Life Sciences Commons^™

Phylogenetic Relationships Of African Microhylid Frogs Inferred From Dna Sequences Of Mitochondrial 12s And 16s Rrna Genes, Simon P. Loader, David J. Gower, Kim M. Howell, Nike Doggart, Mark-Oliver Rödel, Barry T. Clarke, Rafael O. De Sá, Bernard L. Cohen, Mark Wilkinson

Biology Faculty Publications

The phylogenetic relationships of microhylid frogs are poorly understood. The first molecular phylogeny for continental African microhylids is presented, including representatives of all subfamilies, six of the eight genera, and the enigmatic hemisotid Hemisus. Mitochondrial 12S and 16S rRNA sequence data were analysed using parsimony, likelihood and Bayesian methods. Analyses of the data are consistent with the monophyly of all sampled subfamilies and genera. Hemisus does not nest within either brevicipitines or non-brevicipitines. It is possibly the sister group to brevicipitines, in which case brevicipitines might not be microhylids. Phrynomantis and Hoplophryne potentially group with non-African, non-brevicipitine microhylids, in …

Monitoring Activity Of Drosophila Larvae: Impedance & Video Microscopy Measures, Ann Simone Cooper, Robin L. Cooper

Biology Faculty Publications

No abstract provided.

Monitoring Heart Rate In Drosophila Larvae By Various Approaches, Sameera Dasari, Robin L. Cooper

Biology Faculty Publications

No abstract provided.

Monitoring Carbon Dioxide Production By Drosophila Larvae, Robin L. Cooper, D. Nicholas Mcletchie

Biology Faculty Publications

No abstract provided.

Planting Date Effects On The Germinability And Seedling Vigor Of Abutilon Theophrasti Seeds, R E. Nurse, A Ditommaso, Ricardo A. Ramirez

Biology Faculty Publications

Abutilon theophrasti (Malvaceae) is a troublesome annual weed in many maize and soybean cropping systems of Canada and the United States. Seeds of A. theophrasti exhibit physical dormancy. Differences in the growing environment of parent plants may influence the germinability of seeds and vigour of seedlings produced by this species because of variation in resource allocation to seed development. Thus, the germinability of seeds and subsequent seedling vigour were examined for A. theophrasti plants grown in monoculture at a density of 4.2 plants m -2 under varying natural photoperiods in central New York State. Treatments were established by transplanting A. …

Apparent Sibling Rivalry In The Freshwater Clam Sphaerium Striatinum, Mark Beekey, Ronald H. Karlson

Biology Faculty Publications

In Sphaerium striatinum, a freshwater brooding bivalve, up to 97.5% of offspring that adults initially produce fail to reach independence. Marsupial sacs, specialized extensions of gill filaments that act as nurseries, initially contain multiple offspring in various sizes and stages of development. However, by the time offspring reach later stages of development, marsupial sacs typically contain only one offspring. Brood mortality is hypothesized to be the result of competition among embryos for nutrients and/or space. Sphaeriid eggs do not contain enough yolk for offspring to complete development. Adults supply additional nutrients required to reach independence. Brood capacity is limited by …

Two Drosophila Suppressors Of Cytokine Signaling (Socs) Differentially Regulate Jak And Egfr Pathway Activities, Jason S. Rawlings, Gabriela Rennebeck, Susan M.W. Harrison, Rongwen Xi, Douglas A. Harrison

Biology Faculty Publications

BACKGROUND: The Janus kinase (JAK) cascade is an essential and well-conserved pathway required to transduce signals for a variety of ligands in both vertebrates and invertebrates. While activation of the pathway is essential to many processes, mutations from mammals and Drosophila demonstrate that regulation is also critical. The SOCS (Suppressor Of Cytokine Signaling) proteins in mammals are regulators of the JAK pathway that participate in a negative feedback loop, as they are transcriptionally activated by JAK signaling. Examination of one Drosophila SOCS homologue, Socs36E, demonstrated that its expression is responsive to JAK pathway activity and it is capable of downregulating …

Growth Of Stygobitic (Orconectes Australis Packardi) And Epigean (Orconectes Cristavarius) Crayfishes Maintained In Laboratory Conditions, Ann-Simone Cooper, Robin L. Cooper

