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University of Montana

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2014

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Articles 1 - 30 of 62

Full-Text Articles in Life Sciences

Investigating The Links Between Ozone And Organic Aerosol Chemistry In A Biomass Burning Plume From A Prescribed Fire In California Chaparral, M. J. Alvarado, C. R. Lonsdale, Robert Yokelson, S. K. Akagi, H. Coe, J. S. Craven, E. V. Fischer, G. R. Mcmeeking, J. H. Seinfeld, T. Soni, J. W. Taylor, D. R. Weise, C. E. Wold Dec 2014

Investigating The Links Between Ozone And Organic Aerosol Chemistry In A Biomass Burning Plume From A Prescribed Fire In California Chaparral, M. J. Alvarado, C. R. Lonsdale, Robert Yokelson, S. K. Akagi, H. Coe, J. S. Craven, E. V. Fischer, G. R. Mcmeeking, J. H. Seinfeld, T. Soni, J. W. Taylor, D. R. Weise, C. E. Wold

Chemistry and Biochemistry Faculty Publications

Within minutes after emission, rapid, complex photochemistry within a biomass burning smoke plume can cause large changes in the concentrations of ozone (O3) and organic aerosol (OA). Being able to understand and simulate this rapid chemical evolution under a wide variety of conditions is a critical part of forecasting the impact of these fires on air quality, atmospheric composition, and climate. Here we use version 2.1 of the Aerosol Simulation Program (ASP) to simulate the evolution of O3 and secondary organic aerosol (SOA) within a young biomass burning smoke plume from the Williams prescribed burn in chaparral, …


Why Did The Bear Cross The Road? Comparing The Performance Of Multiple Resistance Surfaces And Connectivity Modeling Methods, Samuel A. Cushman, Jesse S. Lewis, Erin Landguth Dec 2014

Why Did The Bear Cross The Road? Comparing The Performance Of Multiple Resistance Surfaces And Connectivity Modeling Methods, Samuel A. Cushman, Jesse S. Lewis, Erin Landguth

Biological Sciences Faculty Publications

There have been few assessments of the performance of alternative resistance surfaces, and little is known about how connectivity modeling approaches differ in their ability to predict organism movements. In this paper, we evaluate the performance of four connectivity modeling approaches applied to two resistance surfaces in predicting the locations of highway crossings by American black bears in the northern Rocky Mountains, USA. We found that a resistance surface derived directly from movement data greatly outperformed a resistance surface produced from analysis of genetic differentiation, despite their heuristic similarities. Our analysis also suggested differences in the performance of different connectivity …


Nmp-7 Inhibits Chronic Inflammatory And Neuropathic Pain Via Block Of Cab3.2 T-Type Calcium Channels And Activation Of Cb2 Receptors, N. Daniel Berger, Vinicius M. Gadotti, Ravil R. Petrov, Kevin Chapman, Philippe Diaz, Gerald W. Zamponi Dec 2014

Nmp-7 Inhibits Chronic Inflammatory And Neuropathic Pain Via Block Of Cab3.2 T-Type Calcium Channels And Activation Of Cb2 Receptors, N. Daniel Berger, Vinicius M. Gadotti, Ravil R. Petrov, Kevin Chapman, Philippe Diaz, Gerald W. Zamponi

Biological Sciences Faculty Publications

Background: T-type calcium channels and cannabinoid receptors are known to play important roles in chronic pain, making them attractive therapeutic targets. We recently reported on the design, synthesis and analgesic properties of a novel T-type channel inhibitor (NMP-7), which also shows mixed agonist activity on CB1 and CB2 receptors in vitro. Here, we analyzed the analgesic effect of systemically delivered NMP-7 (intraperitoneal (i.p.) or intragstric (i.g.) routes) on mechanical hypersensitivity in inflammatory pain induced by Complete Freund’s Adjuvant (CFA) and neuropathic pain induced by sciatic nerve injury.

Results: NMP-7 delivered by either i.p. or i.g. routes produced …


Experimental Evolution: Prospects And Challenges, Frank Rosenzweig, Gavin Sherlock Dec 2014

Experimental Evolution: Prospects And Challenges, Frank Rosenzweig, Gavin Sherlock

Biological Sciences Faculty Publications

No abstract provided.


