of the Indigenous practices underlying the modern suite of regenerative practices. The purpose of this research is to investigate the beliefs Portland, Oregon urban agricultural practitioners hold …

Ecological Changes Of The Lower Niobrara River Valley And Lewis And Clark Lake Delta From Past To Present, Madalyn Christine Bollig

Dissertations and Theses

Over half of the world’s large river systems are impacted by dams. These may prevent sediment flow downstream, resulting in accumulation in the upstream reservoir. On the Missouri River, deltas and associated backwater-affected areas occur in nine locations across six reservoirs. One of these, the Lewis and Clark Lake delta-backwater, is influenced by sediment inputs from both the Missouri River and the Niobrara River. While the extension of the prograding delta into the reservoir has been well documented, there has been little research on upstream (backwater) effects of the delta on the lower Niobrara River. This study examined ecological changes …

Exploring Linkages Between Landscape Patterns And Freshwater And Estuarine Bivalves In The Coast Range Of Oregon, Kaegan Michael Scully-Engelmeyer

Dissertations and Theses

Spatial configurations of landscape variables (biotic, abiotic, and socio-ecological) affect and are affected by ecological processes and species in watersheds. This dissertation explores relationships among landscape patterns, ecosystem processes and bivalve species dynamics in coastal watersheds in Oregon, USA. I approached this broad topic through two primary avenues of research: investigating cross-ecosystem threats from pesticide use in forestland management to downstream aquatic environments, and the landscape ecology of an at-risk freshwater mussel species.

Terrestrial land use activities present cross-ecosystem threats to riverine and marine species and processes. Specifically, pesticide runoff can disrupt hormonal, reproductive, and developmental processes in aquatic organisms, …

Long Term Nutrient And Chlorophyll A Dynamics Across Long Island Sound And Impacts On Dissolved Oxygen Conditions Within The Western Sound (1991-2019), Sherry Perreira

Dissertations and Theses

Nitrogen overload, eutrophication, and hypoxia have been challenging and persistent water quality problems in Long Island Sound (LIS) over the past decades with major impacts on commercial industries, ecology, and recreational activities in the region. Recognizing these problems, the EPA enforced three phases of the Clean Water Act (CWA) to reduce nitrogen loads in an effort to improve this important estuary. This study examines how nitrogen (NH₃, NO_x & TDN), chlorophyll a (CHLA), and dissolved oxygen (DO) concentrations changed in LIS over the past 30 years, in response to water quality regulations as well as changes in …

Pharmaceuticals And Personal Care Products In Pacific Northwest Coastal Ecosystems: Spatial Variation, Organism Effects, And Consumer Perspectives, Amy Lynne Ehrhart

Dissertations and Theses

Anthropogenic pollution poses a threat to marine organisms and ecosystems worldwide. Common chemical pollutants that enter the marine environment include legacy contaminants, which are well known and heavily regulated or banned pollutants, and emerging contaminants, which are more recently recognized as pollutants and often lack regulatory limits for their use and discharge. Wastewater treatment plant (WWTP) effluent is a major source of various contaminants of concern, particularly pharmaceutical and personal care products (PPCPs) that are not fully removed during treatment. PPCPs exist at low concentrations in the environment and may have unknown and subtle effects on marine life. Data gaps …

Investigating Dose-Dependent, Multi-Generational, And Strain-Specific Effects Of 17Α-Ethynylestradiol Exposure In Zebrafish (Danio Rerio), Decatur Mitochondria Foster

Dissertations and Theses

Endocrine disrupting chemicals (EDCs) pose a threat to biodiversity at the individual, population, and ecosystem level, as they can interfere with processes that are responsible for regulating metabolism, development, behavior, and reproduction in living organisms. 17α-ethynylestradiol (EE2) is a synthetic estrogen and EDC utilized in pharmaceutical and livestock industries, and contaminates waterways worldwide. This research explores the effects of dose-dependent and multi-generational exposure of EE2 in three strains of zebrafish. High dose (10-25 ng/L EE2) exposure led to complete reproductive failure, as well as significantly decreased survival and growth. A period in clean water (depuration) after exposure allowed for some …

Understanding Institutional, Social, And Ecological Systems Influencing Climate Change Adaptation And Water Governance In Wine Regions: A Comparative Case Study Of Oregon's Willamette Valley, Usa And Tasmania, Australia, Erin Upton

