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Articles 1 - 15 of 15
Full-Text Articles in Life Sciences
Water Stress Strengthens Mutualism Among Ants, Trees, And Scale Insects, Elizabeth G. Pringle, Erol Akc¸Ay, Ted K. Raab, Rodolfo Dirzo, Deborah M. Gordon
Water Stress Strengthens Mutualism Among Ants, Trees, And Scale Insects, Elizabeth G. Pringle, Erol Akc¸Ay, Ted K. Raab, Rodolfo Dirzo, Deborah M. Gordon
Ted K. Raab
Abiotic environmental variables strongly affect the outcomes of species interactions. For example, mutualistic interactions between species are often stronger when resources are limited. The effect might be indirect: water stress on plants can lead to carbon stress, which could alter carbon-mediated plant mutualisms. In mutualistic ant–plant symbioses, plants host ant colonies that defend them against herbivores. Here we show that the partners’ investments in a widespread ant–plant symbiosis increase with water stress across 26 sites along a Mesoamerican precipitation gradient. At lower precipitation levels, Cordia alliodora trees invest more carbon in Azteca ants via phloem-feeding scale insects that provide the …
The Contribution Of Fe (Iii) And Humic Acid Reduction To Ecosystem Respiration In Drained Thaw Lake Basins Of The Arctic Coastal Plain, David A. Lipson, Ted K. Raab, Dominic Goria, Jaime Zlamal
The Contribution Of Fe (Iii) And Humic Acid Reduction To Ecosystem Respiration In Drained Thaw Lake Basins Of The Arctic Coastal Plain, David A. Lipson, Ted K. Raab, Dominic Goria, Jaime Zlamal
Ted K. Raab
Previous research showed that anaerobic respiration using iron (Fe) oxides as terminal electron acceptor contributed substantially to ecosystem respiration (ER) in a drained thaw lake basin (DTLB) on the Arctic coastal plain. As DTLB age, the surface organic layer thickens, progressively burying the Fe-rich mineral layers. We therefore hypothesized that Fe (III) availability and Fe reduction would decline with basin age. We studied four DTLB across an age gradient, comparing seasonal changes in the oxidation state of dissolved and extractable Fe pools and the estimated contribution of Fe reduction to ER. The organic layer thickness did not strictly increase with …
Metagenomic Insights Into Anaerobic Metabolism Along An Arctic Peat Soil Profile, David A. Lipson, John M. Haggerty, Archana Srinivas, Ted K. Raab, Shashank Sathe, Elizabeth A. Dinsdale
Metagenomic Insights Into Anaerobic Metabolism Along An Arctic Peat Soil Profile, David A. Lipson, John M. Haggerty, Archana Srinivas, Ted K. Raab, Shashank Sathe, Elizabeth A. Dinsdale
Ted K. Raab
A metagenomic analysis was performed on a soil profile from a wet tundra site in northern Alaska. The goal was to link existing biogeochemical knowledge of the system with the organisms and genes responsible for the relevant metabolic pathways. We specifically investigated how the importance of iron (Fe) oxides and humic substances (HS) as terminal electron acceptors in this ecosystem is expressed genetically, and how respiratory and fermentative processes varied with soil depth into the active layer and into the upper permafrost. Overall, the metagenomes reflected a microbial community enriched in a diverse range of anaerobic pathways, with a preponderance …
Evidence That Glucose Is The Major Transferred Metabolite In Dinoflagellate–Cnidarian Symbiosis, Matthew S. Burriesci, Ted K. Raab, John R. Pringle
Evidence That Glucose Is The Major Transferred Metabolite In Dinoflagellate–Cnidarian Symbiosis, Matthew S. Burriesci, Ted K. Raab, John R. Pringle
Ted K. Raab
Reef-building corals and many other cnidarians are symbiotic with dinoflagellates of the genus Symbiodinium. It has long been known that the endosymbiotic algae transfer much of their photosynthetically fixed carbon to the host and that this can provide much of the hostʼs total energy. However, it has remained unclear which metabolite(s) are directly translocated from the algae into the host tissue. We reexamined this question in the small sea anemone Aiptasia using labeling of intact animals in the light with 13C-bicarbonate, rapid homogenization and separation of animal and algal fractions, and analysis of metabolite labeling by gas chromatography-mass spectrometry. We …
Water Table Height And Microtopography Control Biogeochemical Cycling In An Arctic Coastal Tundra Ecosystem, David A. Lipson, Donatella Zona, Ted K. Raab, Francis Bozzolo, Marguerite Mauritz, Walter C. Oechel
Water Table Height And Microtopography Control Biogeochemical Cycling In An Arctic Coastal Tundra Ecosystem, David A. Lipson, Donatella Zona, Ted K. Raab, Francis Bozzolo, Marguerite Mauritz, Walter C. Oechel
Ted K. Raab
