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Full-Text Articles in Life Sciences

The Affect Of Low Tide On The Digestion Of Balanus Glandula, The Acorn Barnacle., Jesse Osborn May 2013

The Affect Of Low Tide On The Digestion Of Balanus Glandula, The Acorn Barnacle., Jesse Osborn

Scripps Senior Theses

The rocky intertidal zone, experiencing fully marine and fully terrestrial conditions, has become increasingly investigated as a model ecosystem for studying the future implications of climate change. The barnacle, Balanus glandula, a common rocky intertidal inhabitant, plays an important role as a key prey item for many organisms. Low tide can be particularly challenging for barnacles as they are marine organisms subjected to the abiotic conditions of a terrestrial environment. The most stressful of these are increased temperature and decreased oxygen availability. This study aimed to investigate how low tide impacts the energy budget, specifically the digestion, of B. …


Food Security On Maui: Reinventing Agriculture In The Aloha State, Jade Silver Apr 2013

Food Security On Maui: Reinventing Agriculture In The Aloha State, Jade Silver

Scripps Senior Theses

This thesis focuses on the past, present, and future of food sustainability on Maui. It begins by explaining ancient Hawaiian agriculture and how this complex system of agriculture was deeply rooted in the customs and traditions of the Hawaiian people. The second section explores how this sustainable agricultural system changed after the arrival of Captain Cook in 1778. After western settlement, land that was once a communal resource became privatized. As land ownership shifted, the traditional subsistence agricultural system of Hawai’i began to change. Export crops such as sugar cane and pineapple became more widespread. As these crops shifted the …


The Stories Of Environmental Ethicists In Word And Image, Camille Robins Apr 2013

The Stories Of Environmental Ethicists In Word And Image, Camille Robins

Scripps Senior Theses

The Stories of Environmental Ethicists in Word and Image captures the spirit of three local people: John B. Cobb, Jr., Rosemary Radford Ruether, and Dean Freudenberger. As teachers, writers, activists, and members of the progressive retirement community Pilgrim Place, they’ve had a significant influence on the global environmental movement. The photographs and small essays in this project highlight who they are and what they’ve done, and how they continue to shape contemporary intellectual discourse. An analysis of how portrait photographers use images to tell stories and how they incorporate text in their photographic collections to create fuller, more robust pictures …


School Gardens: Reconnecting Children With Nature And Food, Alyssa M. Boyle Apr 2013

School Gardens: Reconnecting Children With Nature And Food, Alyssa M. Boyle

Scripps Senior Theses

This thesis discusses the importance of school gardens. First, two current environmental and societal problems are highlighted: the industrialized food system and what Richard Louv has termed, "Nature Deficit Disorder," in children. School gardens are then presented as an effective tool that can address and remedy such issues. Lastly, a how-to manual for implementing such projects in schools is provided as well as a few sample lesson plans to be used in conjunction with the garden in each subject across the curriculum.


Changes In Cell Morphology And The Cellular Localization Of Protein Kinase Dsk1 In Schizosaccharomyces Pombe In Response To Butylated Hydroxyanisole, Jacqueline T. Humphries Jan 2013

Changes In Cell Morphology And The Cellular Localization Of Protein Kinase Dsk1 In Schizosaccharomyces Pombe In Response To Butylated Hydroxyanisole, Jacqueline T. Humphries

Scripps Senior Theses

Dsk1 is the Schizosaccharomyces pombe functional homolog of human SRPK1, an SR protein kinase that regulates localization and function of SR protein splicing factors involved in transcription, alternative splicing, and mRNA export. It has been shown that a Dsk1 deletion strain of S. pombe is sensitive to exposure to butylated hydroxyanisole (BHA), a phenol derivative commonly used as a food preservative. Little is known about how BHA interacts with cells on a functional level, although it has been shown to be cytotoxic and tumorigenic. The aims of this thesis are to study the effect of BHA on eukaryotic cells and …


Dehydration In Southern Toads (Anaxyrus Terrestris): Metabolic Costs And Effects Of Temperature Selection, Claire E. Forster Jan 2013

Dehydration In Southern Toads (Anaxyrus Terrestris): Metabolic Costs And Effects Of Temperature Selection, Claire E. Forster

Scripps Senior Theses

Southern toads (Anaxyrus terrestris) are ectothermic terrestrial amphibians. As such they are sensitive to thermal and hydric variability. The interactive effect of hydration state and body temperature is not well understood. The aim of this study is to determine if the costs of dehydration vary at different temperatures and if so, whether toads will select different temperatures to minimize these costs. Costs of dehydration were evaluated by measuring metabolic rate at 100% and 85% hydration state, at 30 and 20 oC. Temperature selection of toads at 100% and 85% hydration state was measured using a thermal gradient. …