Dissertations and Theses

My research examines how water management decisions create opportunities or barriers to climate change adaptation in wine regions. Water is a critical resource for economic and environmental sustainability in wine grape growing regions. Climate uncertainty presents considerable risk and vulnerability to freshwater resources in wine producing regions where needs for access to water will increase with more frequent climate extremes. Climate adaptation in the wine industry is a complex problem that requires multi-disciplinary approaches. This research aims to strengthen the interface between water governance and technological and viticulture adaptation approaches. Water resources are shared across regions by stakeholders with varied …

Before And After The Storm: Interactions Between Tree-Fall Canopy Gaps, Plant Phenology, And Frugivorous Lemurs In Masoala National Park, Madagascar, Monica Sue Mogilewsky

Dissertations and Theses

Madagascar is one of Earth's top biodiversity hotspots, with 80% of life on the island considered endemic. Among the endemic species are lemurs, a diverse group of non-human primates. Unfortunately, Madagascar's diversity, including lemurs, is threatened by habitat degradation and loss. Despite intense anthropogenic pressure over the past 50 years, scientists have not detected any lemur extinctions during this period. Some researchers have proposed that lemurs' adaptations to natural disturbances have provided these taxa resiliency against anthropogenic disturbances. Certainly, Madagascar experiences an extreme disturbance regime: the island experiences an average of over three cyclones a year. These cyclones create numerous, …

Ecosystem Health In Guánica Bay And La Parguera, Puerto Rico: Remote Sensing Of Ocean Color And Metal Analysis Of Coral Tissue And Surficial Sediments, Jahnelle Howe

Dissertations and Theses

Guánica Bay is an estuary located in southwest Puerto Rico, with a coral reef ecosystem at its periphery. This ecosystem is affected by sediments, nutrients, and contaminants from the watershed through the Bay and into the offshore water. This project evaluates Guánica Bay and La Parguera coastal areas through remote sensing and chemical analysis to assess coastal ecosystem health. The concentration of metals in two coral species and their associated surface sediments was were analyzed by X-ray fluorescence (XRF) and Direct Mercury Analyzer (DMA- 80). Ocean color remote sensing was used to estimate nutrient inputs and phytoplankton biomass through chlorophyll- …

The Fate Of Atmospherically Deposited Mercury In Mountain Lake Food Webs, And Implications For Fisheries Management, Ariana Martos Chiapella

Dissertations and Theses

Mountain lakes are an iconic feature of the landscape in the Mountain West. They hold significant ecological and cultural value, and are important sentinels of environmental change. Despite their pristine image, these remote waterbodies are subjected to numerous anthropogenic stressors. Mountain lakes are naturally fishless systems, but historical fish stocking has led to major changes in mountain lake food web structure, including declines of resident amphibians, large-bodied zooplankton, and emergent insect populations. Atmospherically deposited contaminants, such as mercury, can accumulate in mountain lake food webs, leading to relatively high levels in the fish relative to the water. Managing for these …

Ecology And Population Dynamics Of Salmonids In The Columbia River: Response Of Fishes To Anthropogenic Change In A Large Riverscape, Timothy Sean Elder

Dissertations and Theses

Freshwater ecosystems and the species that reside therein are disproportionately imperiled compared to terrestrial systems. Over the past 150 years, the Columbia River basin in the western United States has gone from one of the most productive and abundant salmon watersheds in the world, to having just a small fraction of its former salmon abundance. The cause of declines in salmon productivity and abundance are related to overlapping and confounding stressors including changes in large-scale climatic patterns and anthropogenic alterations within and adjacent to the Columbia River. Four main anthropogenic stressors have been identified as the leading causes of salmonid …

Mooring Impacts On Zostera Marina Meadows And Associated Epifauna In Nantucket Harbor, Massachusetts, Usa, Andrew Wright Mccandless

Dissertations and Theses

Seagrass ecosystems are some of the most productive in the world and provide a variety of ecosystem services but are facing global decline chiefly due to anthropogenic disturbance. Mechanical disturbances to seagrass meadows from anchoring, propeller scars, and mooring scars result in losses or damage to both shoots and the underlying rhizome. I conducted a literature synthesis on the extent of, recovery from, and ecological impacts of these mechanical disturbances to seagrass meadows. The literature suggests that anchoring damage tends to be worst in deeper water where larger vessels anchor and can cause large (>100m²) loss per …

Composition And Dispersal Dynamics Of Vegetation Communities In Urban Riparian Forests, Christa Von Behren

Dissertations and Theses

In urban riparian areas, vegetation composition may be affected by urban land use changes at both the stream reach and the watershed scale. Moreover, the mechanisms by which seeds disperse may be affected both by reduction in seed sources due to vegetation removal and by the urban stream syndrome that produces flashier hydrographs and incised channels. I hypothesized that vegetation communities with high cover of native and hydrophilic species would be found in watersheds with high forest cover, while more limited cover of these species would be found in highly developed watersheds. Additionally, to examine the dispersal mechanisms contributing to …

Food Waste Diversion Programming In Post-Secondary Education, Manar Arica Alattar

Dissertations and Theses

The urgent need for reform of USA and global food systems is evident in the pervasiveness of both food waste and food insecurity. Such an inefficient system strains the environmental, social, and economic systems on which it relies. Although policy and infrastructure changes are essential, consumers can play a significant role by decreasing their food waste, given that consumer waste represents 60% of the waste along the food cycle in developed countries. Incorporation of food literacy and food waste education in school curricula may provide a meaningful entry point for promoting food waste reduction skills.

