Life Sciences Commons^™

Regulation Of Regeneration In Arabidopsis Thaliana, Md Khairul Islam, Sai Teja Mummadi, Sanzhen Liu, Hairong Wei

Michigan Tech Publications, Part 2

We employed several algorithms with high efficacy to analyze the public transcriptomic data, aiming to identify key transcription factors (TFs) that regulate regeneration in Arabidopsis thaliana. Initially, we utilized CollaborativeNet, also known as TF-Cluster, to construct a collaborative network of all TFs, which was subsequently decomposed into many subnetworks using the Triple-Link and Compound Spring Embedder (CoSE) algorithms. Functional analysis of these subnetworks led to the identification of nine subnetworks closely associated with regeneration. We further applied principal component analysis and gene ontology (GO) enrichment analysis to reduce the subnetworks from nine to three, namely subnetworks 1, 12, and 17. …

Pando's Pulse: Vital Signs Signal Need For Course Correction At World-Renowned Aspen Forest, Paul C. Rogers

Aspen Bibliography

Upland aspen (Populus spp.) forests contribute significantly to biodiversity in their circumboreal role as keystone species. As aspen ecosystems flourish or diminish, myriad dependent species follow suit. The 43-hectare Pando aspen (Populus tremuloides Michx.) clone in Utah, USA, is thought to be the largest living organism on earth, but is faltering due to chronic herbivory. Long-term resilience in aspen communities, including Pando, rests on successful recruitment of vegetative suckers that are nutritiously desirable to browsing ungulates. Here, I evaluate aspen reproduction alongside numerous vital indicators of Pando's status in the first trend assessment of this embattled iconic forest. …

The Influence Of Burn Severity On Post-Fire Spectral Recovery Of Three Fires In The Southern Rocky Mountains, Jaclyn Guz, Florencia Sangermano, Dominik Kulakowski

Geography

Increased wildfire activity and altered post-fire climate in the Southern Rocky Mountains has the potential to influence forest resilience. The Southern Rocky Mountains are a leading edge of climate change and have experienced record-breaking fires in recent years. The change in post-fire regeneration and forest resilience could potentially include future ecological trajectories. In this paper, we examined patterns of post-fire spectral recovery using Landsat time series. Additionally, we utilized random forest models to analyze the impact of climate and burn severity on three fire events in the Southern Rocky Mountains. Fifteen years following the fires, none of the burned stands …

The Aboveground And Belowground Growth Characteristics Of Juvenile Conifers In The Southwestern United States, N. L. Pirtel, R. M. Hubbard, J. B. Bradford, T. E. Kolb, M. E. Litvak, Scott Abella, S. L. Porter, Matthew Petrie

Life Sciences Faculty Research

Juvenile tree survival will play an important role in the persistence of coniferous forests and woodlands in the southwestern United States (SWUS). Vulnerability to climatic and environmental stress declines as trees grow, such that larger, more deeply rooted juveniles are less likely to experience mortality. It is unclear how juvenile conifers partition the aboveground and belowground components of early growth, if growth differs between species and ecosystem types, and what environmental factors influence juvenile carbon allocation above- or belowground. We developed a novel data set for four juvenile conifer groups (junipers, piñon pines, ponderosa pines, firs; 1121 juveniles sampled, 221 …

Vegetative And Edaphic Responses In A Northern Mixed Conifer Forest Three Decades After Harvest And Fire: Implications For Managing Regeneration And Carbon And Nitrogen Pools, R. Kasten Dumroese, Martin Jurgensen, Deborah S. Page-Dumroese

Michigan Tech Publications

Research Highlights: This experiment compares a range of combinations of harvest, prescribed fire, and wildfire. Leveraging a 30-year-old forest management-driven experiment, we explored the recovery of woody species composition, regeneration of the charismatic forest tree species Larix occidentalis Nutt., and vegetation and soil carbon (C) and nitrogen (N) pools. Background and Objectives: Initiated in 1967, this experiment intended to explore combinations of habitat type phases and prescribed fire severity toward supporting regeneration of L. occidentalis. At onset of the experiment, a wildfire affected a portion of the 60 research plots, allowing for additional study. Our objective was to better understand …

