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California Polytechnic State University, San Luis Obispo

Theses/Dissertations

2018

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Full-Text Articles in Life Sciences

Entrepreneur`S Guide To Starting A Rabbit Agricultural Enterprise, Mary Maldonado Dec 2018

Entrepreneur`S Guide To Starting A Rabbit Agricultural Enterprise, Mary Maldonado

Agricultural Education and Communication

At San Luis Obispo, the University Cal Ploy has an Animal Science Department that offers over twenty enterprises pertaining to livestock production which “provide the environment for students to get outside the classroom and work with the animals in teams of students” (Cal Poly 2017-19). As reported from the “Animal Science Department Enterprise Class List”, the classes involved help develop technical skills by having students learn and work in active production settings with livestock such as cows, steers, pigs, lambs, goats, and chickens (Animal Science Department 2017-19). However, when compared to the livestock accounted for at a traditional county fair …


Agricultural Sciences Outreach Program, Maghan Lea England, Sophie Lorraine Johnston Dec 2018

Agricultural Sciences Outreach Program, Maghan Lea England, Sophie Lorraine Johnston

Agricultural Education and Communication

The College of Agriculture, Food, and Environmental Sciences (CAFES) mission statement and vision of the Agricultural Education and Communication Department is to develop future leaders, educators, and communicators to advance and advocate for the agricultural industry in a global economy (AGED, 2018). Student organizations, such as Agriculture Ambassadors and Agriculture Leadership Society, facilitate several outreach events to engage and excite prospective students in pursuing their higher education goals in agriculture at Cal Poly (CAFES Ag Council, 2018). In order to maintain growing student numbers, the Agricultural Education and Communication Department, specifically, the Agricultural Science major needs revamped recruiting efforts and …


Presence Of Antibiotic Resistant Salmonella Spp. In Backyard Poultry And Their Environment, Nicole Land Dec 2018

Presence Of Antibiotic Resistant Salmonella Spp. In Backyard Poultry And Their Environment, Nicole Land

Master's Theses

As keeping backyard poultry rises, human contact with zoonotic pathogens will increase. One such pathogen that backyard enthusiasts have exposure risks to is Salmonella spp. which may cause a potential public health threat due to its increasing multidrug resistancy. Salmonella spp. were present in 33 of 50 samples collected from 29 sites with backyard poultry coops in San Luis Obispo County during March to May in 2014. Two different Hardy-CHROME™ Salmonella Selective Media plates were used to culture and isolate positive samples of Salmonella spp.. Each positive isolate was tested for antimicrobial sensitivity to 6 standard antibiotics: Ampicillin, Bacitracin, …


The Thermal Ecology Of Sceloporus Occidentalis, Luis Patricio Burgos Dec 2018

The Thermal Ecology Of Sceloporus Occidentalis, Luis Patricio Burgos

Master's Theses

With temperatures rising globally, assessing the possible impacts of the changing climate becomes more and more urgent. Ectotherms are excellent indicators of potential climatic ramifications on biodiversity because of their heavy reliance on the environment for their thermoregulation. Studies have historically looked at thermal tolerance values to establish predictive models for population and species extinctions.

In chapter 1, we looked at recent studies that suggest that thermal tolerance may be a plastic trait and test the effects empirically. Most studies are based on captive lizards acclimated to laboratory conditions that do not necessarily reflect natural environments, and if thermal tolerance …


Cold Acclimation Response Of Non-Native Italian Wall Lizard (Podarcis Siculus) Populations From New York And California, Daniel Haro Dec 2018

Cold Acclimation Response Of Non-Native Italian Wall Lizard (Podarcis Siculus) Populations From New York And California, Daniel Haro

Master's Theses

Understanding how organisms respond to climatic variability and novel conditions is becoming an increasingly important task for ecologists. For ectotherms in the northern hemisphere, the response to cold is of special interest, considering that poleward range expansion events and increasing variability of temperatures during winter are already being observed as consequences of a warming planet. Though direction of change in physiological variables in response to cold is well studied in ectotherms, the extent to which traits can change and the rate at which they can change is not.