Experimental Microbial Evolution: History And Conceptual Underpinnings, Julian Adams, Frank Rosenzweig Dec 2014

Experimental Microbial Evolution: History And Conceptual Underpinnings, Julian Adams, Frank Rosenzweig

Biological Sciences Faculty Publications

We chronicle and dissect the history of the field of Experimental Microbial Evolution, beginning with work by Monod. Early research was largely carried out by microbiologists and biochemists, who used experimental evolutionary change as a tool to understand structure-function relationships. These studies attracted the interest of evolutionary biologists who recognized the power of the approach to address issues such as the tempo of adaptive change, the costs and benefits of sex, parallelism, and the role which contingency plays in the evolutionary process. In the 1980s and 1990s, an ever-expanding body of microbial, physiological and biochemical data, together with new technologies …


The Valley-Of-Death: Reciprocal Sign Epistasis Constrains Adaptive Trajectories In A Constant, Nutrient Limiting Environment, Kami E. Chiotti, Daniel J. Kvitek, Karen H. Schmidt, Gregory Koniges, Katja Schwartz, Elizabeth A. Donckels, Frank Rosenzweig, Gavin Sherlock Dec 2014

The Valley-Of-Death: Reciprocal Sign Epistasis Constrains Adaptive Trajectories In A Constant, Nutrient Limiting Environment, Kami E. Chiotti, Daniel J. Kvitek, Karen H. Schmidt, Gregory Koniges, Katja Schwartz, Elizabeth A. Donckels, Frank Rosenzweig, Gavin Sherlock

Biological Sciences Faculty Publications

The fitness landscape is a powerful metaphor for describing the relationship between genotype and phenotype for a population under selection. However, empirical data as to the topography of fitness landscapes are limited, owing to difficulties in measuring fitness for large numbers of genotypes under any condition. We previously reported a case of reciprocal sign epistasis (RSE), where two mutations individually increased yeast fitness in a glucose-limited environment, but reduced fitness when combined, suggesting the existence of two peaks on the fitness landscape. We sought to determine whether a ridge connected these peaks so that populations founded by one mutant could …


2014 Future Earth Young Scientists Conference On Integrated Science And Knowledge Co-Production For Ecosystems And Human Well-Being, Ivy Shiue, Leah Samberg, Benard Kulohoma, Diana Dogaru, Carina Wyborn, Perrine Hamel, Peper Sogaard Jorgensen, Paul Lussier, Bharath Sundaram, Michelle Lim, Antonio Tironi Nov 2014

2014 Future Earth Young Scientists Conference On Integrated Science And Knowledge Co-Production For Ecosystems And Human Well-Being, Ivy Shiue, Leah Samberg, Benard Kulohoma, Diana Dogaru, Carina Wyborn, Perrine Hamel, Peper Sogaard Jorgensen, Paul Lussier, Bharath Sundaram, Michelle Lim, Antonio Tironi

Forest Management Faculty Publications

Effective integration in science and knowledge co-production is a challenge that crosses research boundaries, climate regions, languages and cultures. Early career scientists are crucial in the identification of, and engagement with, obstacles and opportunities in the development of innovative solutions to complex and interconnected problems. On 25-31 May 2014, International Council for Science and International Social Science Council, in collaboration with the International Network of Next-Generation Ecologists and Institute for New Economic Thinking: Young Scholars Initiative, assembled a group of early career researchers with diverse backgrounds and research perspectives to reflect on and debate relevant issues around ecosystems and human …


Cold Magnetically Trapped 2DG Scandium Atoms. I. Interaction Potential, Tijs Karman, Xi Chu, Gerrit C. Groenenboom Nov 2014

Cold Magnetically Trapped 2DG Scandium Atoms. I. Interaction Potential, Tijs Karman, Xi Chu, Gerrit C. Groenenboom

Chemistry and Biochemistry Faculty Publications

We present a first principles description of the interaction of two ground-state scandium atoms. Scandium has a 2Dg ground state. Thirty molecular states correlate to the lowest dissociation limit of the dimer. In the short range, potential energy curves are calculated using second-order n-electron valence state perturbation theory. The first-order long-range interaction is calculated at the complete active space self-consistent field level. We determine the second-order long-range dispersion interaction from atomic dynamic polarizabilities at imaginary frequencies. These polarizabilities are calculated using time-dependent density functional theory. We merge the short-range approach with the long-range model to obtain a physical …