This dissertation presents context on …

Assessing The Effects Of Climate Change And Fuel Treatments On Forest Dynamics And Wildfire In Dry Mixed-Conifer Forests Of The Inland West: Linking Landscape And Social Perspectives, Brooke Alyce Cassell

Dissertations and Theses

Over the past century in the western United States, warming has produced larger and more severe wildfires than previously recorded. General circulation models and their ensembles project continued increases in temperature and the proportion of precipitation falling as rain. Warmer and wetter conditions may change forest successional trajectories by modifying rates of vegetation establishment, competition, growth, reproduction, and mortality. Many questions remain regarding how these changes will occur across landscapes and how disturbances, such as wildfire, may interact with changes to climate and vegetation. Forest management is used to proactively modify forest structure and composition to improve fire resilience. Yet, …

Recovery Of Zooplankton Communities To Whole-Lake Disturbance, Brian Newton Mcgann

Dissertations and Theses

Community assembly following disturbance is a key process in determining the composition and function of the future community. However, replicated studies of community assembly at whole ecosystem scales are rare. Here is described a series of whole-lake experiments in which the recovery of zooplankton communities is tracked following an ecosystem-scale disturbance. Fourteen lakes in eastern Washington were chosen: seven lakes were treated with rotenone, while the remaining seven were reference. Each lake was monitored up to six months before and one to two years after the rotenone treatments. Zooplankton tows were taken monthly, at a shallow, intermediate, and deep site …

Assessing A Fluorescence Spectroscopy Method For In-Situ Microbial Drinking Water Quality, Taylor Jeffery Sharpe

Dissertations and Theses

Waterborne disease is a significant contributor to the global burden of disease, in particular among high-risk populations in developing nations. State-of-the-art methods for the enumeration of microbial pathogens in drinking water sources have important limitations, including high initial cost, 24-48 hour delays in results, high staffing and facility requirements, and training requirements which all become especially problematic in the developing nation context.

A number of alternative approaches to microbial water quality testing have been proposed, with the goal of decreasing the required testing time, decreasing overall costs, leveraging appropriate technology approaches, or improving sensitivity or specificity of the water quality …

Anthropogenic Effects On The Fouling Community: Impacts Of Biological Invasions And Anthropogenic Structures On Community Structure, Whitney Elizabeth Mcclees

Dissertations and Theses

Coastal anthropogenic infrastructure has significantly modified nearshore environments. Because these structures often have a strong association with shipping as would be found in ports and harbors, they have been identified as invasion hotspots. Due to propagule pressure from shipping and recreational boating and suitable uncolonized substrate that provides a refuge from native predators, a greater number of non-native species have been found on these structures compared to nearby natural substrate. The mechanisms that limit the spread of non-native species from anthropogenic structures to natural substrate have been explored for several taxa at a species-specific level, but less so from an …

Ecosystem Recovery In Estuarine Wetlands Of The Columbia River Estuary, Sarah Ann Kidd

Dissertations and Theses

In the restoration of tidal wetland ecosystems, potential drivers of plant community development range from biotic controls (e.g. plant competition, seed dispersal) to abiotic controls (e.g. tidal flooding, salinity levels). How these controls influence the success of tidal wetland restoration are only partly understood, but have important implications for wetland habitat recovery. Specifically, the extent to which the existing native and non-native seed banks in tidally reconnected wetlands interact with these controls is not clear, yet the potential success of passive restoration methods depends upon this understanding.

