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Full-Text Articles in Life Sciences

Diversity And Distribution Of Bryozoans Of The Northern To Central Rocky Outer Coast Of California, Ismael Chowdhury Jan 2023

Diversity And Distribution Of Bryozoans Of The Northern To Central Rocky Outer Coast Of California, Ismael Chowdhury

Cal Poly Humboldt theses and projects

The phylum Bryozoa is one of the most diverse groups of marine invertebrates, with a global distribution that spans marine and fresh waters. This study analyzes the Bryozoa in infralittoral communities on rocky surfaces from northern California (Point Saint George) to central California (Estero Bay), spanning 940 kilometers and encompassing 12 rocky intertidal sites. Although recent studies on bryozoan taxonomy and phylogeny have increased due to scanning electron microscopy (SEM) and high throughput sequencing, there is still a lack of studies on species found in shallow waters at intertidal depths, particularly in the northeastern Pacific. This study aims to expand …


Polymorphism Of Melanin-Based Pigments In Barn Owls In Winegrape Vineyards In Napa Valley, California, Laura Mariana Echávez Montenegro Jan 2023

Polymorphism Of Melanin-Based Pigments In Barn Owls In Winegrape Vineyards In Napa Valley, California, Laura Mariana Echávez Montenegro

Cal Poly Humboldt theses and projects

Many raptor species exhibit plumage polymorphism. Through the expression of a particular phenotype, polymorphism allows individuals to exploit alternative spatial or temporal environments and food resources most successfully. Barn Owls display within-species variation in their plumage, ranging from reddish to whitish and from heavily spotted to having no spots at all. In heterogeneous landscapes in Europe and the Middle East, reddish Common Barn Owls (Tyto alba) inhabit territories with proportionally more arable fields and consume proportionally more voles than mice in contrast to their whiter counterparts; a phenomenon known as habitat matching choice. This study sought to quantify …


Drought, Tree Mortality, And Regeneration In Northen California, Sophia Lb Lemmo Jan 2022

Drought, Tree Mortality, And Regeneration In Northen California, Sophia Lb Lemmo

Cal Poly Humboldt theses and projects

The 2012-2016 California drought was the most severe in the state’s recorded history, contributing to the death of millions of trees. While the effects of this drought on forests are relatively well studied in the central and southern Sierra Nevada, less is known about its effects on the heavily timbered and diverse forests of northern California. Through sampling 54 0.25 ha plots in northern California, this study compared tree mortality and regeneration patterns before, during, and after California’s most recent record-setting drought. This study evaluated 1) the influence of habitat and competitive covariates on mortality and regeneration trends using ridge …


Comparison Of Low-Cost Commercial Unpiloted Digital Aerial Photogrammetry To Airborne Laser Scanning Across Multiple Forest Types In California, James Edward Lamping Jan 2021

Comparison Of Low-Cost Commercial Unpiloted Digital Aerial Photogrammetry To Airborne Laser Scanning Across Multiple Forest Types In California, James Edward Lamping

Cal Poly Humboldt theses and projects

Science-based forest management requires quantitative information about forest attributes traditionally collected via sampled field plots in a forest inventory program. Remote sensing tools, such as active three-dimensional (3D) Light Detection and Ranging (lidar), are increasingly utilized to supplement and even replace field-based forest inventories. However, lidar remains cost prohibitive for smaller areas and repeat measurement, often limiting its use to single acquisitions of large contiguous areas. Recent advancements in unpiloted aerial systems (UAS), digital aerial photogrammetry (DAP) and high precision global positioning systems (HPGPS) have the potential to provide low-cost time and place flexible 3D data to support forest inventory …


The Politics Of Biomass Energy In California: How External Benefits Are Used To Support An Economically Marginal Sector, Dana L. Dysthe Jan 2021

The Politics Of Biomass Energy In California: How External Benefits Are Used To Support An Economically Marginal Sector, Dana L. Dysthe