Biology Faculty Publications

This study reports on maintenance and growth of the cave crayfish, Orconectes australis packardi, and the epigean crayfish, Orconectes cristavarius, with laboratory conditions for 1 and 2 years. The O. a. packardi survived well compared to the O. cristavarius in captivity. The poor survival of the epigean species was probably due to unsuitable conditions. The epigean as well as the cave crayfish molted and grew in captivity, but without any significant difference in molt frequency between species. In the first year, total body length was obtained to assay growth, whereas in the second year the more accurate measure …

The Bvg Virulence Control System Regulates Biofilm Formation In Bordetella Bronchiseptica, Yasuhiko Irie, Seema Mattoo, Ming H. Yuk

Biology Faculty Publications

Bordetella species utilize the BvgAS (Bordetella virulence gene) two-component signal transduction system to sense the environment and regulate gene expression among at least three phases: a virulent Bvg⁺ phase, a nonvirulent Bvg⁻ phase, and an intermediate Bvgⁱ phase. Genes expressed in the Bvg⁺ phase encode known virulence factors, including adhesins such as filamentous hemagglutinin (FHA) and fimbriae, as well as toxins such as the bifunctional adenylate cyclase/hemolysin (ACY). Previous studies showed that in the Bvgⁱ phase, FHA and fimbriae continue to be expressed, but ACY expression is significantly downregulated. In this report, we determine …

Zebra Mussels Affect Benthic Predator Foraging Success, Mark Beekey, D. J. Mccabe, I. E. Marsden

Biology Faculty Publications

The introduction of zebra mussels (Dreissena spp.) to North America has resulted in dramatic changes to the complexity of benthic habitats. Changes in habitat complexity may have profound effects on predator-prey interactions in aquatic communities. Increased habitat complexity may affect prey and predator dynamics by reducing encounter rates and foraging success. Zebra mussels form thick contiguous colonies on both hard and soft substrates. While the colonization of substrata by zebra mussels has generally resulted in an increase in both the abundance and diversity of benthic invertebrate communities, it is not well known how these changes affect the foraging efficiencies of …

From Biomedicine To Natural History Research: Est Resources For Ambystomatid Aalamanders, Srikrishna Putta, Jeramiah J. Smith, John A. Walker, Mathieu Rondet, David W. Weisrock, James Monaghan, Amy K. Samuels, D. Kevin Kump, David C. King, Nicholas J. Maness, Bianca Habermann, Elly Tanaka, Susan V. Bryant, David M. Gardiner, David M. Parichy, S. Randal Voss

Biology Faculty Publications

BACKGROUND: Establishing genomic resources for closely related species will provide comparative insights that are crucial for understanding diversity and variability at multiple levels of biological organization. We developed ESTs for Mexican axolotl (Ambystoma mexicanum) and Eastern tiger salamander (A. tigrinum tigrinum), species with deep and diverse research histories.

RESULTS: Approximately 40,000 quality cDNA sequences were isolated for these species from various tissues, including regenerating limb and tail. These sequences and an existing set of 16,030 cDNA sequences for A. mexicanum were processed to yield 35,413 and 20,599 high quality ESTs for A. mexicanum and A. t. tigrinum, respectively. Because the …

Integrating Research And Teaching Labs With The Module Evolution Approach, Michael S. Reagan

Biology Faculty Publications

No abstract provided.

A New Species Of Callulina (Anura: Microhylidae) From The West Usambara Mountains, Tanzania, Rafael O. De Sá, Simon P. Loader, Alan Channing

Biology Faculty Publications

The description of the species Callulina kreffti was based on specimens collected in the East Usambara Mountains of Tanzania. Successive collecting has shown this species to be widely distributed through the Eastern Arc Mountains. Advertisement calls from populations in the type locality of Callulina kreffti were compared with calls from populations in the West Usambara Mountains. Analysis of the calls suggested that these two populations of Callulina represent two separate taxa. Subsequent morphological and molecular investigations indicated that these two populations are distinct. Herein, we describe a new Callulina species on the basis of call, morphology and molecular sequences.

