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Full-Text Articles in Life Sciences

Alfanet: A Database Of Alfalfa-Bacterial Stem Blight Protein–Protein Interactions Revealing The Molecular Features Of The Disease-Causing Bacteria, Raghav Kataria, Rakesh Kaundal Aug 2021

Alfanet: A Database Of Alfalfa-Bacterial Stem Blight Protein–Protein Interactions Revealing The Molecular Features Of The Disease-Causing Bacteria, Raghav Kataria, Rakesh Kaundal

Plants, Soils and Climate Student Research

Alfalfa has emerged as one of the most important forage crops, owing to its wide adaptation and high biomass production worldwide. In the last decade, the emergence of bacterial stem blight (caused by Pseudomonas syringae pv. syringae ALF3) in alfalfa has caused around 50% yield losses in the United States. Studies are being conducted to decipher the roles of the key genes and pathways regulating the disease, but due to the sparse knowledge about the infection mechanisms of Pseudomonas, the development of resistant cultivars is hampered. The database alfaNET is an attempt to assist researchers by providing comprehensive Pseudomonas proteome …


Seeding Rate, Herbicide, And Irrigation Effects On Spring-Seeded Oat-Alfalfa Companion Crops, Carson D. Roberts May 2021

Seeding Rate, Herbicide, And Irrigation Effects On Spring-Seeded Oat-Alfalfa Companion Crops, Carson D. Roberts

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Small grain companion crop seeding rate recommendations for alfalfa (Medicago sativa L.) establishment are dated and inconsistent, and how a small grain companion crop seeding rates should be adjusted at different moisture levels is unknown. A study was conducted to provide clarity about oat (Avena sativa L.) companion crop seeding rates that maximize weed suppression and forage yield and minimize the effect on alfalfa stand establishment. This experiment considered oat companion crop seeding rates at various irrigation levels. Companion crop treatments consisted of oats sown at 89, 45, 22, 10, and 0 (with and without herbicide) kg ha …


Innovative Water Management Using Advanced Irrigation Systems And Biochar, Jonathan A. Holt May 2021

Innovative Water Management Using Advanced Irrigation Systems And Biochar, Jonathan A. Holt

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Two approaches to water optimization in agriculture are to increase soil water retention and improve the efficiency of irrigation. A soil amendment that has received attention for its ability to increase soil water retention is biochar, the remaining biomass after high C materials have been pyrolyzed (burned with limited oxygen and heat). Two studies were conducted at a total of 10 site-years in Utah from 2018 to 2020 to evaluate how wood biochar influences the productivity and crop quality of irrigated alfalfa (Medicago Sativa L.), corn (Zea mays L.), and wheat (Triticum L.), along with soil water tension. One study …


Translating -Omics Big Data: Comprehensive Understanding Of Host-Pathogen Interactions To Control Bacterial Blight In Alfalfa Using Computational Approaches, Raghav Kataria Apr 2021

Translating -Omics Big Data: Comprehensive Understanding Of Host-Pathogen Interactions To Control Bacterial Blight In Alfalfa Using Computational Approaches, Raghav Kataria

Student Research Symposium

Plant infectious diseases are a major threat to the crops, owing to economic losses to the agriculture industry worldwide. Molecular interactions between the host and pathogen play a critical role in understanding the basis of pathogenesis. Majority of the Pseudomonas syringae strains are known to cause frost injury in plants, amongst which, P. syringae pv. syringae ALF3 is asserted to be a causal organism of bacterial stem blight in Medicago sativa (alfalfa). We elucidated the genome-scale host-pathogen interactions (HPIs) between alfalfa and P. syringae using two intense computational approaches: interolog (homology-based) and the domain-based method (based on 3D structure of …