Cal Poly Humboldt theses and projects

Since the 1990s, there has been a decline in biomass energy generation in California. In order to promote state governmental policies aiming to increase biomass energy generation in California, the sector has been linked to a series of external benefits that biomass energy purportedly brings. Through document analysis, semi-structured interviews, and participant observation, five distinct external benefits were identified that have been used to promote the biomass energy sector. These external benefits are: renewable energy generation, air quality improvements, promotion of forest restoration and fuel removal projects, disposal of wood waste from agricultural and forestry sectors, and rural economic development. …


Use Of Redwood Basal Hollows By Bats: A Focus On The Townsend's Big-Eared Bat On The North Coast Of California, Amon Jotesh Armstrong Jan 2021

Use Of Redwood Basal Hollows By Bats: A Focus On The Townsend's Big-Eared Bat On The North Coast Of California, Amon Jotesh Armstrong

Cal Poly Humboldt theses and projects

Loss of roosting resources, either through disturbance or removal, negatively affects bats. For sensitive species, such as the Townsend’s big-eared bat (Corynorhinus townsendii), determining roost requirements is a critical component in conserving their habitat. Such cavity roosting bats on the North Coast of California may use hollows in large redwood trees. In this study, I examined the factors determining the use of basal tree hollows by different bat species at eight redwood forest sites in Del Norte, Humboldt, and Mendocino Counties, California. Bat guano was collected from 179 basal hollow roosts from 2017 to 2018, and guano mass …


Phylogenetic And Population Genetic Analysis Of The Humboldt's Flying Squirrel Using High-Throughput Sequencing Data, Stella Chi Yuan Jan 2020

Phylogenetic And Population Genetic Analysis Of The Humboldt's Flying Squirrel Using High-Throughput Sequencing Data, Stella Chi Yuan

Cal Poly Humboldt theses and projects

The intraspecific genetic variation and diversity within the Humboldt’s flying squirrel (Glaucomys oregonensis) has not yet been characterized despite its elevation to full species in 2017. The San Bernardino flying squirrel (G. o. californicus) is thought to be the southernmost population of G. oregonensis and is restricted to the San Bernardino and San Jacinto Mountains in California, but recent surveys indicate they have been extirpated from the latter locality. In order to provide baseline genetic data across the geographic range of G. oregonensis, I had the following objectives: 1) investigate the intraspecific molecular variation in …


Evaluation Of Restoration Techniques And Management Practices Of Tule Pertaining To Eco-Cultural Use, Irene A. Vasquez Jan 2019

Evaluation Of Restoration Techniques And Management Practices Of Tule Pertaining To Eco-Cultural Use, Irene A. Vasquez

Cal Poly Humboldt theses and projects

Tule (Schoenoplectus sp.) is a native plant commonly used by California tribes and Indigenous people throughout the world (Macía & Balslev 2000). Ecological, social and regulatory threats to its use in contemporary Indigenous culture highlight major issues concerning natural resource management. My ancestral homeland, what is now Yosemite National Park, stands as a figurehead in the intersection of land management and Indigenous peoples. An important element of Traditional Ecological Management (TEM) for quality basketry materials is prescribed fire, an element western science is increasingly acknowledging for creating a more biodiverse and heterogeneous landscape. This research was conducted in Mariposa and …


A Time- And State-Based Approach To Estimate Winter Movement And Survival Of Juvenile Coho Salmon (Oncorhynchus Kisutch) In Freshwater Creek, California, Nicholas Paul Van Vleet Jan 2019

A Time- And State-Based Approach To Estimate Winter Movement And Survival Of Juvenile Coho Salmon (Oncorhynchus Kisutch) In Freshwater Creek, California, Nicholas Paul Van Vleet

Cal Poly Humboldt theses and projects

Accounting for life history diversity and overwinter survival of juvenile Coho Salmon is important to inform restoration and recovery efforts for this threatened species. Multiple seaward migration patterns of Coho Salmon have been identified, including spring fry migrants, fall and winter parr migrants, and spring smolt migrants. Previous studies have indicated that spring smolt migrants have low overwinter survival rates while they are rearing in upstream habitats, suggesting that freshwater overwinter survival may be one factor that limits smolt production. However, previous research did not account for the early emigration of fall and winter parr migrants from the study area, …


