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Virginia Commonwealth University

2016

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Articles 1 - 30 of 112

Full-Text Articles in Life Sciences

Patient-Specific Inference Of Average Glucose From Glycated Hemoglobin, Roy Malka, David M. Nathan, John M. Higgins May 2016

Patient-Specific Inference Of Average Glucose From Glycated Hemoglobin, Roy Malka, David M. Nathan, John M. Higgins

Biology and Medicine Through Mathematics Conference

No abstract provided.


Symmetries Constrain Dynamics In A Family Of Balanced Neural Networks, Andrea Barreiro, J Nathan Kutz, Eli Shlizerman May 2016

Symmetries Constrain Dynamics In A Family Of Balanced Neural Networks, Andrea Barreiro, J Nathan Kutz, Eli Shlizerman

Biology and Medicine Through Mathematics Conference

No abstract provided.


A Multi-Level Model Of Synergistic T Cell Activation, Anna Konstorum, Anthony Vella, Reinhard C. Laubenbacher May 2016

A Multi-Level Model Of Synergistic T Cell Activation, Anna Konstorum, Anthony Vella, Reinhard C. Laubenbacher

Biology and Medicine Through Mathematics Conference

No abstract provided.


Anticipating Elimination Of Mosquito-Borne Diseases, Suzanne M. O'Regan, Jonathan Lillie, John M. Drake May 2016

Anticipating Elimination Of Mosquito-Borne Diseases, Suzanne M. O'Regan, Jonathan Lillie, John M. Drake

Biology and Medicine Through Mathematics Conference

No abstract provided.


Mathematical Models Of Biofilm For Antimicrobial Persistence, Jia Zhao May 2016

Mathematical Models Of Biofilm For Antimicrobial Persistence, Jia Zhao

Biology and Medicine Through Mathematics Conference

No abstract provided.


The Influence Of Temperature Variation On Dengue Fever: A Model-Based Investigation, Michael A. Robert, Paula D. Weber, Rebecca C. Christofferson, Christopher N. Mores, Helen J. Wearing May 2016

The Influence Of Temperature Variation On Dengue Fever: A Model-Based Investigation, Michael A. Robert, Paula D. Weber, Rebecca C. Christofferson, Christopher N. Mores, Helen J. Wearing

Biology and Medicine Through Mathematics Conference

No abstract provided.


Toward Adaptive Control Of Acute Inflammation, Judy D. Day, Seddik M. Djouadi, Ouassim Bara, Gregory L. Zitelli May 2016

Toward Adaptive Control Of Acute Inflammation, Judy D. Day, Seddik M. Djouadi, Ouassim Bara, Gregory L. Zitelli

Biology and Medicine Through Mathematics Conference

No abstract provided.


Homeolog Specific Expression Bias, Ronald D. Smith May 2016

Homeolog Specific Expression Bias, Ronald D. Smith

Biology and Medicine Through Mathematics Conference

No abstract provided.


Mathematical Modeling Of Endotoxin-Induced Inflammation In Young Men, Renee Brady May 2016

Mathematical Modeling Of Endotoxin-Induced Inflammation In Young Men, Renee Brady

Biology and Medicine Through Mathematics Conference

No abstract provided.


Hill's Diagrammatic Method And Reduced Graph Powers, Gregory D. Smith, Richard Hammack May 2016

Hill's Diagrammatic Method And Reduced Graph Powers, Gregory D. Smith, Richard Hammack

Biology and Medicine Through Mathematics Conference

No abstract provided.


Dynamics Of Two Pathogens In A Single Tick Population, Alexis White May 2016

Dynamics Of Two Pathogens In A Single Tick Population, Alexis White

Biology and Medicine Through Mathematics Conference

No abstract provided.


