Life Sciences Commons^™

Investigation Of The Phenotypic Effect Of Mutating A Highly-Conserved Cysteine Residue In The Rna Polymerase Beta Prime Subunit Of E. Coli Rna Polymerase, Meg Dillingham

Mahurin Honors College Capstone Experience/Thesis Projects

All bacteria contain a multi-subunit RNA polymerase (RNAPs) that is essential for gene expression. Because of the centrality of these enzymes in cellular life, the structure and function of the various subunits is intensely studied. The primary sequence of the RNAP β’ subunit contains five cysteine residues that are highly conserved. Four of the cysteines coordinate a zinc atom and form the beta prime subunit zinc binding domain (ZBD). Mutation of any one of the ZBD cysteines is lethal to the cell. However, the role of the fifth residue (C58), which is located upstream of the ZBD cysteines, has not …

Bridging The Food Gap: Founding And Sustaining A Food Recovery Network Chapter At Wku, Elaine Losekamp

Mahurin Honors College Capstone Experience/Thesis Projects

Food waste is a pervasive global issue with many environmental and social repercussions. While about one-third of all food produced for human consumption goes to waste, many people in the United States and the world are affected by food insecurity. Food recovery, the process of rescuing edible food that would otherwise go to waste and delivering to hungry people, is an effective solution for both food waste and food insecurity. The author of this capstone created a food recovery program at Western Kentucky University (WKU) in January 2019 and has grown the program’s scope and impact since that time. This …

An Investigation On The Cover Preference Of The Mountain Madtom (Noturus Eleutherus), Mariah Slaughter

Mahurin Honors College Capstone Experience/Thesis Projects

Madtom catfish, members of the genus Noturus, are common in the waters of the Southeastern US. A previous study observed that madtoms in the Green River, Kentucky, preferred to shelter within old mussel shells compared to under or next to rocks. A laboratory study on the Carolina Madtom (Noturus furiosus), found that they did not utilize mussel shells and preferred rocks as cover. I conducted a similar laboratory study to determine which cover options the Mountain Madtoms (Noturus eleutherus) prefer. Cover preference was determined by offering the madtoms shelter options (rocks or mussel shells) in …

The Impact Of Exercise In Spaceflight And Microgravity Environments, William Bybee

Mahurin Honors College Capstone Experience/Thesis Projects

Since mankind’s first spaceflight, a significant barricade in reaching distant planets has been the damaging effects of microgravity upon the human body. Effects range from loss in bone mineral density and severe muscle atrophy to autoimmune disorders. The most effective countermeasure of these effects to date is exercise. Implementation of exercise in microgravity is not an easy task, so various specialized equipment must be utilized to effectively administer it. Even with this equipment, exercise as it is currently used does not entirely prevent body systems from undergoing detrimental changes. New modalities and implementations are currently being investigated that may significantly …

Impact Of Geographic Location And Social Determinants Of Health On Lung Cancer Incidence And Mortality Rates, Katherine Ashley

Mahurin Honors College Capstone Experience/Thesis Projects

This paper studies the effect of geographic location and socioeconomic status, specifically level of education and income, on rates of incidence and mortality of lung and bronchus cancer. While some prior studies have focused on socioeconomic status’ and global geographic location’s impact on these rates, few have focused on the impact in Appalachian Kentucky and non-Appalachian Kentucky. In this paper, level of education and income are controlled for using four variables: median household income, percentage of persons in poverty, percentage of high school graduates or higher who are at least 25, and percentage of persons with a bachelor’s degree or …

Morphological Correlates Of Auditory Sensitivity In The Inner Ear Of Two Species Of Invasive Carp, Tyler Patty

Mahurin Honors College Capstone Experience/Thesis Projects

Silver (Hypopthalmichthys molitrix) and bighead (H. nobilis) carp, are invasive species that have negative impacts upon ecosystems. H. molitrix is known to jump completely out of the water in response to broadband sounds, however, this is not observed in H. nobilis. Preliminary experiments reveal that sounds can be used to modify the behavior of carps. Thus, understanding the hearing abilities of these species is important in order to design appropriate acoustical deterrents. Fish heads were preserved in 4% paraformaldehyde and the inner ears dissected and photographed under a light microscope in order to describe the …

A Look At Gene Control: Tracking The Ccnd1 Gene, Bryan Anders

Mahurin Honors College Capstone Experience/Thesis Projects

Cancer occurs when the cell does not properly control its own cell cycle. It then replicates in an out of control fashion leading to the death of various organs and then the demise of the organism as a whole. As it seems to have always been a problem for cell-based life, certain safeguards against cancer have been evolved over time. One such method comes in the form of prevention via cyclin proteins, which are encoded from cyclin genes. The gene that is the focus of this research is the CCND1, or cyclin D1, gene that controls the progression through various …

Identifying Essential Viral Genes Through Genomic Engineering, Amber Carroll

Mahurin Honors College Capstone Experience/Thesis Projects

Bacteria developed resistance to penicillin a mere four years after the groundbreaking antibiotic was first mass produced (Casadevall, 2010). Since then, the development of antibiotic-resistant bacteria has steadily risen, causing millions of difficult to treat infections annually. The challenge is to identify ways to combat these menacing microbes. Bacteriophages are viruses that infect bacteria and can potentially be used to eliminate deadly antibiotic-resistant bacteria. The number of sequenced bacteriophage genomes has increased tremendously over the past 10 years, but little is known about the function of most bacteriophage genes. The purpose of this study was to expand our understanding of …