A New Toad (Anura: Bufonidae) From Uruguay, Raúl Maneyro, Diego Arrieta, Rafael O. De Sá

Biology Faculty Publications

A new species of toad is described from small streams in the hills of Cuchilla de Haedo and Cuchilla Grande in northeastern Uruguay. Specimens of the new species were previously mistaken for Bufo arenarum; they differ from B.arenarum by having elongated parotoid glands and reddish-brown parotoid and cephalic crests. A discriminant analysis resulted in three groups corresponding to B. arenarum, Bufo rufus, and the specimens herein described as a new species.

Drosophila As An Emerging Model To Study Metastasis, Madhuri Kango-Singh, Georg Halder

Biology Faculty Publications

Metastasis is the primary cause of human cancer-related deaths. Two recent studies describe a system for testing how multiple genetic events synergize to promote neoplastic growth and metastasis in Drosophila, paving the way for systematic approaches to understanding metastasis using the powerful tools of Drosophila genetics.

Phylogenetic Signal And The Utility Of 12s And 16s Mtdna In Frog Phylogeny, S. Hertwig, Rafael O. De Sá, A. Haas

Biology Faculty Publications

Genes selected for a phylogenetic study need to contain conserved information that reflects the phylogenetic history at the specific taxonomic level of interest. Mitochondrial ribosomal genes have been used for a wide range of phylogenetic questions in general and in anuran systematics in particular. We checked the plausibility of phylogenetic reconstructions in anurans that were built from commonly used 12S and 16S rRNA gene sequences. For up to 27 species arranged in taxon sets of graded inclusiveness, we inferred phylogenetic hypotheses based on different apriori decisions, i.e. choice of alignment method and alignment parameters, including/excluding variable sites, choice of reconstruction …

Seed Mass And Morphology In Outcrossing And Selfing Species Of Clarkia (Onagraceae): An Sem Study, Jennifer L. Knies, Veronique A. Delesalle, A. R. Cavaliere

Biology Faculty Publications

Seeds from three pairs of outcrossing-selfing sister taxa from the genus Clarkia (farewell-to-spring, Onagraceae)—Clarkia unguiculata, Clarkia exilis, Clarkia xantiana ssp. xantiana and ssp. parviflora, and Clarkia concinna ssp. concinna and ssp. automixa—were studied to assess the effects of contrasting mating systems on seed mass and seed morphology. For each outcrossing-selfing comparison, the seed mass of the selfing taxon was less than that of the outcrossing taxon. Seed mass typically differed significantly among populations within a taxon. Scanning electron microscopy showed that the seeds from all these taxa share several characteristics: a bullet to shield shape, a reticulate exotesta pattern, presence …

Loss-Of-Function Analysis Of Epha Receptors In Retinotectal Mapping, David Feldheim, Masaru Nakamoto, Miriam Osterfield, Nicholas Gale, Thomas Dechiara, Rajat Rohatgi, George Yancopoulos, John Flanagan

Biology Faculty Publications

EphA tyrosine kinases are thought to act as topographically specific receptors in the well-characterized projection map from the retina to the tectum. Here, we describe a loss-of-function analysis of EphA receptors in retinotectal mapping. Expressing patches of a cytoplasmically truncated EphA3 receptor in chick retina caused temporal axons to have reduced responsiveness to posterior tectal repellent activity in vitro and to shift more posteriorly within the map in vivo . A gene disruption of mouse EphA5, replacing the intracellular domain with beta-galactosidase, reduced in vitro responsiveness of temporal axons to posterior target membranes. It also caused map abnormalities in vivo …

On The Engimatic Distribution Of The Honduran Endemic Leptodactylus Silvanimbus (Amphibia: Anura: Leptodactylidae), W. R. Heyer, Rafael O. De Sá, Sarah Muller

Biology Faculty Publications

Most species of the frog genus Leptodactylus occur in South America, and all authors who have treated the zoogeography of the genus have concluded that it originated somewhere in South America (e.g., Savage 1982). Savage (1982, 518) summarized the historical herpetofaunal units of the Neotropics as follows: "All evidence points to an ancient contiguity and essential similarity of a generalized tropical herpetofauna that ranged over tropical North, Middle, and most of South America in Cretaceous-Paleocene times. Descendents of this fauna are represented today by the South and Middle American tracks (Elements). To the north of this fauna ranged a subtropical-temperate …