Effect Of Hinge Region Phosphorylation On The Localization Of Thp1 In Tetrahymena Thermophila, Emily Bulley, Emily Wiley Jan 2013

Effect Of Hinge Region Phosphorylation On The Localization Of Thp1 In Tetrahymena Thermophila, Emily Bulley, Emily Wiley

Scripps Senior Theses

Within the cell nucleus, there are regions of highly condensed, transcriptionally silent chromatin called heterochromatin. Heterochromatin plays an important role in both chromosomal stability and gene regulation within the cell. Heterochromatin assembly is mediated by Heterochromatin Protein 1 (HP1) binding to epigenetically marked histone tails, most notably methylated H3K9. HP1 is post-translationally phosphorylated at serine and threonine residues, and this phosphorylation has been shown to increase HP1’s binding affinity for methylated H3K9 and heterochromatin formation. To study the effect of phosphorylation on heterochromatin assembly and HP1 localization within the nucleus, the unicellular protozoan Tetrahymena thermophila was used. Tetrahymena is an …


Solid-State Nuclear Magnetic Resonance Analysis Of Cytosine-Methylated Dna Dodecamer, Caitlin A. Edmunds Jan 2013

Solid-State Nuclear Magnetic Resonance Analysis Of Cytosine-Methylated Dna Dodecamer, Caitlin A. Edmunds

Scripps Senior Theses

The interaction of deoxyribonucleic acid (DNA) and cellular proteins is absolutely central to any biological understanding of DNA replication, transcription, and even gene regulation. Because an incumbent protein latches not onto the four bases but onto the backbone phosphate groups of the nucleic acid, backbone dynamics directly pertain to an understanding of basic cell processes. Studies have unambiguously proven that DNA exists in a balance of two conformations, BI and BII, defined by the difference in their backbone torsion angles. A given DNA sequence expresses a preference for either BI or BII, though both exist in most samples (and are …


Do Bha And Bht Induce Morphological Changes And Dna Double-Strand Breaks In Schizosaccharomyces Pombe?, Amy V. Tran Jan 2013

Do Bha And Bht Induce Morphological Changes And Dna Double-Strand Breaks In Schizosaccharomyces Pombe?, Amy V. Tran

Scripps Senior Theses

Butylated Hydroxyanisole, BHA, and Butylated Hydroxytoluene, BHT, are commonly used as preservatives for our food as well as additives in many products such as cosmetics, petroleum, and medicine. Although their use has been approved by the Food and Drug Administration (FDA), there have been controversies and debates on whether these phenol derivatives or antioxidants are safe to use. Their accumulative toxicology and side effects need to be thoroughly investigated as we continue to consume them on a daily basis. Data obtained by genomic analysis in Tang lab suggested the involvement of DNA damage checkpoint/repair pathways in the response network to …


The Terrestrial Biogeochemical Cycle Of Barium: A Proposed Study To Examine Barium Flux In Mojave Desert Dust, Mehar Kaur Jan 2013

The Terrestrial Biogeochemical Cycle Of Barium: A Proposed Study To Examine Barium Flux In Mojave Desert Dust, Mehar Kaur

Scripps Senior Theses

Barium is a relatively abundant element in the crustal environments, Ba quantities can range from anywhere between 200ppm to 900ppm. Most common forms of Ba-minerals found in the environment are barite (BaSO4), witherite (BaCO3) and hollandite (Ba2Mn8O16). Ba is a useful element; it is used in various industries as a component in drilling fluids, in medical research and in manufacturing of various substances such as glass, ceramics, printing paper etc. However high quantity of Ba can be potentially toxic for the human body and can impair plant growth. It is …


Family Matters: An Analysis Of Genetic Relatedness Of Tetraclita Rubescens (The Pink Volcano Barnacle) Over Several Spatial Scales At Monterey And Bodega Bay, California, Kelly N. Chang Jan 2013

Family Matters: An Analysis Of Genetic Relatedness Of Tetraclita Rubescens (The Pink Volcano Barnacle) Over Several Spatial Scales At Monterey And Bodega Bay, California, Kelly N. Chang

Scripps Senior Theses

Inbreeding involves the mating of closely related individuals at a higher frequency than at random; this can decrease the average fitness of populations and individuals by reducing the presence of heterozygotes and augmenting the expression of deleterious genes. Since marine invertebrates exhibit widespread dispersal, their potential for inbreeding is often disregarded. The adult sessile state of barnacles creates the potential for inbreeding as a result of necessary copulation between neighboring individuals. Depending on the degree of mixing that occurs during dispersal, closely related individuals or siblings may settle in close proximity, generating the possibility of kin aggregation and consequent inbreeding. …