Competition, Climate, And Drought Effects On Tree Growth In An Encroached Oak Woodland In Northern California, Jill J. Beckmann Jan 2019

Competition, Climate, And Drought Effects On Tree Growth In An Encroached Oak Woodland In Northern California, Jill J. Beckmann

Cal Poly Humboldt theses and projects

Oregon white oak (Quercus garryana Douglas ex Hook.) is experiencing increasing competition from Douglas fir (Pseudotsuga menziesii (Mirb.) Franco) across its range at the same time as climate models are predicting increasing climate variability, including drought. Management recommendations that consider competition dynamics between these species under a changing climate are therefore needed for oak woodlands, but we do not currently understand the combined effects of competition, climate, and drought in this ecosystem. This research examines radial tree growth and drought response in Oregon white oak and Douglas fir in an encroached oak woodland near Kneeland, California. Stem maps …


Density And Distribution Of Piscivorous Fishes In The Sacramento – San Joaquin Delta, Christopher M. Loomis Jan 2019

Density And Distribution Of Piscivorous Fishes In The Sacramento – San Joaquin Delta, Christopher M. Loomis

Cal Poly Humboldt theses and projects

Predatory fishes, including numerous introduced species, are common to the Sacramento – San Joaquin Delta, but abundance data for most species is insufficient to determine the Delta-wide distribution and ecological impacts of these species. Predatory fishes (e.g. Striped Bass, Largemouth Bass have long been suspected of contributing to the decline of native species, including salmonids, but data has been insufficient to investigate this hypothesis. In this study, I present a novel method to assess predator fish populations across the southern Delta using DIDSON acoustic cameras and analyze the environmental associations that form the landscape and fine-scale distribution of predatory fishes. …


Overwinter Survival And Movement Of Juvenile Coho Salmon (Oncorhynchus Kisutch) In Relation To Large Woody Debris And Low-Velocity Habitat In Northern California Streams, John D. Deibner-Hanson Jan 2019

Overwinter Survival And Movement Of Juvenile Coho Salmon (Oncorhynchus Kisutch) In Relation To Large Woody Debris And Low-Velocity Habitat In Northern California Streams, John D. Deibner-Hanson

Cal Poly Humboldt theses and projects

Some studies suggest that Coho Salmon populations are limited by overwinter survival as a result of insufficient winter habitat. While many small-scale projects aim to define reach and basin-level habitat requirements for Coho Salmon, large-scale studies that assess multiple independent populations remain few. For my research, I quantified large woody debris (LWD) by volume and low-velocity rearing habitat (LVH) as percent area in three coastal watersheds of similar size in northern California to untangle the relationships between Coho Salmon overwinter survival, emigration timing and specific winter habitats. I used mark-recapture techniques with PIT tags to formulate Cormack-Jolly-Seber models for each …


Drought And Coyotes Mediate The Relationship Between Mesopredators And Human Disturbance In California, Molly K. Parren Jan 2019

Drought And Coyotes Mediate The Relationship Between Mesopredators And Human Disturbance In California, Molly K. Parren

Cal Poly Humboldt theses and projects

Mesopredators in California are facing two major changes to their ecosystem: drought and the expansion of human disturbance. As a result, mesopredators are likely shifting their habitat use as well as their interspecies interactions to balance resource needs and risk-taking on the landscape. In response to severe drought, the California Department of Fish and Wildlife deployed 585 camera traps throughout the Mojave Desert and Central Valley documenting mammalian mesopredator presence in a drought year (2016) and a post-drought year (2017). The objectives of this study were to examine spatial patterns of mesopredator occurrence and co-occurrence with a dominant predator, the …


Rangewide Tidewater Goby Occupancy Survey Using Environmental Dna, Michael Sutter Jan 2018

Rangewide Tidewater Goby Occupancy Survey Using Environmental Dna, Michael Sutter