Mathematical Models Of Hiv And Hpv Coinfection, Samantha Erwin, Meghna Verma, Vida Abedi, Raquel Hontecillas-Magarzo, Stefan Hoops, Josep Bassaganya-Riera, Stanca M. Ciupe May 2016

Mathematical Models Of Hiv And Hpv Coinfection, Samantha Erwin, Meghna Verma, Vida Abedi, Raquel Hontecillas-Magarzo, Stefan Hoops, Josep Bassaganya-Riera, Stanca M. Ciupe

Biology and Medicine Through Mathematics Conference

No abstract provided.


Modelling The Polarization, Migration And Neuromast Deposition In The Zebrafish Posterior Lateral Line System, Hildur Knutsdottir May 2016

Modelling The Polarization, Migration And Neuromast Deposition In The Zebrafish Posterior Lateral Line System, Hildur Knutsdottir

Biology and Medicine Through Mathematics Conference

No abstract provided.


Growth Dynamics For Pomacea Maculata, Lihong Zhao, Karyn L. Sutton, Jacoby Carter May 2016

Growth Dynamics For Pomacea Maculata, Lihong Zhao, Karyn L. Sutton, Jacoby Carter

Biology and Medicine Through Mathematics Conference

No abstract provided.


Spatial Patterning In The York River Tidal Marshes Through The Interaction Of Cordgrass, Mussels And Sediment, Sofya Zaytseva, Leah Shaw, Rom Lipcius, Junping Shi May 2016

Spatial Patterning In The York River Tidal Marshes Through The Interaction Of Cordgrass, Mussels And Sediment, Sofya Zaytseva, Leah Shaw, Rom Lipcius, Junping Shi

Biology and Medicine Through Mathematics Conference

No abstract provided.


Investigations Of The Effects Of Different Ventilation Structures On Physiologically Based Pharmacokinetic Modeling (Pbpk) Simulations, Karen A. Yokley May 2016

Investigations Of The Effects Of Different Ventilation Structures On Physiologically Based Pharmacokinetic Modeling (Pbpk) Simulations, Karen A. Yokley

Biology and Medicine Through Mathematics Conference

No abstract provided.


Explicitly Separating Growth And Motility In A Glioblastoma Tumor Model, Tracy Stepien, Erica Rutter, Meng Fan, Yang Kuang May 2016

Explicitly Separating Growth And Motility In A Glioblastoma Tumor Model, Tracy Stepien, Erica Rutter, Meng Fan, Yang Kuang

Biology and Medicine Through Mathematics Conference

No abstract provided.


Needle In The Haystack: Combining Intravital Imaging And Mathematical Modeling To Understand How Vaccine-Induced T Cells Find Malaria-Infected Cells In Murine Livers, Vitaly V. Ganusov, Ian Cockburn, Reka Kelemen May 2016

Needle In The Haystack: Combining Intravital Imaging And Mathematical Modeling To Understand How Vaccine-Induced T Cells Find Malaria-Infected Cells In Murine Livers, Vitaly V. Ganusov, Ian Cockburn, Reka Kelemen

Biology and Medicine Through Mathematics Conference

No abstract provided.


Force Generation And Contraction Of Random Actomyosin Bundles., Dietmar B. Oelz May 2016

Force Generation And Contraction Of Random Actomyosin Bundles., Dietmar B. Oelz

Biology and Medicine Through Mathematics Conference

No abstract provided.


Modeling Tracheal Occlusion In The Embryonic Lung, Uduak George May 2016

Modeling Tracheal Occlusion In The Embryonic Lung, Uduak George

Biology and Medicine Through Mathematics Conference

No abstract provided.


Movement And Dynamics Of Norway Rats In An Urban Landscape, Rosalyn Rael, Caz Taylor May 2016

Movement And Dynamics Of Norway Rats In An Urban Landscape, Rosalyn Rael, Caz Taylor

Biology and Medicine Through Mathematics Conference

No abstract provided.


Wilson-Cowan Coupled Dynamics In A Model Of The Cortico-Striato-Thalamo-Cortical Circuit, Anca R. Radulescu May 2016

Wilson-Cowan Coupled Dynamics In A Model Of The Cortico-Striato-Thalamo-Cortical Circuit, Anca R. Radulescu

Biology and Medicine Through Mathematics Conference

No abstract provided.