Aerosol Emissions From Prescribed Fires In The United States: A Synthesis Of Laboratory And Aircraft Measurements, A. A. May, G. R. Mcmeeking, T. Lee, J. W. Taylor, J. S. Craven, I. R. Burling, A. P. Sullivan, Sheryl Kashi Akagi, J. L. Collett Jr., M. Flynn, H. Coe, S. P. Urbanski, J. H. Seinfeld, Robert Yokelson, S. M. Kreidenweis Oct 2014

Aerosol Emissions From Prescribed Fires In The United States: A Synthesis Of Laboratory And Aircraft Measurements, A. A. May, G. R. Mcmeeking, T. Lee, J. W. Taylor, J. S. Craven, I. R. Burling, A. P. Sullivan, Sheryl Kashi Akagi, J. L. Collett Jr., M. Flynn, H. Coe, S. P. Urbanski, J. H. Seinfeld, Robert Yokelson, S. M. Kreidenweis

Chemistry and Biochemistry Faculty Publications

Aerosol emissions from prescribed fires can affect air quality on regional scales. Accurate representation of these emissions in models requires information regarding the amount and composition of the emitted species.Wemeasured a suite of submicron particulatematter species in young plumes emitted from prescribed fires (chaparral and montane ecosystems in California; coastal plain ecosystem in South Carolina) and from open burning of over 15 individual plant species in the laboratory. We report emission ratios and emission factors for refractory black carbon (rBC) and submicron nonrefractory aerosol and compare field and laboratory measurements to assess the representativeness of our laboratory-measured emissions. Laboratory measurements …


Astrocyte-Specific Regulation Of Hmecp2 Expression In Drosophila, David Hess-Homeier, Chia-Yu Fan, Tarun Gupta, Ann-Shyn Chiang, Sarah J. Certel Oct 2014

Astrocyte-Specific Regulation Of Hmecp2 Expression In Drosophila, David Hess-Homeier, Chia-Yu Fan, Tarun Gupta, Ann-Shyn Chiang, Sarah J. Certel

Biological Sciences Faculty Publications

Alterations in the expression of Methyl-CpG-binding protein 2 (MeCP2) either by mutations or gene duplication leads to a wide spectrum of neurodevelopmental disorders including Rett Syndrome and MeCP2 duplication disorder. Common features of Rett Syndrome (RTT), MeCP2 duplication disorder, and neuropsychiatric disorders indicate that even moderate changes in MeCP2 protein levels result in functional and structural cell abnormalities. In this study, we investigated two areas of MeCP2 pathophysiology using Drosophila as a model system: the effects of MeCP2 glial gain-of-function activity on circuits controlling sleep behavior, and the cell-type specific regulation of MeCP2 expression. In this study, we first examined …


Airborne Characterization Of Smoke Marker Ratios From Prescribed Burning, A. P. Sullivan, A. A. May, T. Lee, G. R. Mcmeeking, S. M. Kreidenweis, S. K. Akagi, Robert Yokelson, S. P. Urbanski, J. L. Collett Jr. Oct 2014

Airborne Characterization Of Smoke Marker Ratios From Prescribed Burning, A. P. Sullivan, A. A. May, T. Lee, G. R. Mcmeeking, S. M. Kreidenweis, S. K. Akagi, Robert Yokelson, S. P. Urbanski, J. L. Collett Jr.

Chemistry and Biochemistry Faculty Publications

A Particle-Into-Liquid Sampler – Total Organic Carbon (PILS-TOC) and fraction collector system was flown aboard a Twin Otter aircraft sampling prescribed burning emissions in South Carolina in November 2011 to obtain smoke marker measurements. The fraction collector provided 2 min time-integrated offline samples for carbohydrate (i.e., smoke markers levoglucosan, mannosan, and galactosan) analysis by high-performance anion-exchange chromatography with pulsed amperometric detection. Each fire location appeared to have a unique 1levoglucosan /1water-soluble organic carbon (WSOC) ratio (RF01/RF02/RF03/RF05 = 0.163± 0.007 μg C μg−1 C, RF08 = 0.115 ± 0.011 μg C μg−1 C, RF09A = 0.072 ± 0.028 μgC μg−1 C, …


