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Full-Text Articles in Life Sciences
Adenosine Triphosphate (Atp) As A Metric Of Microbial Biomass In Aquatic Systems: New Simplified Protocols, Laboratory Validation, And A Reflection On Data From The Literature, Alexander B. Bochdansky, Alison N. Stouffer, Nyjaee N. Washington
Adenosine Triphosphate (Atp) As A Metric Of Microbial Biomass In Aquatic Systems: New Simplified Protocols, Laboratory Validation, And A Reflection On Data From The Literature, Alexander B. Bochdansky, Alison N. Stouffer, Nyjaee N. Washington
OES Faculty Publications
The use of adenosine triphosphate (ATP) as a universal biomass indicator is built on the premise that ATP concentration tracks biomass rather than the physiological condition of cells. However, reportedly high variability in ATP in response to environmental conditions is the main reason the method has not found widespread application. To test possible sources of this variability, we used the diatom Thalassiosira weissflogii as a model and manipulated its growth rate through nutrient limitation and through exposure to three different temperatures (15°C, 20°C, and 25°C). We simplified the ATP protocol with hot‐water or chemical extraction methods, modified a commercially available …
Seaflow Data V1, High-Resolution Abundance, Size And Biomass Of Small Phytoplankton In The North Pacific, François Ribalet, Chris Berthiaume, Annette Hynes, Jarred Swalwell, Michael Carlson, Sophie Clayton, Gwenn Hennon, Camille Poirier, Eric Shimabukuro, Angelicque White, E. Virginia Armhurst
Seaflow Data V1, High-Resolution Abundance, Size And Biomass Of Small Phytoplankton In The North Pacific, François Ribalet, Chris Berthiaume, Annette Hynes, Jarred Swalwell, Michael Carlson, Sophie Clayton, Gwenn Hennon, Camille Poirier, Eric Shimabukuro, Angelicque White, E. Virginia Armhurst
OES Faculty Publications
SeaFlow is an underway flow cytometer that provides continuous shipboard observations of the abundance and optical properties of small phytoplankton (μm in equivalent spherical diameter, ESD). Here we present data sets consisting of SeaFlow-based cell abundance, forward light scatter, and pigment fluorescence of individual cells, as well as derived estimates of ESD and cellular carbon content of picophytoplankton, which includes the cyanobacteria Prochlorococcus, Synechococcus and small-sized Crocosphaera (μm ESD), and picophytoplankton and nanophytoplankton (2–5 μm ESD). Data were collected in surface waters (≈5 m depth) from 27 oceanographic cruises carried out in the Northeast Pacific Ocean between 2010 and 2018. …
Estimating Sustainable Harvests Of Eastern Oysters, Crassostrea Virginica, Thomas M. Soniat, Nathan Cooper, Eric N. Powell, John M. Klinck, Mahdi Abdelguerfi, Shengru Tu, Roger Mann, Patrick D. Banks
Estimating Sustainable Harvests Of Eastern Oysters, Crassostrea Virginica, Thomas M. Soniat, Nathan Cooper, Eric N. Powell, John M. Klinck, Mahdi Abdelguerfi, Shengru Tu, Roger Mann, Patrick D. Banks
CCPO Publications
Sustainability of a fishery is traditionally and typically considered achieved if the exploited population does not decline in numbers or biomass over time as a result of fishing relative to biological reference point goals. Oysters, however, exhibit atypical population dynamics compared with many other commercial species. The population dynamics often display extreme natural interannual variation in numbers and biomass, and oysters create their own habitat--the reef itself. With the worldwide decline of oyster reef habitat and the oyster fisheries dependent thereon, the maintenance of shell has received renewed attention as essential to population sustainability. We apply a shell budget model …
Benthic Ecology From Space: Optics And Net Primary Production In Seagrass And Benthic Algae Across The Great Bahama Bank, Heidi M. Dierssen, Richard C. Zimmerman, Lisa A. Drake, David J. Burdige
Benthic Ecology From Space: Optics And Net Primary Production In Seagrass And Benthic Algae Across The Great Bahama Bank, Heidi M. Dierssen, Richard C. Zimmerman, Lisa A. Drake, David J. Burdige
OES Faculty Publications