Press-Pulse Odocoileus Virginianus Herbivory In Relict Tsuga Canadensis Stands In The Western Upper Peninsula Of Michigan, Usa, Grace Parikh, Christopher R. Webster

Michigan Tech Publications

Ungulate herbivory occurring within a forest plant community’s natural range of variation may help maintain species diversity. However, acute or chronically elevated levels of herbivory can produce dramatic changes in forest communities. For example, chronically high levels of herbivory by white-tailed deer (Odocoileus virginianus Zimmerman) in regions of historically low abundance at northern latitudes have dramatically altered forest community composition. In eastern hemlock (Tsuga canadensis L. Carrière) stands where deer aggregate during winter, high deer use has been associated with a shift towards deciduous species (i.e., maples [Acer spp.]) dominating the regeneration layer. Especially harsh winters can lead to deer …

Short-Term Regeneration Dynamics Of Wyoming Big Sagebrush At Two Sites In Northern Utah, Sara J. Germain, Rebecca K. Mann, Thomas A. Monaco, Kari E. Veblen

Wildland Resources Faculty Publications

Wyoming big sagebrush (Artemisia tridentata ssp. wyomingensis) is a widespread shrub across the western United States, and there is great interest among scientists and land managers in its ecology and conservation, particularly with regard to maintaining structural heterogeneity of sagebrush stands for wildlife habitat and livestock forage. Yet little is known about its short-term regeneration dynamics and the implications of those dynamics for changes in stand structure. We examined changes among sagebrush size classes across 3 years, as well as emergence of sagebrush from seed bank and seed rain samples at 2 sagebrush shrub land sites in northern …

Rapid Regeneration Offsets Losses From Warming-Induced Tree Mortality In An Aspen-Dominated Broad-Leaved Forest In Northern China, Pengwu Zhao, Chongyang Xu, Mei Zhou, Bo Zhang, Peng Ge, Nan Zeng, Hongyan Liu

Aspen Bibliography

Worldwide tree mortality as induced by climate change presents a challenge to forest managers. To successfully manage vulnerable forests requires the capacity of regeneration to compensate for losses from tree mortality. We observed rapid regeneration and the growth release of young trees after warming-induced mortality in a David aspen-dominated (Populus davidiana) broad-leaved forest in Inner Mongolia, China, as based on individual tree measurements taken in 2012 and 2015 from a 6-ha permanent plot. Warming and drought stress killed large trees 10–15 m tall with a total number of 2881 trees during 2011–2012, and also thinned the upper crowns. …

Suckering Response Of Aspen To Traffic-Induced-Root Wounding And The Barrier-Effect Of Log Storage, Kevin N. Renkema, Simon M. Landhausser, Victor J. Lieffers

Aspen Bibliography

In a growth chamber, we tested how the seasonal timing of placing a physical barrier (simulating a possible effect of log storage) and inflicting root damage impacted aspen (Populus tremuloides Michx.) root systems and their suckering capability. Roots from 4-year-old saplings were used, and one half of these root systems had the above-ground portion cut in the winter (dormant) while the other half was cut during the growing season in the summer. Damage was inflicted to the roots by driving a large farm tractor over them, and a covering treatment was applied using a polystyrene board to prevent suckers from …

Post-Fire Demography Of A Dry Eucalypt Forest In The Midlands, Tasmania: A Pilot Study, Christine Urbanowicz

Independent Study Project (ISP) Collection

There have been many efforts to regenerate the threatened and declining dry eucalypt forests found within the Midlands of Tasmania. This pilot study was completed as part of a larger research project on eucalypt regeneration. Researchers need to know where recruits are most successful in order to appropriately place regeneration microsites. I have begun characterizing the baseline demography of a recently burnt remnant forest. I had two objectives: 1. to characterize the stand structure where recruits are successful, and 2. to describe where the recruits are within this structure. Data on location, size, and life history stage of trees were …

Does Moose Browsing Threaten European Aspen Regeneration In Koli National Park, Finland?, Sauli Harkonen, Kalle Eerikainen, Riikka Lahteenmaki, Risto Heikkila