Trace Gas Emissions From Combustion Of Peat, Crop Residue, Domestic Biofuels, Grasses, And Other Fuels: Configuration And Fourier Transform Infrared (Ftir) Component Of The Fourth Fire Lab At Missoula Experiment (Flame-4), C. E. Stockwell, R. J. Yokelson, S. M. Kreidenweis, A. L. Robinson, P. J. Demott, R. C. Sullivan, J. Reardon, K. C. Ryan, D. W.T. Griffith, L. Stevens Sep 2014

Trace Gas Emissions From Combustion Of Peat, Crop Residue, Domestic Biofuels, Grasses, And Other Fuels: Configuration And Fourier Transform Infrared (Ftir) Component Of The Fourth Fire Lab At Missoula Experiment (Flame-4), C. E. Stockwell, R. J. Yokelson, S. M. Kreidenweis, A. L. Robinson, P. J. Demott, R. C. Sullivan, J. Reardon, K. C. Ryan, D. W.T. Griffith, L. Stevens

Chemistry and Biochemistry Faculty Publications

During the fourth Fire Lab at Missoula Experiment (FLAME-4, October-November 2012) a large variety of regionally and globally significant biomass fuels was burned at the US Forest Service Fire Sciences Laboratory in Missoula, Montana. The particle emissions were characterized by an extensive suite of instrumentation that measured aerosol chemistry, size distribution, optical properties, and cloud-nucleating properties. The trace gas measurements included high-resolution mass spectrometry, one-and two-dimensional gas chromatography, and open-path Fourier transform infrared (OP-FTIR) spectroscopy. This paper summarizes the overall experimental design for FLAME-4-including the fuel properties, the nature of the burn simulations, and the instrumentation employed-and then focuses on …


Inter-Calibration Of Satellite Passive Microwave Land Observations From Amsr-E And Amsr2 Using Overlapping Fy3b-Mwri Sensor Measurements, Jinyang Du, John S. Kimball, Jiancheng Shi, Lucas Alan Jones, Shengli Wu, Ruijing Sun, Hu Yang Sep 2014

Inter-Calibration Of Satellite Passive Microwave Land Observations From Amsr-E And Amsr2 Using Overlapping Fy3b-Mwri Sensor Measurements, Jinyang Du, John S. Kimball, Jiancheng Shi, Lucas Alan Jones, Shengli Wu, Ruijing Sun, Hu Yang

Biological Sciences Faculty Publications

The development and continuity of consistent long-term data records from similar overlapping satellite observations is critical for global monitoring and environmental change assessments. We developed an empirical approach for inter-calibration of satellite microwave brightness temperature (Tb) records over land from the Advanced Microwave Scanning Radiometer for EOS (AMSR-E) and Microwave Scanning Radiometer 2 (AMSR2) using overlapping Tb observations from the Microwave Radiation Imager (MWRI). Double Differencing (DD) calculations revealed significant AMSR2 and MWRI biases relative to AMSR-E. Pixel-wise linear relationships were established from overlapping Tb records and used for calibrating MWRI and AMSR2 records to the AMSR-E …


Retrievals Of All-Weather Daily Air Temperature Using Modis And Amsr-E Data, Keunchang Jang, Sinkyu Kang, John S. Kimball, Suk Young Hong Sep 2014

Retrievals Of All-Weather Daily Air Temperature Using Modis And Amsr-E Data, Keunchang Jang, Sinkyu Kang, John S. Kimball, Suk Young Hong

Biological Sciences Faculty Publications

Satellite optical-infrared remote sensing from the Moderate Resolution Imaging Spectroradiometer (MODIS) provides effective air temperature (Ta) retrieval at a spatial resolution of 5 km. However, frequent cloud cover can result in substantial signal loss and remote sensing retrieval error in MODIS Ta. We presented a simple pixel-wise empirical regression method combining synergistic information from MODIS Ta and 37 GHz frequency brightness temperature (Tb) retrievals from the Advanced Microwave Scanning Radiometer for the Earth Observing System (AMSR-E) for estimating surface level Ta under both clear and cloudy sky conditions in the United …


Identification And Quantification Of Gaseous Organic Compounds Emitted From Biomass Burning Using Two-Dimensional Gas Chromatography/Time-Of-Flight Mass Spectrometry, L. E. Hatch, W. Luo, J. F. Pankow, Robert Yokelson, C. Stockwell, K. C. Barsanti Sep 2014