A Theoretical Model Of The Increase In Venous Oxygen Saturation Levels In Advanced Glaucoma Patients, Julia C. Arciero May 2016

A Theoretical Model Of The Increase In Venous Oxygen Saturation Levels In Advanced Glaucoma Patients, Julia C. Arciero

Biology and Medicine Through Mathematics Conference

No abstract provided.


Grunt Variation In The Oyster Toadfish Opsanus Tau: Effect Of Size And Sex, Michael L. Fine, Tyler D. Waybright Jan 2016

Grunt Variation In The Oyster Toadfish Opsanus Tau: Effect Of Size And Sex, Michael L. Fine, Tyler D. Waybright

Biology Publications

As in insects, frogs and birds, vocal activity in fishes tends to be more developed in males than in females, and sonic swimbladder muscles may be sexually dimorphic, i.e., either larger in males or present only in males. Male oyster toadfish Opsanus tau L produce a long duration, tonal boatwhistle advertisement call, and both sexes grunt, a short duration more pulsatile agonistic call. Sonic muscles are present in both sexes but larger in males. We tested the hypothesis that males would call more than females by inducing grunts in toadfish of various sizes held in a net and determined incidence …


Single-Locus Versus Multilocus Patterns Of Local Adaptation To Climate In Eastern White Pine (Pinus Strobus, Pinaceae), Om P. Rajora, Andrew J. Eckert, John W. R. Zinck Jan 2016

Single-Locus Versus Multilocus Patterns Of Local Adaptation To Climate In Eastern White Pine (Pinus Strobus, Pinaceae), Om P. Rajora, Andrew J. Eckert, John W. R. Zinck

Biology Publications

Natural plant populations are often adapted to their local climate and environmental conditions, and populations of forest trees offer some of the best examples of this pattern. However, little empirical work has focused on the relative contribution of single-locus versus multilocus effects to the genetic architecture of local adaptation in plants/forest trees. Here, we employ eastern white pine (Pinus strobus) to test the hypothesis that it is the inter-genic effects that primarily drive climate-induced local adaptation. The genetic structure of 29 range-wide natural populations of eastern white pine was determined in relation to local climatic factors using both …


Planar Cell Polarity Genes Frizzled3a, Vangl2, And Scribble Are Required For Spinal Commissural Axon Guidance, Simon D. Sun, Ashley M. Purdy, Gregory S. Walsh Jan 2016

Planar Cell Polarity Genes Frizzled3a, Vangl2, And Scribble Are Required For Spinal Commissural Axon Guidance, Simon D. Sun, Ashley M. Purdy, Gregory S. Walsh

Biology Publications

Background

A fundamental feature of early nervous system development is the guidance of axonal projections to their targets in order to assemble neural circuits that control behavior. Spinal commissural neurons are an attractive model to investigate the multiple guidance cues that control growth cone navigation both pre- and post-midline crossing, as well as along both the dorsal–ventral (D–V) and anterior–posterior (A–P) axes. Accumulating evidence suggests that guidance of spinal commissural axons along the A–P axis is dependent on components of the planar cell polarity (PCP) signaling pathway. In the zebrafish, the earliest born spinal commissural neuron to navigate the midline …


Cadherin-2 Is Required Cell Autonomously For Collective Migration Of Facial Branchiomotor Neurons, Jane K. Rebman, Kathryn E. Kirchoff, Gregory S. Walsh Jan 2016

Cadherin-2 Is Required Cell Autonomously For Collective Migration Of Facial Branchiomotor Neurons, Jane K. Rebman, Kathryn E. Kirchoff, Gregory S. Walsh