Distribución Geográfica De La Fauna De Anfibios Del Uruguay, Diego Nuñez, Raúl Maneyro, José A. Langone, Rafael O. De Sá

Biology Faculty Publications

Datos precises sobre la distribución geográfica de los organismos de una región son necesarios y prerrequisito para entender las interrelaciones ecológicas entre las comunidades biológicas. Esta información también contribuye a entender el componente histórico de la región posibilitando la determinación de centros de origen y el establecimiento de patrones de diversidad (Ron, 2000), así mismo posibilita realizar inferencias acerca de los mecanismos de especiación en los diferentes grupos zoológicos (Bridarolli & Di Tada, 1994).

La distribución geográfica de los anfibios en Uruguay ha sido parcialmente reportada (Achaval & Olmos, 1997; Langone, 1995; Maneyro et al, 1995; Maneyro & Langone, 2001). …

Características Histológicas De La Tumefacción Frontal De Melanophryniscus (Amphibia: Anura: Bufonidae), Daniel E. Naya, José A. Langone, Rafael O. De Sá

Biology Faculty Publications

Se analizó la histología tegumentaria de la región cefálica en seis especies del género Melanophryniscus, pertenecientes a los grupos stelzneri (4) y tumifrons (2), con el objetivo de esclarecer la estructura de la tumefacción frontal y su posible función. Las características generales de la histología del grupo stelzneri, coincidieron con las descripciones tegumentarias existentes para el género. Sin embargo, la región cefálica frontal en las dos especies del grupo tumifrons muestran cambios histológicos correlacionados a la tumefacción frontal. Esta estructura presenta una organización similar a otras macroglándulas presentes en la dermis de anuros (e.g., parotoides, paracnémicas), y por tanto se …

A Survey Of Antibiotic Resistance Among Coliform Bacteria Isolated From The Missouri River, Sara E. Mcdonnell, Amy M. Treonis

Biology Faculty Publications

The prevalence of antibiotic resistant microorganisms in the environment is not well known but could represent a challenge to maintaining public health in the future. Fecal waste from livestock facilities, where antibiotics are routinely used, is recognized as a significant source of pollution to surface waters in the United States. We collected water from the Missouri River across a winter to spring seasonal change in order to survey the density of coliform bacteria. We tested bacterial isolates for resistance to penicillin, tetracycline, ampicillin, erythromycin, and ciprofloxacin. Coliform density in Missouri River water generally was high throughout the study (0-405 cfu …

Morphological Characteristics And Species Separation Of Hawaiian Postlarval Amphidromous Fishes, M. Eric Benbow, Albert J. Burky, Carl M. Way

Biology Faculty Publications

There are five Hawaiian amphidromous fishes (Gobiidae: Lentipes concolor, Awaous guamensis, Sicyopterus stimpsoni, Stenogobius hawaiiensis; Eleotridae: Eleotris sandwicensis). Amphidromous adults deposit eggs on the stream bottom. After hatching, larvae drift to the ocean for growth followed by postlarval migration back into the streams. Postlarvae were collected to construct a dichotomous identification key based on 12 morphological measures and ray counts from four fins. Overall, the presense of fused pelvic fins, standard length (SL), and fin ray numbers were the most useful in species separation. Gobies were separated from the eleotrid by the former having fused …

Snakes Of The United States And Canada: Natural History And Care In Captivity, Alan H. Savitzky

Biology Faculty Publications

No abstract provided.

Tradeoffs In Community Properties Through Time In A Desert Rodent Community, Ethan P. White, S.K. Morgan Ernest, K. M. Thibault

Biology Faculty Publications

Resource limitation represents an important constraint on ecological communities, which restricts the total abundance, biomass, and community energy flux a given community can support. However, the exact relationship among these three measures of biological activity remains unclear. Here we use a simple framework that links abundance and biomass with an energetic constraint. Under constant energetic availability, it is expected that changes in abundance and biomass can result from shifts in the distribution of individual masses. We test these predictions using long-term data from a desert rodent community. Total energy use for the community has not changed directionally for 25 years, …