We compared the extent and rate of change in cold tolerance (CT …


Engineering Yeast To Evaluate Human Proteins Involved In Selective Rna Packaging During Hiv Particle Production, Ryan M. Bitter Dec 2018

Engineering Yeast To Evaluate Human Proteins Involved In Selective Rna Packaging During Hiv Particle Production, Ryan M. Bitter

Master's Theses

Despite recent advances in antiretroviral therapy, nearly 37 million people continue to live with human immunodeficiency virus (HIV). Basic and applied research on the assembly of HIV could be enhanced by using a genetically tractable organism, such as yeast, rather than mammalian cells. While previous studies showed that expression of the HIV Gag polyprotein in Saccharomyces cerevisiae spheroplasts resulted in the production of virus-like particles (VLPs), many questions regarding the utility of yeast in HIV assembly remain uninvestigated. Here, we report use of S. cerevisiae for both the production of VLPs with selectively packaged RNA and to evaluate the human …


Molecular Dynamics Of P21 And Fluorescent Sphingomyelin In Keratinocytes Exposed To Uvb, Tyler Malcolm Fraser Dec 2018

Molecular Dynamics Of P21 And Fluorescent Sphingomyelin In Keratinocytes Exposed To Uvb, Tyler Malcolm Fraser

Master's Theses

Non-melanoma skin cancer (NMSC) is the most common malignant tumor, representing more than a third of all malignant tumors combined and the incidence is increasing every year. Ultraviolet (UV) radiation from the sun is the most dominant factor contributing to tumor initiation and progression. The condition is most prevalent in populations with lighter skin and older age. Current pharmaceutical molecular research targets the inhibition of the Epidermal Growth Factor Receptor (EGFR), a receptor which is commonly over-expressed or dysregulated in skin malignancies. This study evaluates the content and location of the damage marker p21 within keratinocytes that were incubated in …


Indirect Food Web Interactions: Sea Otter Predation Linked To Invasion Success In A Marine Fouling Community, Maggie F. Jenkins Dec 2018

Indirect Food Web Interactions: Sea Otter Predation Linked To Invasion Success In A Marine Fouling Community, Maggie F. Jenkins

Master's Theses

Humans have caused grave ecological and economic damage worldwide through the introduction of invasive species. Understanding the factors that influence community susceptibility to invasion are important for controlling further spread of invasive species. Predators have been found to provide biotic resistance to invasion in both terrestrial and marine systems. However, predators can also have the opposite effect, and facilitate invasion. Therefore, recovery or expansion of native predators could facilitate the spread of invasive species. Needles et al. (2015) demonstrated that the threatened southern sea otter (Enhydra lutris nereis) facilitated the invasion of an exotic bryozoan, Watersipora subatra. …


Physiological Response Of The Giant Acorn Barnacle, Balanus Nubilus, To Air Exposure, Emily Jane Resner Nov 2018

Physiological Response Of The Giant Acorn Barnacle, Balanus Nubilus, To Air Exposure, Emily Jane Resner

Master's Theses

The giant acorn barnacle, Balanus nubilus, is a resident of the subtidal and low intertidal rocky shoreline on the Pacific Coast of North America (Alaska to Baja California). B. nubilusis notable for having the largest muscle fibers in the animal kingdom; fiber diameters that can exceed 3mm in adults! At such extreme sizes these muscle cells may be at risk for insufficient oxygen delivery to mitochondria owing to low SA:V ratios and long intracellular diffusion distances. Oxygen limitation to these muscles may be further exacerbated during low tide air exposure (emersion) or environmental hypoxia events, which are increasing …


Effect Of Spirotetramat Concentration On Anagyrus Pseudococci Mortality, Jacob Tice Nivison Oct 2018

Effect Of Spirotetramat Concentration On Anagyrus Pseudococci Mortality, Jacob Tice Nivison

Wine and Viticulture

Control of vine mealybug in vineyard systems is of critical importance due to economic injury potential including an ability to vector virus. Traditional management of this pest has relied heavily upon the use of systemic and contact insecticides. The systemic insecticide MoventoÒ, registered for vine mealybug and active ingredient spirotetramat, has been shown to be compatible with biological control. However potential side effects of chemical controls on beneficial insect populations is known to affect non target arthropods. This study examined the effect of the systemic insecticide spirotetramat on populations of adult parasitic wasps, Anagyrus psuedococci, at two concentrations with wasps …


Effect Of Evapotranspiration Rate On Almond Yield In California, Dafne Isaac Serrano Oct 2018