Development of repeatable and quantitative tools are necessary for determining the abundance and distribution of different types of benthic habitats, detecting changes to these ecosystems, and determining their role in the global carbon cycle. Here we used ocean color remote sensing techniques to map different major groups of primary producers and estimate net primary productivity (NPP) across Great Bahama Bank (GBB). Field investigations on the northern portion of the GBB in 2004 revealed 3 dominant types of benthic primary producers: seagrass, benthic macroalgae, and microalgae attached to sediment. Laboratory measurements of NPP ranged from barely net autotrophic for grapestone sediment …
Potential Export Of Unattached Benthic Macroalgae To The Deep Sea Through Wind Driven Langmuir Circulation, H. M. Dierssen, Richard C. Zimmerman, Lisa A. Drake, David J. Burdige
Potential Export Of Unattached Benthic Macroalgae To The Deep Sea Through Wind Driven Langmuir Circulation, H. M. Dierssen, Richard C. Zimmerman, Lisa A. Drake, David J. Burdige
OES Faculty Publications
Carbon export to the deep sea is conventionally attributed to the sinking of open ocean phytoplankton. Here, we report a Langmuir supercell event driven by high winds across the shallow Great Bahama Bank that organized benthic non-attached macroalgae, Colpomenia sp., into visible windrows on the seafloor. Ocean color satellite imagery obtained before and after the windrows revealed a 588 km2 patch that rapidly shifted from highly productive macroalgae to bare sand. We assess a number of possible fates for this macroalgae and contend that this event potentially transported negatively buoyant macroalgae to the deep Tongue of the Ocean …
Simulations Of Phytoplankton Species And Carbon Production In The Equatorial Pacific Ocean 1. Model Configuration And Ecosystem Dynamics, Baris Salihoglu, Eileen E. Hofmann
Simulations Of Phytoplankton Species And Carbon Production In The Equatorial Pacific Ocean 1. Model Configuration And Ecosystem Dynamics, Baris Salihoglu, Eileen E. Hofmann
OES Faculty Publications
The primary objective of this research is to investigate phytoplankton community response to variations in physical forcing and biological processes in the Cold Tongue region of the equatorial Pacific Ocean at 0N, 140W. This research objective was addressed using a one-dimensional multicomponent lower trophic level ecosystem model that includes detailed algal physiology, such as spectrally-dependent photosynthetic processes and iron limitation on algal growth. The ecosystem model is forced by a one-year (1992) time series of spectrally-dependent light, temperature, and water column mixing obtained from a Tropical Atmosphere-Ocean (TAO) Array mooring. Autotrophic growth is represented by five algal groups, which have …
A Unique Seasonal Pattern In Phytoplankton Biomass In Low-Latitude Waters In The South China Sea, Chun-Mao Tseng, George T. F. Wong, I.-I. Lin, C.-R. Wu, K.-K. Liu
A Unique Seasonal Pattern In Phytoplankton Biomass In Low-Latitude Waters In The South China Sea, Chun-Mao Tseng, George T. F. Wong, I.-I. Lin, C.-R. Wu, K.-K. Liu
OES Faculty Publications
A distinctive seasonal pattern in phytoplankton biomass was observed at the South East Asian Time series Study (SEATS) station (18°N, 116°E) in the northern South China Sea (SCS). Surface chlorophyll-a, depth integrated chlorophyll-a and primary production were elevated to 0.3 mg/m3, ~35 mg/m2 and 300 mg-C/m2/d, respectively, in the winter but stayed low, at 0.1 mg/m3, ~15 mg/m2 and 110 mg-C/m2/d as commonly found in other low latitude waters, in the rest of the year. Concomitantly, soluble reactive phosphate and nitrate+nitrite in the mixed layer also became …
Bio-Optical Properties Of The Labrador Sea, Glenn F. Cota, W. Glen Harrison, Trevor Platt, Shubha Sathyendranath, Venetia Stuart
Bio-Optical Properties Of The Labrador Sea, Glenn F. Cota, W. Glen Harrison, Trevor Platt, Shubha Sathyendranath, Venetia Stuart
CCPO Publications