Identification And Quantification Of Gaseous Organic Compounds Emitted From Biomass Burning Using Two-Dimensional Gas Chromatography/Time-Of-Flight Mass Spectrometry, L. E. Hatch, W. Luo, J. F. Pankow, Robert Yokelson, C. Stockwell, K. C. Barsanti

Chemistry and Biochemistry Faculty Publications

The current understanding of secondary organic aerosol (SOA) formation within biomass burning (BB) plumes is limited by the incomplete identification and quantification of the non-methane organic compounds (NMOCs) emitted from such fires. Gaseous organic compounds were collected on sorbent cartridges during laboratory burns as part of the fourth Fire Lab at Missoula Experiment (FLAME-4), with analysis by two-dimensional gas chromatography/time-of-flight mass spectrometry (GC×GC/TOFMS). The sensitivity and resolving power of GC×GC/TOFMS allowed the acquisition of the most extensive data set of BB NMOCs to date, with measure ments for 722 positively or tentatively identified compounds. Estimated emission factors (EFs) are presented …


Combining Demographic And Genetic Factors To Assess Population Vulnerability In Stream Species, Erin Landguth, C. C. Muhlfeld, R. S. Waples, L. Jones, Winsor H. Lowe, Diane C. Whited, J. Lucotch, H. Neville, Gordon Luikart Sep 2014

Combining Demographic And Genetic Factors To Assess Population Vulnerability In Stream Species, Erin Landguth, C. C. Muhlfeld, R. S. Waples, L. Jones, Winsor H. Lowe, Diane C. Whited, J. Lucotch, H. Neville, Gordon Luikart

Biological Sciences Faculty Publications

Accelerating climate change and other cumulative stressors create an urgent need to understand the influence of environmental variation and landscape features on the connectivity and vulnerability of freshwater species. Here, we introduce a novel modeling framework for aquatic systems that integrates spatially explicit, individual-based, demographic and genetic (demogenetic) assessments with environmental variables. To show its potential utility, we simulated a hypothetical network of 19 migratory riverine populations (e.g., salmonids) using a riverscape connectivity and demogenetic model (CDFISH). We assessed how stream resistance to movement (a function of water temperature, fluvial distance, and physical barriers) might influence demogenetic connectivity, and hence, …


Changing Forest Structure Across The Landscape Of The Sierra Nevada, Ca, Usa, Since The 1930s, Christopher R. Dolanc, Hugh D. Safford, James H. Thorne, Solomon Z. Dobrowski Aug 2014

Changing Forest Structure Across The Landscape Of The Sierra Nevada, Ca, Usa, Since The 1930s, Christopher R. Dolanc, Hugh D. Safford, James H. Thorne, Solomon Z. Dobrowski

Forest Management Faculty Publications

Understanding the dynamics of forest structure aids inference regarding future forests and their distributions around the world. Over the last few decades, several papers have addressed changing forest structure in the Sierra Nevada, CA, USA, but these studies were limited in scope. We carried out a broad comparison of forest density and composition in the 1930s versus the 2000s for the west slope of the central and northern Sierra Nevada, using the two most extensive data sets available. Forests in this region have endured a long, complex history of human disturbance, and are now experiencing climatic shifts. We subdivided the …


The Genomic Architecture Of Population Divergence Between Subspecies Of The European Rabbit, Miguel Carneiro, Frank W. Albert, Sandra Afonso, Ricardo J. Pereira, Hernan Burbano, Rita Campos, Jose Melo-Ferreira, Jose A. Blanco-Aguiar, Rafael Villafuerte, Michael W. Nachman, Jeffrey M. Good, Nuno Ferrand Aug 2014

The Genomic Architecture Of Population Divergence Between Subspecies Of The European Rabbit, Miguel Carneiro, Frank W. Albert, Sandra Afonso, Ricardo J. Pereira, Hernan Burbano, Rita Campos, Jose Melo-Ferreira, Jose A. Blanco-Aguiar, Rafael Villafuerte, Michael W. Nachman, Jeffrey M. Good, Nuno Ferrand

