Life Sciences Commons^™

Anthropogenic Change On The Distribution Of Marine Megafauna And Their Prey, Baylie Fadool

Honors Theses

Anthropogenic change is impacting the distribution and survival of marine megafauna and their prey. Humans are changing every aspect of the marine environment, with effects reaching as large as changing the composition of marine environments to directly overexploiting species through the fishing industry. The role that marine megafauna play in balancing ecosystems, including as top apex predators, leads to detrimental results in the absences and population declines of these species. Migrations and declines due to threats on marine apex predator species will alter their environments by causing mesopredator release and changes in community structure, which is often associated with reduced …

Inheritability Of Ciprofloxacin-Induced Mitochondrial Mutations From Parental To Offspring Generation Using Quantitative Polymerase Chain Reaction, Rose Mccoy

Honors Theses

In all eukaryotes, mitochondria are known as the powerhouse of the cell (Siekevitz, 1957). In plants, however, their mitochondrial genome is especially strange. Plant mitochondrial genomes are extremely large and contain both linear and circular subgenomic DNA fragments. Plant mitochondrial genomes undergo a significant amount of mutations in the form of rearrangements. However, it is not known how often these rearrangements are inherited by the next generation. It is thought that plant cells that are still dividing have higher rates of DNA repair, such as double-strand break repair, to ensure the quality of that plant lineage. As follows, it is …

Diatom Morphology In Light Of A Changing Climate: A Focus On Aulacoseira Crenulata, Brighid Welchans

Honors Theses

Fossilized diatoms are arguably the most vital proxy record utilized in paleolimnology. Diatoms are unicellular microalgae that are the basis of countless food webs, are invaluable bioindicators, and generate nearly a quarter of global net primary productivity. Diatoms are affected by a variety of environmental factors but there is relatively little research on how environmental conditions impact diatom valve morphology, and in particular whether there is a correlation between incoming light and diatom pore morphology. This report focuses on the Amazon lowland lake Garzacocha, and analyzes the relationship between light levels and the corresponding size of Aulacoseira crenulata pores. We …

A Qualitative Analysis Of The Barriers Faced By Nursing Assistants And Medication Aides In The Care Of Dysphagia Residents, Lauren Kreuzberg

Honors Theses

Dysphagia refers to the symptom of difficulty in swallowing that accompanies several prevalent conditions in the older adult population, including amyotrophic lateral sclerosis (ALS, Lou Gehrig’s Disease), stroke, Parkinson’s Disease, Multiple Sclerosis, dementia, various cancers, and brain tumors (Allari, 2014). Many older adults who suffer from these conditions reside in nursing facilities, where most of their care is provided by certified nursing assistants (CNAs) and medication aides (MAs). However, the extent of these workers’ knowledge and competence in providing care to nursing home residents with dysphagia is vastly under-researched. The qualitative analysis investigates themes among interviews with fifteen CNAs and …

Characterization Of A Split-Nluc Assay For Monitoring Changes In Alpha-Synuclein Solubility In Living Cells, Baolong Truong

Honors Theses

Alpha-synuclein is the primary constituent of Lewy Bodies, protein aggregates associated with Parkinson’s Disease, Dementia with Lewy Bodies, and Multiple Systems Dystrophy. Given the terminal nature of these synucleinopathies, the need for an assay that can report on alpha-synuclein aggregation levels in living systems is critical. Western blotting represents one potential approach to this problem; however, this technique can often be limited by selectivity of available antibodies and experimental reproducibility. Herein, we describe a novel luminescence-based assay capable of detecting alpha-synuclein solubility in bacterial cells. This platform can report on the influence of disease-relevant mutations and small molecules. Antibodies are …

An Analysis Of Social Dominance In The Feeding Of Ex Situ Humboldt Penguins (Spheniscus Humboldti), Robert Gabel

Honors Theses

In the field of ecology, complex social structures, including dominance hierarchies, have been demonstrated in a variety of fauna, including bird species. While wild Humboldt Penguins (Spheniscus humboldti) do not exhibit a feeding hierarchy, captive penguins are under very different conditions. Humboldt penguins feed on schooling fish in the wild, but in captivity are hand fed from a zookeeper. I investigated whether there is a nonrandom pattern of dominance in the feeding order of the penguins at the Lincoln Children’s Zoo, in Lincoln, NE, USA. Using a camera and tripod, with assistance from four of the zookeepers, I …

Membrane Lipid Extraction Methods From Sorghum Bicolor, Max Regester

Honors Theses

Plants are the basis of the world as we know it. As sessile beings, there are often subject to many environment stressors like drought, extreme temperatures, etc. One way of analyzing how plants respond to these stressors is by monitoring changes in their lipid compositions. Having a better understanding of how plants respond to different stressors can have very important implications when it comes to cultivating crops. When testing lipid composition, it is important to measure levels as they were in the living tissue. The problem is, enzymes known as lipases are active during extraction and can greatly change the …

The Effects Of Phosphate On The Metamorphosis Of Larval Western Barred Tiger Salamanders (Ambystoma Mavortium), Lexy Polivanov

Honors Theses

This investigation will collect data to assist in determining if elevated aquatic phosphate levels affects the metamorphosis rate of larval western barred tiger salamanders (Ambystoma mavortium). Monoammonium phosphate fertilizers are being used on crops in Nebraska (NDA, 2017). This area lines up with the area the western barred tiger salamanders are disappearing from (Damme, 2018). Monoammonium phosphate is made up of nitrogen and phosphate. There have been several studies showing how nitrogen is harmful to amphibians such as this salamander (Griffis-Kyle, 2007) (Griffis-Kyle & Richtie, 2007), but there have not been many showing how phosphate affects amphibian’s metamorphosis …