For a 54-year chronosequence of eleven tidal wetland restoration sites in the Lower …

Using Critical Physical Geography To Map The Unintended Consequences Of Conservation Management Programs, Melanie Malone

Dissertations and Theses

A variety of conservation trends have gained and lost favor throughout the years in agriculture, with U.S. Farm Bills often influencing what conservation practices are implemented by farming communities throughout the U.S. This dissertation focuses on the unintended consequences of conservation management practices in the Fifteenmile Watershed of Wasco County, Oregon. Specifically, I seek to address how farmer enrollment in various conservation techniques, loosely defined as no-till agriculture, has affected soil and water quality through the increased use of herbicide, and subsequently rendered ecological and human health vulnerable. Using a critical physical geography framework, I address both the biophysical factors …

Effects Of Antibiotic Mixtures Across Marine Intertidal Trophic Levels: Examining Environmentally-Relevant Contaminant Concentrations, Jaclyn Rebecca Teixeira

Dissertations and Theses

Approximately 48% of Americans use prescription drugs within each 30-day period, and there are signs this trend is increasing. Although many studies track pharmaceuticals’ fates in contaminating waterways, only fairly recent efforts have examined the potential impacts of these drugs on non-target organisms. The antibiotics sulfamethoxazole and trimethoprim, often prescribed together to treat bacterial infections, have been detected worldwide in marine and estuarine environments at concentrations up to 700-800 ng/L each. Toxic effects of these drugs have been identified in freshwater organisms, with synergistic effects observed in short-term studies of mixtures of the two; however, little research has examined possible …

A Landscape Approach To Determining And Predicting Juvenile Coho Salmon (Oncorhynchus Kisutch) Movement Timing And Growth Patterns Prior To Ocean Entry, Amelia Lee Johnson

Dissertations and Theses

Coho salmon (Oncorhynchus kisutch) rely on unique habitats during the winter season, which may dictate how much individuals may grow and when migration from freshwater rearing habitat to the ocean occurs. Here I analyze movement timing and growth patterns for coho salmon through a field-based study and a literature review. For the field portion, I examined hatchery-stocked juvenile coho salmon across four stream basins in the Russian River watershed, California to determine the relative importance of climate, landscape, and fish size metrics in predicting movement and growth patterns over a winter rearing and spring smolt outmigration time period …

Improving The Roadside Environment Through Integrating Air Quality And Traffic-Related Data, Christine M. Kendrick

Dissertations and Theses

Urban arterial corridors are landscapes that give rise to short and long-term exposures to transportation-related pollution. With high traffic volumes, congestion, and a wide mix of road users and land uses at the road edge, urban arterial environments are important targets for improved exposure assessment to traffic-related pollution. Applying transportation management strategies to reduce emissions along arterial corridors could be enhanced if the ability to quantify and evaluate such actions was improved. However, arterial roadsides are under-sampled in terms of air pollution measurements in the United States and using observational data to assess such effects has many challenges such as …

Do Forest Commons Contribute To International Environmental Initiatives? A Socio-Ecological Analysis Of Nepalese Forest Commons In View Of Redd+, Harisharan Luintel

Dissertations and Theses

Forests in developing countries have the potential to contribute to global efforts to mitigate climate change, promote biodiversity and support the livelihoods of rural, local people. Approximately one-fourth of such forests are under the control of local communities, which primarily manage forests for subsistence and to meet their livelihood needs. The trend of bottom-up community control is increasing through the adoption of decentralization reforms over the last 40 years. In contrast, the United Nations has introduced the top-down program, Reducing Emissions from Deforestation and Forest Degradation (REDD+) for the conservation and enhancement of forest carbon and the sustainable management of …

The Terroir Of Pinot Noir Wine In The Willamette Valley, Oregon : A Broad Analysis Of Vineyard Soils, Grape Juice And Wine Chemistry, Kathryn Nora Barnard

Dissertations and Theses

Terroir is determined by a combination of factors in the vineyard including the grape varietal, geology and soil, soil hydrology, physiography, and climate. Although most studies have examined regional differences in wine flavors and associated provenance of wine based on chemistry, few have examined the chemistry of the soil and the ability to trace that chemistry to grape juice and, finally, to the wine. This dissertation examines what soil physical and chemical differences specific to this region might influence grape juice chemistry and wine chemistry.

Wine-grapes in the Willamette Valley, Oregon, are grown on three major soil parent materials: volcanic, …

Green Roofs And Urban Biodiversity: Their Role As Invertebrate Habitat And The Effect Of Design On Beetle Community, Sydney Marie Gonsalves

Dissertations and Theses

With over half the world's population now living in cities, urban areas represent one of earth's few ecosystems that are increasing in extent, and are sites of altered biogeochemical cycles, habitat fragmentation, and changes in biodiversity. However, urban green spaces, including green roofs, can also provide important pools of biodiversity and contribute to regional gamma diversity, while novel species assemblages can enhance some ecosystem services. Green roofs may also mitigate species loss in urban areas and have been shown to support a surprising diversity of invertebrates, including rare and endangered species. In the first part of this study I reviewed …