Drained thaw lake basins (DTLB’s) are the dominant land form of the Arctic Coastal Plain in northern Alaska. The presence of continuous permafrost prevents drainage and so water tables generally remain close to the soil surface, creating saturated, suboxic soil conditions. However, ice wedge polygons produce microtopographic variation in these landscapes, with raised areas such as polygon rims creating more oxic microenvironments. The peat soils in this ecosystem store large amounts of organic carbon which is vulnerable to loss as arctic regions continue to rapidly warm, and so there is great motivation to understand the controls over microbial activity in …
Reduction Of Iron (Iii) And Humic Substances Plays A Major Role In Anaerobic Respiration In An Arctic Peat Soil, David A. Lipson, Mony Jha, Ted K. Raab, Walter C. Oechel
Reduction Of Iron (Iii) And Humic Substances Plays A Major Role In Anaerobic Respiration In An Arctic Peat Soil, David A. Lipson, Mony Jha, Ted K. Raab, Walter C. Oechel
Ted K. Raab
Arctic peat soils contain vast reserves of organic C and are largely anaerobic. However, anaerobic respiration, particularly the role of Fe(III) and humic substances as electron acceptors, is not well understood in such ecosystems. We investigated these processes in a drained thaw lake basin on the Arctic coastal plain near Barrow, Alaska. We measured concentrations of soluble Fe and other potential electron acceptors, described the microbial community, and performed experiments in the laboratory and field to measure net rates of Fe(III) reduction and the relationship of this process to C cycling. In most areas within the basin, aerobic conditions existed …
The Coconut Palm, Cocos Nucifera, Impacts Forest Composition And Soil Characteristics At Palmyra Atoll, Central Pacific, Hillary S. Young, Ted K. Raab, Douglas J. Mccauley, Amy A. Briggs, Rodolfo Dirzo
The Coconut Palm, Cocos Nucifera, Impacts Forest Composition And Soil Characteristics At Palmyra Atoll, Central Pacific, Hillary S. Young, Ted K. Raab, Douglas J. Mccauley, Amy A. Briggs, Rodolfo Dirzo
Ted K. Raab
Cocos nucifera, the coconut palm, has a pantropical distribution and reaches near monodominance in many atolls, low lying islands and coastal regions. This paper examines the ecological correlation between C. nucifera abundance and changes in forest structure, floristic diversity and forest soil characteristics. Cumulatively, these data show that C. nucifera has important impacts on floristic, structural and soil characteristics of forests where it becomes dominant. Given the high proportion of tropical coastal areas in which C. nucifera is now naturalized and abundant, this likely has important implications for coastal forest diversity and structure.
Pmr6, A Pectate Lyase–Like Gene Required For Powdery Mildew Susceptibility In Arabidopsis, John P. Vogel, Ted K. Raab, Celine Schiff, Shauna C. Somerville
Pmr6, A Pectate Lyase–Like Gene Required For Powdery Mildew Susceptibility In Arabidopsis, John P. Vogel, Ted K. Raab, Celine Schiff, Shauna C. Somerville
Ted K. Raab
The plant genes required for the growth and reproduction of plant pathogens are largely unknown. In an effort to identify these genes, we isolated Arabidopsis mutants that do not support the normal growth of the powdery mildew pathogen Erysiphe cichoracearum. Here, we report on the cloning and characterization of one of these genes, PMR6. PMR6 encodes a pectate lyase-like protein with a novel C-terminal domain. Consistent with its predicted gene function, mutations in PMR6 alter the composition of the plant cell wall, as shown by Fourier transform infrared spectroscopy. pmr6-mediated resistance requires neither salicylic acid nor the ability to perceive …
Visualizing Rhizosphere Chemistry Of Legumes With Mid-Infrared Synchrotron Radiation, Ted K. Raab, Michael C. Martin
Visualizing Rhizosphere Chemistry Of Legumes With Mid-Infrared Synchrotron Radiation, Ted K. Raab, Michael C. Martin
Ted K. Raab
A bright synchrotron light source operated by the Lawrence Berkeley National Laboratory served as an external source for infrared (IR) microscopy of plant root microcosms. Mid-IR light from synchrotrons is 2-3 orders of magnitude brighter than conventional sources, providing contrast based on the chemical information in the reflected signal at a spatial resolution near the diffraction-limit of 3-10 microns. In an experiment using plant root microcosms fitted with zinc selenide IR-transmissive windows (50 mm x 20 mm x 1 mm), we describe chemical differences and similarities within the root zone of mung bean (Vigna radiata L.), grown with or without …
An Empirical Model Of Amino Acid Transformations In An Alpine Soil, David A. Lipson, Ted K. Raab, Steven K. Schmidt, Russ K. Monson
An Empirical Model Of Amino Acid Transformations In An Alpine Soil, David A. Lipson, Ted K. Raab, Steven K. Schmidt, Russ K. Monson
Ted K. Raab
