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Full-Text Articles in Life Sciences

Synthesis Of Phylogeny And Taxonomy Into A Comprehensive Tree Of Life, Cody E. Hinchliff, Stephen A. Smith, James F. Allman, J. Gordon Burleigh, Ruchi Chaudhary, Lyndon M. Coghill, Keith A. Crandall, Jiabin Deng, Bryan T. Drew, Romina Gazis, Karl Gude, David S. Hibbett, Laura A. Katz, H. Dail Laughinghouse Iv, Emily Jane Mctavish, Peter E. Midford, Christopher L. Owen, Richard H. Ree, Jonathan A. Rees, Douglas E. Soltis, Tiffani Williams, Karen A. Cranston Oct 2015

Synthesis Of Phylogeny And Taxonomy Into A Comprehensive Tree Of Life, Cody E. Hinchliff, Stephen A. Smith, James F. Allman, J. Gordon Burleigh, Ruchi Chaudhary, Lyndon M. Coghill, Keith A. Crandall, Jiabin Deng, Bryan T. Drew, Romina Gazis, Karl Gude, David S. Hibbett, Laura A. Katz, H. Dail Laughinghouse Iv, Emily Jane Mctavish, Peter E. Midford, Christopher L. Owen, Richard H. Ree, Jonathan A. Rees, Douglas E. Soltis, Tiffani Williams, Karen A. Cranston

Biological Sciences: Faculty Publications

Reconstructing the phylogenetic relationships that unite all line- ages (the tree of life) is a grand challenge. The paucity of homologous character data across disparately related lineages currently renders direct phylogenetic inference untenable. To reconstruct a comprehensive tree of life, we therefore synthesized published phylogenies, together with taxonomic classifications for taxa never incorporated into a phylogeny. We present a draft tree containing 2.3 million tips— the Open Tree of Life. Realization of this tree required the assembly of two additional community resources: (i) a comprehensive global reference taxonomy and (ii) a database of published phylogenetic trees mapped to this taxonomy. …


Homogenization Of Forest Plant Communities And Weakening Of Species-Environment Relationships Via Agricultural Land Use, Mark Vellend, Kris Verheyen, Kathryn M. Flinn, Hans Jacquemyn, Annette Kolb, Hans Van Calster, George Peterken, Bente Jessen Graae, Jesse Bellemare, Olivier Honnay, Jörg Brunet, Monika Wulf, Fritz Gerhardt, Martin Hermy May 2007

Homogenization Of Forest Plant Communities And Weakening Of Species-Environment Relationships Via Agricultural Land Use, Mark Vellend, Kris Verheyen, Kathryn M. Flinn, Hans Jacquemyn, Annette Kolb, Hans Van Calster, George Peterken, Bente Jessen Graae, Jesse Bellemare, Olivier Honnay, Jörg Brunet, Monika Wulf, Fritz Gerhardt, Martin Hermy

Biological Sciences: Faculty Publications

Disturbance may cause community composition across sites to become more or less homogenous, depending on the importance of different processes involved in community assembly. In north-eastern North America and Europe local (alpha) diversity of forest plants is lower in forests growing on former agricultural fields (recent forests) than in older (ancient) forests, but little is known about the influence of land-use history on the degree of compositional differentiation among sites (beta diversity). Here we analyse data from 1446 sites in ancient and recent forests across 11 different landscapes in north-eastern North America and Europe to demonstrate decreases in beta diversity …