Biology Publications

Collective migration depends on cell-cell interactions between neighbors that contribute to their overall directionality, yet the mechanisms that control the coordinated migration of neurons remains to be elucidated. During hindbrain development, facial branchiomotor neurons (FBMNs) undergo a stereotypic tangential caudal migration from their place of birth in rhombomere (r)4 to their final location in r6/7. FBMNs engage in collective cell migration that depends on neuron-to-neuron interactions to facilitate caudal directionality. Here, we demonstrate that Cadherin-2-mediated neuron-to-neuron adhesion is necessary for directional and collective migration of FBMNs. We generated stable transgenic zebrafish expressing dominant-negative Cadherin-2 (Cdh2ΔEC) driven by the islet1 promoter. …


In Silico Identification Of Essential Proteins In Corynebacterium Pseudotuberculosis Based On Protein-Protein Interaction Networks, Edson Luiz Folador, Paulo Vinícius Sanches Daltro De Carvalho, Wanderson Marques Silva, Rafaela Salgado Ferreira, Artur Silva, Michael Gromiha, Preetam Ghosh, Debmalya Barh, Vasco Azevedo, Richard Röttger Jan 2016

In Silico Identification Of Essential Proteins In Corynebacterium Pseudotuberculosis Based On Protein-Protein Interaction Networks, Edson Luiz Folador, Paulo Vinícius Sanches Daltro De Carvalho, Wanderson Marques Silva, Rafaela Salgado Ferreira, Artur Silva, Michael Gromiha, Preetam Ghosh, Debmalya Barh, Vasco Azevedo, Richard Röttger

Biology Publications

Background

Corynebacterium pseudotuberculosis (Cp) is a gram-positive bacterium that is classified into equi and ovis serovars. The serovar ovis is the etiological agent of caseous lymphadenitis, a chronic infection affecting sheep and goats, causing economic losses due to carcass condemnation and decreased production of meat, wool, and milk. Current diagnosis or treatment protocols are not fully effective and, thus, require further research of Cp pathogenesis.

Results

Here, we mapped known protein-protein interactions (PPI) from various species to nine Cp strains to reconstruct parts of the potential Cp interactome and to identify potentially essential proteins serving as putative drug …


Characterization Of Current And Historical Variations In Sediment Accretion And Carbon Dynamics At The Rice Rivers Center Kimages Creek Wetland Restoration, Melissa J. Davis, Christopher D. Gatens, Edward R. Crawford, Arif Sikder Jan 2016

Characterization Of Current And Historical Variations In Sediment Accretion And Carbon Dynamics At The Rice Rivers Center Kimages Creek Wetland Restoration, Melissa J. Davis, Christopher D. Gatens, Edward R. Crawford, Arif Sikder

Rice Rivers Center Research Symposium

Current research of freshwater wetland soils have assessed and reported smaller stocks of soil organic carbon in restored wetlands compared to reference natural wetlands. However, a majority of these studies focus on sites restored from agricultural draining of non-tidal depressional wetlands,whereas carbon and accretion dynamics in tidal freshwater wetlands restored via dam removal is poorly understood. The U.S. Army Corps of Engineers estimates over 80,000 dams greater than 6 feet and tens of thousands of smaller dams pepper the U.S., of which the majority are unsafe, old or no longer serve their intended purpose. Damming disrupts the natural flow of …


An Analysis Of Particulate Matter In Central Virginia, Elizabeth Garrett, Arif Sikder Jan 2016

An Analysis Of Particulate Matter In Central Virginia, Elizabeth Garrett, Arif Sikder

Rice Rivers Center Research Symposium

Virginia is consistently rated as a state with high rates of asthma (Asthma and Allergy Foundation 2014). Although this respiratory disease has many causes, certain air pollutants can be a trigger. The EPA currently identifies, monitors, and regulates seven types of air pollutants. One of these pollutants, particulate matter, can occur both naturally and culturally. The primary anthropogenic cause of particulate matter is fly ash, which is formed during fossil fuel combustion. Different technology installed in the power plant can capture some of the fly ash but these methods are not entirely effective.

This study focused on estimating the ratio …