The Unique Demands Of Playing Posture On Youth Violinists And Violists, Liam Carroll

Honors Theses

The high prevalence of performing arts injuries is an acknowledged challenge facing the performing arts medicine community. The injuries seem to affect string players the most among orchestral musicians, specifically violinists and violists. The asymmetrical posture, head and neck displacement, and spinal displacement required by the posture to play violin and viola can lead to discomfort or injury in the performer. Performance related musculoskeletal disorders (PRMDs) can have an adverse impact on the life of a musician, preventing them from performing or making it uncomfortable. While there is a large body of research on PRMDs relating to adult musicians, there …

Terms Of Service: The Use And Protection Of Genomic Information By Companies, Databases, And Law Enforcement, Sophia Kallas

Honors Theses

Private genomic companies have become a popular trend in the last two decades by providing customers with information regarding their ancestry and health risks. However, the profiles received from these companies can also be uploaded to public databases for various purposes, including locating other family members. Both testing companies and public databases have private interests, and both are at risk of law enforcement intervention for the purpose of forensic familial searching. There is little federal legislation protecting the privacy of an individual’s genetic profile. Consequently, it has been up to federal agencies, state laws, and judicial precedents to prevent the …

Genetic Diversity Of Potassium Ion Channel Proteins Encoded By Chloroviruses That Infect Chlorella Heliozoae, Carter Murry

Honors Theses

Chloroviruses are large, plaque-forming, double-stranded DNA viruses that infect chlorella-like green algae that live in a symbiotic relationship with protists. Chloroviruses have a genome from 290 to 370 kb, and they encode as many as 400 proteins. One interesting feature of chloroviruses is that they encode a potassium ion (K⁺) channel protein named Kcv. K⁺ channels are essential proteins for life. They cross the membrane of the cell to quickly and selectively allow K⁺ in or out of the cell. This helps regulate the electrical charge of a cell which in turn helps control electrical signaling …

German Immigration And Its Ties To Landscape Change In Nebraska, Lindsey Labrie

Honors Theses

This thesis uses a multidimensional approach to frame the different waves of German immigration within the context of land use change in Nebraska. By recounting the historical challenges and struggles Germans faced in their homelands, this thesis provides similarities between historical immigration patterns throughout the state. Observing the timing of these movements of people paints a clearer picture of how these immigrants might have helped change the farming and cultural landscapes of Nebraska. Knowing and recognizing historical immigration in Nebraska cultivates a deeper appreciation for the current relations between immigrants and Nebraska’s physical landscape.

Adaptations Of Interferon Regulatory Factor 3 During Transition From Terrestrial To Aquatic Life, Monica Angeletti

Honors Theses

Interferon regulatory factor 3 (IRF3) and IRF7 are closely related IRF members and play a major role in the induction of interferons, which are a key component in vertebrate innate immunity. However, there is limited knowledge regarding the evolution and adaptation of these IRFs to the environment. Two unique motifs in IRF3 and 7 were identified. One motif, GASSL, is highly conserved throughout the evolution of IRF3 and 7 and located in the signal response domain. Another motif, DPHK, is in the DNA-binding domain. The ancestral protein of IRF3 and 7 seemed to possess the DPHK motif. In the ray-finned …

Development And Implementation Of A Biochemistry Argumentation Task To Promote Scientific Literacy Among Undergraduate Students, Lukas Hall

Honors Theses

Science education reform efforts at the postsecondary level have been lacking regardless of meaningful reform at the K-12 level. Of these reforms, the Next Generation Science Standards (NGSS) serve to reframe effective science teaching and learning as three-dimensional (3D). That is, 3D instruction integrates core disciplinary ideas, cross-cutting concepts, and science practices to support students’ science learning. There have been calls to extend this 3D model to the postsecondary level. The purpose of this study was to design, implement, and evaluate a 3D task in a university-level biochemistry course. The task was implemented as a homework assignment to 107 students …

Effect Of Storage Time And Temperature On The Recovery Of Milk And Peanut Residue From Environmental Swabs, Jessica Humphrey, Joseph Baumert, Stephen Taylor, Shyamali Jayasena

Honors Theses

Environmental swabs of shared processing equipment are commonly utilized by the food industry during cleaning validation studies. Some of these swabs are sent to 3^rd party laboratories for evaluation. However, the recovery of protein residues of allergenic foods between the time of swabbing and time of testing has yet to be systematically studied.

The objective of this study was to determine the recovery of allergen residues (peanut and milk) from swabs held at different holding times and temperatures. Commercial ELISAs (enzyme-linked immunosorbent assays) were evaluated to determine allergen residue recovery from swabs inoculated with known amounts of peanut and …

Error In Dna Mixture Analysis: Why The Application Of Forensic Dna Is Not A Perfect Science, Rachel Bisbee

Honors Theses

Ever since the first use of DNA evidence in 1986, it has been heavily relied on in court as a means of both convicting felons and exonerating wrongfully imprisoned people. It is a valuable tool in investigations, but like everything else, is not perfect. There have been studies on the accuracy of DNA mixture interpretation in the past with varying results. This is because mixture interpretation is a complicated process that is not always as specific as would be ideal. This study attempted to determine if two students with the exact same education in forensic science and, more specifically, DNA …