Aspen Bibliography

Large European aspen (Populus tremula) trees host hundreds of species of which many are threatened species of conifer-dominated, old-growth boreal forests. Aspen is also one of the deciduous tree species most intensively used by moose (Alces alces) in Finland. In conservation areas aspen regeneration is facilitated by large-scale disturbances, especially fires and windstorms, and also by mortality of individual trees and small-scale disturbances that create small openings. These aggregated patches of young aspens provide high quality feeding sites for moose. In Finland, it has been hypothesized that intense browsing pressure by moose on aspen may prevent new aspen cohorts from …

A Link Between Hurricane-Induced Tree Sprouting, High Stem Density And Short Canopy In Tropical Dry Forest, Skip Van Bloem, Peter G. Murphy, Ariel E. Lugo

Publications

The physiognomy of Caribbean dry forest is shorter, denser and contains a greater proportion of multi-stemmed trees than other neotropical dry forests. Our previous research, conducted after Hurricane Georges in 1998, has shown that dry forest trees sprout near the base following hurricane disturbance, even if the trees have not incurred structural damage. However, for these hurricane-induced sprouts to contribute to the physiognomy of the forest, they must grow and survive. We followed sprout dynamics and stem mortality on 1,407 stems from 1998, after Hurricane Georges, until 2005. The number of surviving sprouts and the proportion of sprouting stems decreased …

Natural Disturbances And The Physiognomy Of Pine Savannas : A Phenomenological Model, Frank S. Gilliam, William J. Platt, Robert K. Peet

Biological Sciences Faculty Research

Abstract. Question: The decline of the Pinus palustris ecosystems has resulted from anthropogenic influences, such as conversion to pine plantation forestry, agriculture and land development, all of which are closely related to increases in human populations. Other effects, however, have arisen from alterations in disturbance regimes that maintain the structure and function of these ecosystems. How have alterations of the disturbance regime altered the physiognomy of ‘old-growth’ stands, and what are the implications for ecosystem conservation and restoration?

Methods: In contrast to models that emphasize close interactions among the vertically complex strata, we develop a conceptual phenomenological model for the …

Towards Sustainable Management Of Louisiana's Coastal Wetland Forests: Problems, Contraints, And A New Beginning, William Conner, J L. Chambers, R F. Keim, S P. Faulkner, J W. Day, E S. Gardiner, M S. Hughes, S L. King, K W. Mcleod, C A. Miller, J A. Nyman, G P. Shaffer

Publications

Over 345,000 ha of forested swamps occur throughout the Mississippi River Deltaic Plain. Natural and anthropogenic changes in hydrology and geomorphology at local and landscape levels have reduced the productivity in many of these coastal wetland forests areas and have caused the complete loss of forest cover in some places. A summary and interpretation of the available
science, suggestions for policy change, and a multidisciplinary (multi-responsibility) approach were needed to address these issues [in the context of private land]. In response, the Louisiana Governor's office formed a Coastal Wetland Forest Conservation and Use Science Working Group (SWG) and an associated …

Conservation Of Louisiana's Coastal Wetland Forests, William Conner, Jim L. Chambers, Richard F. Keim, John W. Day Jr, Stephen P. Faulkner, Emile S. Gardiner, Melinda S. Hughes, Sammy L. King, Kenneth W. Mcleod, Craig A. Miller, J Andrew Nyman, Gary P. Shaffer

Publications

No abstract provided.

Long-Term Success Of Stump Sprouts In High-Graded Baldcypress-Water Tupelo Swamps In The Mississippi Delta, William Conner, Richard F. Keim, Jim L. Chambers, Melinda S. Hughes, Luben D. Dimov, Gary P. Shaffer, Emile S. Gardiner, John W. Day

Publications

Regeneration of baldcypress (Taxodium distichum (L.) Rich.) and water tupelo (Nyssa aquatica L.) in swamps of the deltaic plain of the Mississippi River are of major importance for ecosystem sustainability and forest management in the context of regional hydrological changes. Water tupelo often forms prolific sprouts from cut stumps, and baldcypress is one of few conifers to produce stump sprouts capable of becoming full-grown trees. Previous studies have addressed early survival of baldcypress stump sprouts, but have not addressed the likelihood of sprouts becoming an important component of mature stands. We surveyed stands in southeastern Louisiana that were partially logged …

Restoration Of Aspen-Dominated Ecosystems In The Lake States, Douglas M. Stone, John D. Elioff, Donald V. Potter, Donald B. Peterson, Robert Wagner