Biological Sciences Faculty Publications

The analysis of introgression of genomic regions between divergent populations provides an excellent opportunity to determine the genetic basis of reproductive isolation during the early stages of speciation. However, hybridization and subsequent gene flow must be relatively common in order to localize individual loci that resist introgression. In this study, we used next-generation sequencing to study genome-wide patterns of genetic differentiation between two hybridizing subspecies of rabbits (Oryctolagus cuniculus algirus and O. c. cuniculus) that are known to undergo high rates of gene exchange. Our primary objective was to identify specific genes or genomic regions that have resisted …


Meanings And Robustness: Propositions For Enhancing Benefit Sharing In Social-Ecological Systems, Ernita Van Wyk, Charles Breen, Wayne A. Freimund Aug 2014

Meanings And Robustness: Propositions For Enhancing Benefit Sharing In Social-Ecological Systems, Ernita Van Wyk, Charles Breen, Wayne A. Freimund

Society and Conservation Faculty Publications

Given increased pressure on natural resources to deliver benefits, complex trade-offs and the regulation of behaviours in relation to benefits is of key concern. Behaviours that signify resistance to the rules according to which benefits are allocated prompt us to consider causal links and feedbacks between benefits, perceptions of benefits, meanings attached to the benefits, and the regulatory instruments that mediate the distribution of benefits. An understanding of how meanings influence the perception of benefits exposes the complexity inherent in how people perceive and allocate value to natural resource benefits. Meanings are personal, sometimes overlapping, context dependent and variable across …


Spatially Nonrandom Tree Mortality And Ingrowth Maintain Equilibrium Pattern In An Old-Growth Pseudotsuga–Tsuga Forest, James A. Lutz, Andrew J. Larson, Tucker J. Furniss, Daniel C. Donato, James A. Freund, Mark E. Swanson, Kenneth J. Bible, Jiquan Chen, Jerry F. Franklin Aug 2014

Spatially Nonrandom Tree Mortality And Ingrowth Maintain Equilibrium Pattern In An Old-Growth Pseudotsuga–Tsuga Forest, James A. Lutz, Andrew J. Larson, Tucker J. Furniss, Daniel C. Donato, James A. Freund, Mark E. Swanson, Kenneth J. Bible, Jiquan Chen, Jerry F. Franklin

Forest Management Faculty Publications

Mortality processes in old-growth forests are generally assumed to be driven by gap-scale disturbance, with only a limited role ascribed to density-dependent mortality, but these assumptions are rarely tested with data sets incorporating repeated measurements. Using a 12-ha spatially explicit plot censused 13 years apart in an approximately 500-year-old Pseudotsuga–Tsuga forest, we demonstrate significant density-dependent mortality and spatially aggregated tree recruitment. However, the combined effect of these strongly nonrandom demographic processes was to maintain tree patterns in a state of dynamic equilibrium. Density-dependent mortality was most pronounced for the dominant latesuccessional species, Tsuga heterophylla. The long-lived, early-seral Pseudotsuga menziesii …


Are Local Filters Blind To Provenance? Ant Seed Predation Suppresses Exotic Plants More Than Natives, Dean Pearson, Nadia S. Icasatti, Jose L. Hierro, Benjamin J. Bird Aug 2014

Are Local Filters Blind To Provenance? Ant Seed Predation Suppresses Exotic Plants More Than Natives, Dean Pearson, Nadia S. Icasatti, Jose L. Hierro, Benjamin J. Bird

Biological Sciences Faculty Publications

The question of whether species’ origins influence invasion outcomes has been a point of substantial debate in invasion ecology. Theoretically, colonization outcomes can be predicted based on how species’ traits interact with community filters, a process presumably blind to species’ origins. Yet, exotic plant introductions commonly result in monospecific plant densities not commonly seen in native assemblages, suggesting that exotic species may respond to community filters differently than natives. Here, we tested whether exotic and native species differed in their responses to a local community filter by examining how ant seed predation affected recruitment of eighteen native and exotic plant …


Limitations To Estimating Bacterial Cross-Species Transmission Using Genetic And Genomic Markers: Inferences From Simulation Modeling, Julio A. Benavides, Paul C. Cross, Gordon Luikart, Scott Creel Aug 2014

Limitations To Estimating Bacterial Cross-Species Transmission Using Genetic And Genomic Markers: Inferences From Simulation Modeling, Julio A. Benavides, Paul C. Cross, Gordon Luikart, Scott Creel

