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University of Nebraska - Lincoln

Plant Pathology

Department of Plant Pathology: Faculty Publications

Diagnosis

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Full-Text Articles in Life Sciences

Dna Barcoding Evidence For The North American Presence Of Alfalfa Cyst Nematode, Heterodera Medicaginis, Tom Powers, Andrea Skantar, Timothy Harris, Rebecca Higgins, Peter Mullin, Saad Hafez, Zafar Handoo, Tim Todd, Kirsten S. Powers Aug 2018

Dna Barcoding Evidence For The North American Presence Of Alfalfa Cyst Nematode, Heterodera Medicaginis, Tom Powers, Andrea Skantar, Timothy Harris, Rebecca Higgins, Peter Mullin, Saad Hafez, Zafar Handoo, Tim Todd, Kirsten S. Powers

Department of Plant Pathology: Faculty Publications

Specimens of Heterodera have been collected from alfalfa fields in Kearny County, Kansas and Carbon County, Montana. DNA barcoding with the COI mitochondrial gene indicate that the species is not Heterodera glycines, soybean cyst nematode, H. schachtii, sugar beet cyst nematode, or H. trifolii, clover cyst nematode. Maximum likelihood phylogenetic trees show that the alfalfa specimens form a sister clade most closely related to H. glycines, with a 4.7% mean pairwise sequence divergence across the 862 nucleotides of the COI marker. Morphological analyses of juveniles and cysts conform to the measurements of H. medicaginis, the alfalfa cyst nematode originally described …


A Sensitive Elisa For Pythium Ultimum Using Polyclonal And Species-Specific Monoclonal Antibodies, G. Y. Yuen, J. Q. Xia, C. L. Sutula Sep 1998

A Sensitive Elisa For Pythium Ultimum Using Polyclonal And Species-Specific Monoclonal Antibodies, G. Y. Yuen, J. Q. Xia, C. L. Sutula

Department of Plant Pathology: Faculty Publications

A double-antibody sandwich indirect enzyme-linked immunosorbent assay (ELISA) was developed for the detection and quantification of Pythium ultimum. A polyclonal antibody produced to cell walls of P. ultimum was used as the capture antibody, while a P. ultimum-specific monoclonal antibody (MAb E5) was used for recognition of the fungus. In the ELISA, culture extracts of 7 isolates of P. ultimum exhibited strong positive reactions, whereas none of the 37 isolates of other Pythium spp. and fungal genera had positive reactions. P. ultimum was detected by ELISA in roots of bean, cabbage, and sugar beet seedlings grown in pathogen-infested …


The Rdna Internal Transcribed Spacer Region As A Taxonomic Marker For Nematodes, Thomas O. Powers, T. C. Todd, A. M. Burnell, P. C. B. Murray, C. C. Flemming, Allen L. Szalanski, B. A. Adams, T. S. Harris Jan 1997

The Rdna Internal Transcribed Spacer Region As A Taxonomic Marker For Nematodes, Thomas O. Powers, T. C. Todd, A. M. Burnell, P. C. B. Murray, C. C. Flemming, Allen L. Szalanski, B. A. Adams, T. S. Harris

Department of Plant Pathology: Faculty Publications

The ITS region from a wide taxonomic range of nematodes, including secernentean and adenophorean taxa, and free-living, entomopathogenic, and plant-parasitic species, was evaluated as a taxonomic marker. Size of the amplified product aided in the initial determination of group membership, and also suggested groups that may require taxonomic reevaluation. Congeneric species often displayed identically sized ITS regions, but genera such as Pratylenchus and Tylenchorhynchus had species with large differences in size. ITS heterogeneity in individuals and populations was identified in several nematode taxa. PCR-RFLP of ITS1 is advocated as a method of taxonomic analysis in genera such as Helicotylenchus that …


Identification Of Cyst Nematodes Of Agronomic And Regulatory Concern With Pcr-Rflp Of Its1, Allen L. Szalanski, Dezhi D. Sui, T. S. Harris, Thomas O. Powers Jan 1997

Identification Of Cyst Nematodes Of Agronomic And Regulatory Concern With Pcr-Rflp Of Its1, Allen L. Szalanski, Dezhi D. Sui, T. S. Harris, Thomas O. Powers

Department of Plant Pathology: Faculty Publications

The first internally transcribed spacer region (ITS1) from cyst nematode species (Heteroderidae) was compared by nuc.leotide sequencing and PCR-RFLP. European, Asian, and North American isolates of five heterodefid species were examined to assess intraspecific variation. PCR-RFLP patterns of amplified ITS1 DNA from pea cyst nematode, Heterodera goettingiana, from Northern Ireland were identical with patterns from Washington State. Sequencing demonstrated that ITS1 heterogeneity existed within individuals and between isolates, but did not result in different restriction patterns. Three Indian and two U.S. isolates of the corn cyst nematode, Heterodera zeae, were compared. Sequencing detected variation among ITS1 clones from …