Three cruises were conducted during fall and spring in the Labrador Sea to investigate the effects of bio-optical properties on satellite retrievals of phytoplankton chlorophyll in this important high-latitude ecosystem. Taxon-specific and regional differences were found. Diatoms had similar to 1.5 lower chlorophyll-specific absorption but significantly higher reflectance ratios than prymnesiophytes. Particulate absorption at 443 nm for total, phytoplankton, and "detrital'' fractions was related to chlorophyll, but values were lower than reported for lower latitudes. Decreased particulate absorption is attributed primarily to pigment packaging, while low backscattering to scattering ratios result from a lower relative abundance of bacteria and picophytoplankton …
Estuarine Relationships Between Zooplankton Community Structure And Trophic Gradients, Gyung Soo Park, Harold G. Marshall
Estuarine Relationships Between Zooplankton Community Structure And Trophic Gradients, Gyung Soo Park, Harold G. Marshall
Biological Sciences Faculty Publications
Zooplankton and water quality parameters were investigated at eight mesohaline stations in the lower Chesapeake Bay and Elizabeth River from January through December 1994 to identify the changes of zooplankton community structure with increased eutrophication. The total micro- and mesozooplankton biomass decreased with the increase of eutrophication. However, the relative proportion of microzooplankton increased with increased eutrophication. Within highly eutrophied waters, the small oligotrichs (m) and rotifers dominated the total zooplankton biomass (as carbon). However, tintinnids, copepod nauplii and mesozooplankton significantly decreased with the increase of eutrophication. These patterns were consistent throughout the seasons and had significant relationships statistically. These …
Fisheries And Oceanography Off Galicia, Nw Spain: Mesoscale Spatial And Temporal Changes In Physical Processes And Resultant Patterns Of Biological Productivity, K. R. Tenore, M. Alonsonval, L. P. Atkinson, J. M. Cabanas, R. M. Cal, H. J. Campos, F. Castillejo, E. J, Chesney, N. Gonzalez, R. B. Hanson, C. R. Mcclain, A. Miranda, M. R. Roman, J. Sanchez, G. Santiago, L. Valdes, M. Varela, J. Yoder
Fisheries And Oceanography Off Galicia, Nw Spain: Mesoscale Spatial And Temporal Changes In Physical Processes And Resultant Patterns Of Biological Productivity, K. R. Tenore, M. Alonsonval, L. P. Atkinson, J. M. Cabanas, R. M. Cal, H. J. Campos, F. Castillejo, E. J, Chesney, N. Gonzalez, R. B. Hanson, C. R. Mcclain, A. Miranda, M. R. Roman, J. Sanchez, G. Santiago, L. Valdes, M. Varela, J. Yoder
CCPO Publications
The Galician shelf off NW Spain (43N degrees 9W degrees) exhibits mesoscale spatial and temporal changes in biological productivity associated with upwelling. Spatial heterogeneity results from local geomorphic and land-sea interactions superimposed on the large scale atmospheric processes that produce upwelling. Wind-induced upwelling events, commonly of short (i.e., week) duration, are more common in the summer than in the winter. A Series of cruises, including some time series sampling, and satellite imagery analysis showed that surface upwelling was more common and persistent on the northern coast compared with the western coast off the coastal embayments, the Rias Bajas. Nearshore off …
Observations Of The Phytoplankton Standing Crop At The Shelf Margin Of The Mid Atlantic Bight, Bruce B. Wagoner, Harold G. Marshall
Observations Of The Phytoplankton Standing Crop At The Shelf Margin Of The Mid Atlantic Bight, Bruce B. Wagoner, Harold G. Marshall
Biological Sciences Faculty Publications
A comparison of the total percentage cell abundance and cell biovolume relationships of major phytoplankton categories was made between two station sets across the shelf margin. Diatom values for abundance and biovolume were greater at oceanic stations compared to the outer shelf stations, with dinoflagellates having the reverse pattern. The composite contributions to biovolume and abundance in the standing crop from other phytoplankton categories were greater over the outer shelf than beyond the shelf margin. The major source of biovolume (biomass) from the outer shelf and these oceanic stations came from the diatoms and dinoflagellates, with an average mean of …