Biological Sciences Faculty Publications

Cross-species transmission (CST) of bacterial pathogens has major implications for human health, livestock, and wildlife management because it determines whether control actions in one species may have subsequent effects on other potential host species. The study of bacterial transmission has benefitted from methods measuring two types of genetic variation: variable number of tandem repeats (VNTRs) and single nucleotide polymorphisms (SNPs). However, it is unclear whether these data can distinguish between different epidemiological scenarios. We used a simulation model with two host species and known transmission rates (within and between species) to evaluate the utility of these markers for inferring CST. …


The Gps Craze: Six Questions To Address Before Deciding To Deploy Gps Technology On Wildlife, A. David M. Latham, M. Cecilia Latham, Dean P. Anderson, Jen Cruz, Dan Herries, Mark Hebblewhite Jul 2014

The Gps Craze: Six Questions To Address Before Deciding To Deploy Gps Technology On Wildlife, A. David M. Latham, M. Cecilia Latham, Dean P. Anderson, Jen Cruz, Dan Herries, Mark Hebblewhite

Wildlife Biology Faculty Publications

GPS and satellite technology for studies on wildlife have improved substantially over the past decade. It is now possible to collect fine-scale location data from migratory animals, animals that have previously been too small to deploy GPS devices on, and other difficult-to-study species. Often researchers and managers have formatted well-defined ecological or conservation questions prior to deploying GPS on animals, whereas other times it is arguably done simply because the technology is now available to do so. We review and discuss six important interrelated questions that should be addressed when planning a study requiring location data. Answers will clarify whether …


Nutrient Addition Dramatically Accelerates Microbial Community Succession, Joseph E. Knelman, Steven K. Schmidt, Ryan C. Lynch, John L. Darcy, Sarah C. Castle, Cory C. Cleveland, Diana R. Nemergut Jul 2014

Nutrient Addition Dramatically Accelerates Microbial Community Succession, Joseph E. Knelman, Steven K. Schmidt, Ryan C. Lynch, John L. Darcy, Sarah C. Castle, Cory C. Cleveland, Diana R. Nemergut

Ecosystem and Conservation Sciences Faculty Publications

The ecological mechanisms driving community succession are widely debated, particularly for microorganisms. While successional soil microbial communities are known to undergo predictable changes in structure concomitant with shifts in a variety of edaphic properties, the causal mechanisms underlying these patterns are poorly understood. Thus, to specifically isolate how nutrients – important drivers of plant succession – affect soil microbial succession, we established a full factorial nitrogen (N) and phosphorus (P) fertilization plot experiment in recently deglaciated (~3 years since exposure), unvegetated soils of the Puca Glacier forefield in Southeastern Peru. We evaluated soil properties and examined bacterial community composition in …


Oroya Fever And Verruga Peruana: Bartonelloses Unique To South America, Michael F. Minnick, Burt E. Anderson, Amorce Lima, James M. Battisti, Phillip G. Lawyer, Richard J. Birtles Jul 2014

Oroya Fever And Verruga Peruana: Bartonelloses Unique To South America, Michael F. Minnick, Burt E. Anderson, Amorce Lima, James M. Battisti, Phillip G. Lawyer, Richard J. Birtles

Biological Sciences Faculty Publications

Bartonella bacilliformis is the bacterial agent of Carrión's disease and is presumed to be transmitted between humans by phlebotomine sand flies. Carrión's disease is endemic to high-altitude valleys of the South American Andes, and the first reported outbreak (1871) resulted in over 4,000 casualties. Since then, numerous outbreaks have been documented in endemic regions, and over the last two decades, outbreaks have occurred at atypical elevations, strongly suggesting that the area of endemicity is expanding. Approximately 1.7 million South Americans are estimated to be at risk in an area covering roughly 145,000 km2 of Ecuador, Colombia, and Peru. Although disease …


Can Fire Atlas Data Improve Species Distribution Model Projections?, Shawn M. Crimmins, Solomon Z. Dobrowski, Alison R. Mynsberge, Hugh D. Safford Jul 2014

Can Fire Atlas Data Improve Species Distribution Model Projections?, Shawn M. Crimmins, Solomon Z. Dobrowski, Alison R. Mynsberge, Hugh D. Safford