Temporal Dynamics In The Structure Andcomposition Of A Desert Rodent Community, K. M. Thibault, Ethan P. White, S.K. Morgan Ernest

Biology Faculty Publications

The rank-abundance distribution (RAD) represents the manner in which species divide resources. Community-specific division rules that determine resource allocation among species, and thereby the shape of the RAD, have been hypothesized to account for observed stability of local species richness over time. While the shape of the RAD has been well studied, the temporal dynamics of this distribution have received much less attention. Here we assess changes in the shape of the RAD through time in a desert rodent community in Arizona (USA). Because energy use may be more appropriate for studying resource division than abundance, we also evaluate an …

Similarities In Body Size Distributions Of Small-Bodied Flyingvertebrates, B. A. Maurer, J. Alroy, J. H. Brown, T. Dayan, B. Enquist, S.K. Morgan Ernest, E. Hadly, J. P. Haskell, D. Jablonski, K. E. Jones, D. M. Kaufman, K. Lyons, K. Niklas, W. Porter, K. Roy, F. A. Smith, B. Tiffney, M. R. Willig

Biology Faculty Publications

Since flight imposes physical constraints on the attributes of a flying organism, it is expected that the distribution of body sizes within clades of small-bodied flying vertebrates should share a similar pattern that reflects these constraints. We examined patterns in similarities of body mass distributions among five clades of small-bodied endothermic vertebrates (Passeriformes, Apodiformes + Trochiliformes, Chiroptera, Insectivora, Rodentia) to examine the extent to which these distributions are congruent among the clades that fly as opposed to those that do not fly. The body mass distributions of three clades of small-bodied flying vertebrates show significant divergence from the distributions of …

Similarity Of Mammalian Body Size Acrossthe Taxonomic Hierarchy And Across Space And Time, F. A. Smith, J. H. Brown, J. P. Haskell, S. K. Lyons, J. Alroy, E. L. Charnov, T. Dayan, B. J. Enquist, S.K. Morgan Ernest, E. A. Hadly, K. E. Jones, D. M. Kaufman, P. A. Marquet, B. A. Maurer, K. J. Niklas, W. P. Porter, B. Tiffney, M. R. Willig

Biology Faculty Publications

Although it is commonly assumed that closely related animals are similar in body size, the degree of similarity has not been examined across the taxonomic hierarchy. Moreover, little is known about the variation or consistency of body size patterns across geographic space or evolutionary time. Here, we draw from a data set of terrestrial, nonvolant mammals to quantify and compare patterns across the body size spectrum, the taxonomic hierarchy, continental space, and evolutionary time. We employ a variety of statistical techniques including “sib-sib” regression, phylogenetic autocorrelation, and nested ANOVA. We find an extremely high resemblance (heritability) of size among congeneric …

Least Shrew (Cryptotis Parva ) In Extreme West-Central Nebraska, Keith Geluso, Jeremy A. White, Michael A. Bogen

Biology Faculty Publications

During the past 35 years, the least shrew (Cryptotis parva) has expanded its distribution along riverine and other mesic corridors in western parts of its distribution, although some recently discovered populations in the West might represent relicts of a previous Pleistocene distribution. In Nebraska, the least shrew originally was known only from eastern and central parts of the state, but recent records are now available from extreme west-central Nebraska and the northwestern corner of the state. Our record from west-central Nebraska probably represents recent westward expansion of C. parua along the North Platte River. This capture in Scotts …

Dynamics Of Rodent Assemblages Inhabiting Abandoned Petroleum Landfarms In Oklahoma, James Wilson, R. L. Lochmiller, D. M. Janz

Biology Faculty Publications

Studies on the effects of anthropogenic contamination on wildlife have largely been focused at the individual level. Biomarkers have been used to monitor changes in the health of individuals exposed to contaminants; however, little attention has been given to the effects of chronic exposure at the population or community levels. We studied rodent assemblages from uncontaminated (reference) sites (n 5 5) and abandoned petrochemical landfarms (n 5 5) in Oklahoma to investigate potential alterations in community structure and composition. Rodent assemblages inhabiting landfarms had lower species diversity, lower richness, and a more even distribution of individuals across species. Reference sites …