Cal Poly Humboldt theses and projects

Rangewide monitoring of fish species is critical for determining status and trends in abundance and distribution; however, implementations of large-scale distribution surveys have generally been constrained by time and cost. This study uses environmental DNA (eDNA) to monitor the presence or absence of two endangered tidewater goby species, the northern tidewater goby (Eucyclogobius newberryi) and the southern tidewater goby (Eucyclogobius kristinae), across their combined geographic range that encompasses the entire California coast (1,350 km).A multi-scale occupancy model designed specifically for eDNA methods was used to account for imperfect detection and to estimate true site occupancy. A …


Hunting Habitat Use And Selection Patterns Of Barn Owl (Tyto Alba) In The Urban-Agricultural Setting Of A Prominent Wine Grape Growing Region Of California, Xeronimo A. Castaneda Jan 2018

Hunting Habitat Use And Selection Patterns Of Barn Owl (Tyto Alba) In The Urban-Agricultural Setting Of A Prominent Wine Grape Growing Region Of California, Xeronimo A. Castaneda

Cal Poly Humboldt theses and projects

Large scale conversion of uncultivated land to agriculture threatens wildlife and can diminish ecosystem services provided by nature. Understanding how wildlife provision ecosystem services may incentivize wildlife conservation in agricultural landscapes. Attracting barn owls (Tyto alba) to nest on farms for pest management has been documented worldwide, but has not been thoroughly evaluated in vineyard agroecosystems. Napa Valley, California is a renowned winegrape growing region, and viticulturists encourage barn owl occupancy to help minimize plant damage from pocket gophers (Thomomys bottae) and voles (Microtus spp.). This study aimed to establish a basis for revealing the …


The Bee Fauna Of The Horse Mountain And Grouse Mountain Region, Humboldt County, California, Carrie Lopez Jan 2017

The Bee Fauna Of The Horse Mountain And Grouse Mountain Region, Humboldt County, California, Carrie Lopez

Cal Poly Humboldt theses and projects

Recent concerns about the ecological well-being of bee communities in California and elsewhere have increased the need for monitoring programs and studies that evaluate the impact of habitat loss and alteration on bee diversity and abundance. Such studies depend critically on the expertise of people trained in taxonomy, but their numbers have declined in recent years. My primary goal was to gain a comprehensive first-hand experience with bee identification by documenting the fauna of a previously unstudied area in the mountains of northwestern California and by writing an identification key, intended for dedicated non-specialists, to the area’s 35 species of …


Seasonal Habitat Selection Of The North American Porcupine (Erethizon Dorsatum) In A Coastal Dune Forest, Cara L. Appel Jan 2016

Seasonal Habitat Selection Of The North American Porcupine (Erethizon Dorsatum) In A Coastal Dune Forest, Cara L. Appel

Cal Poly Humboldt theses and projects

Wildlife-habitat relationship studies are important for understanding the factors that determine where species occur in space and time. Habitat selection by generalist species should be studied on fine spatial and temporal scales to avoid masking important differences between seasons, localities, or orders of selection. I conducted the first study of habitat use and general ecology of North American porcupines (Erethizon dorsatum) in a coastal dune environment. Specifically, I assessed changes in body mass, home range size, and habitat selection in relation to the potential for seasonal nutritional and survival bottlenecks as reported elsewhere. Although they are considered generalists, …


Early Seral Mixed-Conifer Forest Structure And Composition Following A Wildfire Reburn In The Sierra Nevada, Erin Alvey Jan 2016

Early Seral Mixed-Conifer Forest Structure And Composition Following A Wildfire Reburn In The Sierra Nevada, Erin Alvey

Cal Poly Humboldt theses and projects

Before the era of modern fire suppression, California’s northern Sierra Nevada mixed-conifer and yellow pine forests were self-regulating; recurring short-interval, low-mixed severity wildfires maintained forest structure and composition, which in turn exerted bottom-up controls on subsequent wildfires. As a result of fire suppression, and coupled with the effects of climate warming and other anthropogenic disturbances, the fundamental structure of mixed-conifer and yellow pine forests has shifted. Wildfires may now be increasing in size, severity, and frequency across western North America. However, little is known about the post-fire impacts of repeat wildfire on a forest after a long era of suppression. …