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Full-Text Articles in Life Sciences

Linear Methods For Analysis And Quality Control Of Relative Expression Ratios From Quantitative Real-Time Polymerase Chain Reaction Experiments, Robert B. Page, A. J. Stromberg Jan 2011

Linear Methods For Analysis And Quality Control Of Relative Expression Ratios From Quantitative Real-Time Polymerase Chain Reaction Experiments, Robert B. Page, A. J. Stromberg

Biology Faculty Publications

Relative expression quantitative real-time polymerase chain reaction (RT-qPCR) experiments are a common means of estimating transcript abundances across biological groups and experimental treatments. One of the most frequently used expression measures that results from such experiments is the relative expression ratio (RE), which describes expression in experimental samples (i.e., RNA isolated from organisms, tissues, and/or cells that were exposed to one or more experimental or nonbaseline condition) in terms of fold change relative to calibrator samples (i.e., RNA isolated from organisms, tissues, and/or cells that were exposed to a control or baseline condition). Over the past decade, several models of …


Development Of A Semi-Field System For Contained Field Trials With Aedes Aegypti In Southern Mexico, L. Facchinelli, L. Valerio, J. G. Bond, Megan R. Wise De Valdez, L. C. Harrington, J. M. Ramsey, M. Casas-Martinez, T. W. Scott Jan 2011

Development Of A Semi-Field System For Contained Field Trials With Aedes Aegypti In Southern Mexico, L. Facchinelli, L. Valerio, J. G. Bond, Megan R. Wise De Valdez, L. C. Harrington, J. M. Ramsey, M. Casas-Martinez, T. W. Scott

Biology Faculty Publications

Development of new genetic approaches to either interfere with the ability of mosquitoes to transmit dengue virus or to reduce vector population density requires progressive evaluation from the laboratory to contained field trials, before open field release. Trials in contained outdoor facilities are an important part of this process because they can be used to evaluate the effectiveness and reliability of modified strains in settings that include natural environmental variations without releasing mosquitoes into the open field. We describe a simple and cost-effective semi-field system designed to study Aedes aegypti carrying a dominant lethal gene (fsRIDL) in semi-field conditions. We …


Genetic Elimination Of Dengue Vector Mosquitoes, Megan R. Wise De Valdez, D. Nimmo, J. Betz, H.-F. Gong, A. A. James, L. Alphey, W. C. Black Iv Jan 2011

Genetic Elimination Of Dengue Vector Mosquitoes, Megan R. Wise De Valdez, D. Nimmo, J. Betz, H.-F. Gong, A. A. James, L. Alphey, W. C. Black Iv

Biology Faculty Publications

An approach based on mosquitoes carrying a conditional dominant lethal gene (release of insects carrying a dominant lethal, RIDL) is being developed to control the transmission of dengue viruses by vector population suppression. A transgenic strain, designated OX3604C, of the major dengue vector, Aedes aegypti, was engineered to have a repressible female-specific flightless phenotype. This strain circumvents the need for radiation-induced sterilization, allows genetic sexing resulting in male-only releases, and permits the release of eggs instead of adult mosquitoes. OX3604C males introduced weekly into large laboratory cages containing stable target mosquito populations at initial ratios of 8.5-10:1 OX3604C:target eliminated the …


Simulation Of Spatial Movement That Potentially Maximizes Assessment, Presence, And Defence In Territorial And Home-Ranging Animals, With Special Reference To Territorial Sex-Changing Fishes, Thomas R. Brown, Joshua Jowers, Marvin M.F. Lutnesky Jan 2011

Simulation Of Spatial Movement That Potentially Maximizes Assessment, Presence, And Defence In Territorial And Home-Ranging Animals, With Special Reference To Territorial Sex-Changing Fishes, Thomas R. Brown, Joshua Jowers, Marvin M.F. Lutnesky

Biology Faculty Publications

Question: Are there territory sizes, shapes, and movement rules that animals can use to maximize their presence for territorial and reproductive purposes? Features of the model: Individual-oriented simulation model of a focal male, a female (his mate), and six other males in adjacent territories. Simulation variables were territory size and aspect (length-to-width ratio), velocity, step size, and potential movement angle. Each simulation represented 10,000 s of real time, and simulations were repeated until convergence on maximum mean encounter rates (MER) of a focal male with the female and other males was reached. Ranges of variables: Simulations consisted of three velocities …