Ototoxicity Of Cisplatin, Pyriplatin, And Phenathriplatin In The Auditory Hybridoma Cell Line, Hei-Oc1, Alexandra Johnston

Mahurin Honors College Capstone Experience/Thesis Projects

Cisplatin is an anti-cancer drug which is effective against several cancers, but also causes harmful side-effects, including ototoxicity and hearing loss. While cisplatin is a bifunctional compound that forms coordinate covalent bonds with both strands of DNA, recently investigated monofunctional platinum(II) compounds bind to only one DNA strand, and may activate different cell-death mechanisms. As several monofunctional platinum(II) compounds have anti-cancer properties, but could target different cell-death pathways, they could potentially have different and reduced side-effects. In this study, the HEI-OC1 auditory hybridoma cell line was used to investigate the ototoxicity of cisplatin and two monofunctional platinum(II) compounds, phenanthriplatin and …

Landscape Genetics Of Salamander Populations At Mammoth Cave National Park, Jackson Resser

Mahurin Honors College Capstone Experience/Thesis Projects

Habitat connectivity affects the distribution of genetic diversity among populations by influencing the movements of individuals and the resulting pattern of gene flow across landscapes. It has become evident that amphibians are experiencing a period of worldwide population declines brought about by environmental change. An understanding of the effects of habitat structure on landscape connectivity is important for developing effective amphibian conservation strategies. The purpose of this study is to investigate the effect of landscape characteristics on gene flow and population structure of the marbled salamander (Ambystoma opacum) in Mammoth Cave National Park, Kentucky, USA. Salamander larvae were …

Assessing Biomass Fuel Consumption In Kasigau, Kenya As A Predictor Of Hypertension, Conner Hounshell

Mahurin Honors College Capstone Experience/Thesis Projects

Cardiovascular disease is the leading cause of death globally and disproportionately affects low- and middle-income countries, such as Kenya. Hypertension is the leading risk factor for cardiovascular disease and is influenced by a variety of factors such as diet, tobacco use, and genetics. One such factor linked to hypertension is exposure to air pollution, but minimal research exists on the effects of household air pollution. Hypertension that is not related to common Western risk indicators, such as waist-to-hip ratio, body mass indices, and hypercholestorlemia, is prevalent in the community of Kasigau, Kenya, along with the prevalence of risks for household …

Effects Of Supplemental Whole Cottonseed On Weaned Calf Production, Zachary Debord

Mahurin Honors College Capstone Experience/Thesis Projects

This study compared the effect of supplemental whole cottonseed in a weaned calf ration on cattle productivity. Feed is the main cost for livestock production. Whole cottonseed supplementation may increase production and reduce the cost of gain for the ration. During the study, 18 beef calves were weaned and split into two groups and fed, with and without WCS, for 50 days to determine the effect of supplemental whole cottonseed. Productivity was determined by measuring average daily gains for each group and comparing cost of gain for each ration. It was determined that WCS did increase productivity of weaned calves …

Using Unmanned Aircraft Systems To Identify Invasive Species, Tithe Ahmed

Mahurin Honors College Capstone Experience/Thesis Projects

Invasive species serve as a threat to native biodiversity and ecosystem sustainability. Combatting the spread of invasive species requires long-term physical and monetary commitments. In Balule Nature Reserve of Greater Kruger National Park, South Africa, Opuntia ficus-inidica (the common prickly pear) has been a relentless invader, displacing the local flora and fauna. The goal of this project is to battle invasive species such as prickly pear using efficient and inexpensive technology: unmanned aerial vehicles (UAVs or drones) and multispectral sensors.

Using a 4-bandwidth Parrot Sequoia multispectral sensor in tandem with the DJI Phantom Pro 3^TM UAV, images of land …

The Role Of Mitochondrial Pyruvate Carrier 1 (Mpc1) In Heart Failure And Its Implications For Cardiac Recovery, Obadiah Issachar Kirk

Mahurin Honors College Capstone Experience/Thesis Projects

Heart failure (HF) is a complex syndrome with high mortality rates around the world. HF also has diverse etiology as many things contribute such as hypertension, obesity, coronary artery disease, inflammation, and cardiac arrhythmias. Studies have shown that unloading of a failing heart with a left ventricular assist device (LVAD) can lead to cardiac recovery in a subpopulation of individuals with advanced HF. RNA-sequencing and protein expression analysis of myocardial tissue from HF patients who underwent the LVAD implant and heart transplant indicated that subpopulation of HF patients who responded to LVAD unloading had significantly lower levels of mitochondrial pyruvate …

Rodent Seed Preference Trials Of Ecologically Important Plants In Kentucky, Katelyn Thomason

Mahurin Honors College Capstone Experience/Thesis Projects

Seed predation is an important ecological process that can affect the success of individual plants and plant populations as a whole. However, seed preferences of herbivores have received little detailed attention in comparison to seedling predation studies (Hulme, 1994). In this project I researched how rodents, specifically their seed preferences, affect the recruitment and survival of ecologically important native plants in Western Kentucky. I used traps to catch Peromyscus leucopus (white-footed mice). Once caught, each mouse was placed in a trial arena with seeds from Silphium perfoliatum (cup plant), Baptisia australis (blue false indigo), Silphium lanciniatum (compass plant), and the …