Forest Management Faculty Publications

Correlative species distribution models (SDMs) are widely used in studies of climate change impacts, yet are often criticized for failing to incorporate disturbance processes that can influence species distributions. Here we use two temporally independent data sets of vascular plant distributions, climate data, and fire atlas data to examine the influence of disturbance history on SDM projection accuracy through time in the mountain ranges of California, USA. We used hierarchical partitioning to examine the influence of fire occurrence on the distribution of 144 vascular plant species and built a suite of SDMs to examine how the inclusion of fire-related predictors …


Granivory Of Invasive, Naturalized, And Native Plants In Communities Differentially Susceptible To Invasion, B. M. Connolly, Dean Pearson, R. N. Mack Jul 2014

Granivory Of Invasive, Naturalized, And Native Plants In Communities Differentially Susceptible To Invasion, B. M. Connolly, Dean Pearson, R. N. Mack

Biological Sciences Faculty Publications

Seed predation is an important biotic filter that can influence abundance and spatial distributions of native species through differential effects on recruitment. This filter may also influence the relative abundance of nonnative plants within habitats and the communities’ susceptibility to invasion via differences in granivore identity, abundance, and food preference. We evaluated the effect of postdispersal seed predators on the establishment of invasive, naturalized, and native species within and between adjacent forest and steppe communities of eastern Washington, USA that differ in severity of plant invasion. Seed removal from trays placed within guild-specific exclosures revealed that small mammals were the …


Morphological Variability In Tree Root Architecture Indirectly Affects Coexistence Among Competitors In The Understory, Erik T. Aschehoug, Ragan M. Callaway Jul 2014

Morphological Variability In Tree Root Architecture Indirectly Affects Coexistence Among Competitors In The Understory, Erik T. Aschehoug, Ragan M. Callaway

Biological Sciences Faculty Publications

Interactions between plants can have strong effects on community structure and function. Variability in the morphological, developmental, physiological, and biochemical traits of plants can influence the outcome of plant interactions and thus have important ecological consequences. However, the ecological ramifications of trait variability in plants are poorly understood and have rarely been tested in the field. We experimentally tested the effects of morphological variation in root architecture of Quercus douglasii trees in the field on interactions between understory plants and community composition. Our results indicate that variability among Q. douglasii tree root systems initiates a striking reversal in the competitive …


Surface Water Inundation In The Boreal-Artic: Potential Impacts On Regional Methane Emissions, J. D. Watts, John S. Kimball, Annett Bartsch, Kyle C. Mcdonald Jun 2014

Surface Water Inundation In The Boreal-Artic: Potential Impacts On Regional Methane Emissions, J. D. Watts, John S. Kimball, Annett Bartsch, Kyle C. Mcdonald

Biological Sciences Faculty Publications

Northern wetlands may be vulnerable to increased carbon losses from methane (CH4), a potent greenhouse gas, under current warming trends. However, the dynamic nature of open water inundation and wetting/drying patterns may constrain regional emissions, offsetting the potential magnitude of methane release. Here we conduct a satellite data driven model investigation of the combined effects of surface warming and moisture variability on high northern latitude (45° N) wetland CH4 emissions, by considering (1) sub-grid scale changes in fractional water inundation (Fw) at 15 day, monthly and annual intervals using 25 km resolution satellite microwave retrievals, and (2) …


Ex Uno Plures: Clonal Reinforcement Drives Evolution Of A Simple Microbial Community, Margie A. Kinnersley, Jared Wenger, Evgueny Kroll, Julian Adams, Gavin Sherlock, Frank Rosenzweig Jun 2014

Ex Uno Plures: Clonal Reinforcement Drives Evolution Of A Simple Microbial Community, Margie A. Kinnersley, Jared Wenger, Evgueny Kroll, Julian Adams, Gavin Sherlock, Frank Rosenzweig

Biological Sciences Faculty Publications

A major goal of genetics is to define the relationship between phenotype and genotype, while a major goal of ecology is to identify the rules that govern community assembly. Achieving these goals by analyzing natural systems can be difficult, as selective pressures create dynamic fitness landscapes that vary in both space and time. Laboratory experimental evolution offers the benefit of controlling variables that shape fitness landscapes, helping to achieve both goals. We previously showed that a clonal population of E. coli experimentally evolved under continuous glucose limitation gives rise to a genetically diverse community consisting of one clone, CV103, that …