Amino acids are potentially important nitrogen (N) sources for plants in many ecosystems. However, a quantitative understanding of organic N availability is lacking for most ecosystems. This study estimates seasonal amino acid fluxes in an alpine tundra soil using three independent data sets. In previous work in an alpine dry meadow ecosystem in the Front Range of the Colorado Rocky Mountains, we measured signifcant rates of amino acid production from soil peptides during the plant growing season. This suggested that proteolysis of native soil peptides could serve as a measure of amino acid availability to plants. Here we use a …
Effects Of Willows (Salix Brachycarpa) On Populations Of Salicylate-Mineralizing Microorganisms In Alpine Soils, Steven K. Schmidt, David A. Lipson, Ted K. Raab
Effects Of Willows (Salix Brachycarpa) On Populations Of Salicylate-Mineralizing Microorganisms In Alpine Soils, Steven K. Schmidt, David A. Lipson, Ted K. Raab
Ted K. Raab
We used the substrate-induced growth-response (SIGR) method to quantify salicylate-mineralizing microbes and total microbial biomass in soils from under willows (Salix brachycarpa) and in surrounding meadows dominated by the sedge Kobresia myosuroides. Willows had a strong effect on the biomass of salicylate-mineralizing microbes in both years of this study. There were always higher biomass levels of salicylate mineralizers in soils from under Salix (4.6–10.1 ug C/ g) than under Kobresia (0.23–0.76 ug/ g). In contrast, total microbial biomass was not significantly different under these plant species in 1996 and was only higher under Salix on one date in 1997. These …
Toward An Ecosystem Approach To Remediation In The Great Basin, Ted K. Raab
Toward An Ecosystem Approach To Remediation In The Great Basin, Ted K. Raab
Ted K. Raab
We consider the web of interactions among geologic materials, soils, plants, and animals to ask, "If mining or other extractive energy technologies occur in desert regions, what do we need to know to return the land to productivity?" The Great Basin represents a formidable challenge in this regard, as winters in these cold deserts and seasonal lack of moisture during parts of the year severely constrain the growing season for vegetation. Due to the nature of current or proposed mining activities in this region, we have chosen to concentrate on two potential pollutants: the trace element selenium (Se) and nitrate …
Soil Amino Acid Utilization Among Species Of The Cyperaceae: Plant And Soil Processes, Ted K. Raab, David A. Lipson, Steven K. Scmidt, Russ K. Monson
Soil Amino Acid Utilization Among Species Of The Cyperaceae: Plant And Soil Processes, Ted K. Raab, David A. Lipson, Steven K. Scmidt, Russ K. Monson
Ted K. Raab
Amino acids are released during the decomposition of soil organic matter and have been shown to be utilized as a nitrogen source by some non-mycorrhizal species in the family Cyperaceae (the sedge family). Twelve out of 13 Cyperaceae species examined in the current study were capable of absorbing soil amino acids in the non-mycorrhizal state. With two exceptions (two species in the genus Kobresia), species from subalpine or alpine habitats exhibited lower rates of total nitrogen uptake compared to species from more temperate habitats, which is possibly explained by lower growth rates in the alpine and subalpine species and a …
Variation In Competitive Abilities Of Plants And Microbes For Specific Amino Acids, David A. Lipson, Ted K. Raab, Steven K. Schmidt, Russ K. Monson
Variation In Competitive Abilities Of Plants And Microbes For Specific Amino Acids, David A. Lipson, Ted K. Raab, Steven K. Schmidt, Russ K. Monson
Ted K. Raab
Microbes are assumed to possess strong competitive advantages over plants for uptake of nutrients from the soil. The finding that non-mycorrhizal plants can obtain a significant fraction of their N requirement from soil amino acids contradicts this assumption. The amino acid glycine (Gly) has been used as a model amino acid in many recent studies. Our preliminary studies showed that Gly was a poor substrate for microbial growth compared to other amino acids. We tested the hypothesis that the alpine sedge Kobresia myosuroides competes better for Gly than for other amino acids because of decreased microbial demand for this compound. …
Non-Mycorrhizal Uptake Of Amino Acids By Roots Of The Alpine Sedge Kobresia Myosuroides: Implications For The Alpine Nitrogen Cycle, Ted K. Raab, David A. Lipson, Russ K. Monson
Non-Mycorrhizal Uptake Of Amino Acids By Roots Of The Alpine Sedge Kobresia Myosuroides: Implications For The Alpine Nitrogen Cycle, Ted K. Raab, David A. Lipson, Russ K. Monson
Ted K. Raab
Non-mycorrhizal plants of the alpine sedge, Kobresia myosuroides , take up the amino acid glycine from nutrient solutions at greater rates than NO3- or NH4+. The amino acids glutamate and proline were also taken up at high rates. Total plant biomass was twice as high after 4 months of growth on glycine, compared to NH4NO3, with significant increases in both root and leaf biomass. By taking advantage of differences in the d13C signature of air in the growth chamber and the glycine used for growth, a two-member mixing model was used to estimate that a significant amount of the glycine …