Aspen Bibliography

A reserve tree method (RTM) of harvesting was installed in six 70 to 75 year old aspen dominated stands to determine if retaining 10 to 15 dominant aspen per acre would decrease sucker density to facilitate restoration of a conifer component. A reserve shelterwood cut was applied to three additional stands to evaluate performance of white pine planted under 50% crown cover. After the first full growing season following harvest, 96% of the RTM harvested areas were stocked; sucker density averaged 27000 per acre versus 38.2 k per acre on a clearcut control, 41% greater. Basal diameter of dominant suckers …

Long-Term Aspen Exclosures In The Yellowstone Ecosystem, Charles E. Kay

Aspen Bibliography

Aspen has been declining in the Yellowstone Ecosystem for more than 80 years. Some authors have suggested that aspen is a marginal plant community in Yellowstone and that recent climatic variation has adversely affected aspen, while others contend that excessive browsing by native ungulates is primarily responsible for aspen’s widespread decline. To test these hypotheses, I measured all the long-term aspen exclosures (n = 14) in the Yellowstone Ecosystem. Aspen stands inside all exclosures successfully produced new stems greater than 2 m tall without fire or other disturbance, while few outside stands successfully regenerated due to repeated browsing. Understory species …

Clonal Propagation In Non-Aspen Popular Hybrids, Y.W. Chun

Aspen Bibliography

Species and hybrids of Populus are considered ideal species for pulpwood, lumber production, and woody biomass production because of their rapid growth, ease of establishment through stem or root cuttings, and relative ease of coppice regeneration [19].

Regeneration Of Aspen By Suckering On Burned Sites In Western Wyoming, D.L. Bartos, W.F. Mueggler, R.B. Campbell, Jr.

Aspen Bibliography

Approximately 2.8 million ha of woodlands dominated by quaking aspen (Populus tremuloides Michx.) are scattered throughout the Western United States (Green and Van Hooser 1983).

Mixed Conifer And Aspen Regeneration In Small Clearcuts Within A Partially Harvested Arizona Mixed Conifer Forest, P.F. Ffolliott, G.J. Gottfried

Aspen Bibliography

Southwestern mixed conifer forests are found on high-elevation sites, generally above 8,000 feet, throughout Arizona, New Mexico, and southwestern Colorado.

A Survey Of The Harvesting Histories Of Some Poorly Regenerated Aspen Stands In Northern Minnesota, P.C. Bates, C.R. Blinn, A.A. Alm

Aspen Bibliography

No abstract provided.

Silviculture And Management Of Aspen In Canada: The Western Canada Scene, S. Navratil, I.E. Bella, E.B. Peterson

Aspen Bibliography

No abstract provided.

Tall Shrub Dynamics In Northern Minnesota Aspen And Conifer Forests, J.C. Balogh, D.F. Grigal

Aspen Bibliography

No abstract provided.

Fire Effects In Northeastern Forests: Aspen, C. Rouse

Aspen Bibliography

No abstract provided.

Aspen Regeneration In 6- To 10-Year-Old Clearcuts In Southwestern Colorado, Glenn L. Crouch

Aspen Bibliography

No abstract provided.

Ruffed Grouse Habitat Relationships In Aspen And Oak Forests Of Central Wisconsin Usa, J.F. Kubisiak

Aspen Bibliography

No abstract provided.

Aspen Regeneration After Commercial Clearcutting In Southwestern Colorado, G.L. Crouch

Aspen Bibliography

No abstract provided.

Effects Of Partial Cutting On Diseases, Mortality, And Regeneration Of Rocky Mountain Aspen Stands, James W. Walters, Thomas E. Hinds, David W. Johnson, Jerome Beatty

Aspen Bibliography

No abstract provided.

Stand Age Analysis Of Timber On Mississippi’S Private Nonindustrial Forests, Steven H. Bullard, G. H. Weaver, Willem W. S. Van Hees

Faculty Publications

Most of the current pine timber acreage in Mississippi developed through the reversion of large acreages of agricultural cropland to forestry. Now that cropland retirement has ceased, management practices must provide· for pine regeneration on existing forest lands. Harvesting practices that remove higher-valued pine timber from private, nonindustrial pine lands have created large acreages of poorly stocked, low quality hardwood stands.