Effect Of Evapotranspiration Rate On Almond Yield In California, Dafne Isaac Serrano

Master's Theses

Since 2011, California has been under drought conditions. These conditions have not only affected water availability for farmers, but also production. California’s second most valuable crop, almonds, has been affected by drought conditions. This study used three models (Model 1-3) to describe almond yield variability from year to year and almond yield variability within a year in Kern County, CA. The study evaluated 185 almond farms that were classified in three locations (east side, west side and north west side). The years of the study were 2011 (wet year) and 2013-2015 (drought condition years). Model 1 determined a functional regression …


Parental Perspective And Feeding Practices Effects On Food Neophobia In Elementary-Age School Children, Farnoosh Ayoughi Oct 2018

Parental Perspective And Feeding Practices Effects On Food Neophobia In Elementary-Age School Children, Farnoosh Ayoughi

Master's Theses

The Food neophobia (FN) behaviors in children are developed during childhood and can be influenced by parental FN and feeding behaviors. The objective of this study was to evaluate the relationship between FN and fruit and vegetable neophobia (FVN) among parents, the parents-reports on child's behavior and child self-reports. The effect of parental feeding practices and demographic variables on children’s FN and FVN were evaluated. Sixty-eight parents paired with their elementary school children (aged 7-12 years) in San Luis Coastal Unified School District participated in this study. Results indicated that parents reported their children more neophobic than children self-reported neophobia; …


Effect Of Storage Period And Treatment On The Composition And Digestibility Of Olive Pomace In Cattle, Alexis Cecilia Ulloa Sep 2018

Effect Of Storage Period And Treatment On The Composition And Digestibility Of Olive Pomace In Cattle, Alexis Cecilia Ulloa

Master's Theses

Utilizing local by-products can serve to significantly reduce the current feed costs for ruminant producers. The objective of this study is (1) to evaluate the effects of chemical and bacterial inoculants in combination with ensiling, on the nutritional value and ensiling compatibility of olive pomace (OP) and (2) to identify the most biologically favorable treatment and ensiling day of OP for feeding to cattle. Freshly centrifuged OP (Olivas de Oro Olive Company, Creston, CA) was treated with one of four treatments: (1) no additives (control; CONT); (2) urea applied at 5% of DM (UREA; Agrium U.S. Inc, Loveland, CO); (3) …


An Assessment Of The Greatest Impacts On Distribution Uniformity For Drip And Micro Irrigation, Brooke Ashley Worden Sep 2018

An Assessment Of The Greatest Impacts On Distribution Uniformity For Drip And Micro Irrigation, Brooke Ashley Worden

Master's Theses

Using the Cal Poly Irrigation Training and Research Centers (ITRC) drip/micro evaluation program, global, or system, DUlq is computed by combining the component DUlq values of: pressure variation, uneven spacing between emitters, unequal drainage and “other” causes. “Other” causes include plugging, wear and manufacturing coefficient. The program also computes what percentage of the non-uniformity is due to each component. Burt (2004) showed that over 95% of the non-uniformity is due to “Other” causes and pressure differences. This thesis looks at what specifically in those components is driving the non-uniformity by analyzing various equipment and field practices and their …


Microfluidic Electrical Impedance Spectroscopy, John J. Foley Sep 2018

Microfluidic Electrical Impedance Spectroscopy, John J. Foley

Master's Theses

The goal of this study is to design and manufacture a microfluidic device capable of measuring changes in impedance valuesof microfluidic cell cultures. Tocharacterize this, an interdigitated array of electrodes was patterned over glass, where it was then bonded to a series of fluidic networks created in PDMS via soft lithography. The device measured ethanol impedance initially to show that values remain consistent over time. Impedance values of water and 1% wt. saltwater were compared to show that the device is able to detect changes in impedance, with up to a 60% reduction in electrical impedance in saltwater. Cells were …


Comparative Analysis Of Body Composition And Reference Values Of Visceral Adipose Tissues In Various American Collegiate Sports, Eshan M. Dandekar Sep 2018

Comparative Analysis Of Body Composition And Reference Values Of Visceral Adipose Tissues In Various American Collegiate Sports, Eshan M. Dandekar

Master's Theses

Background: Currently, body composition (BC) assessment is usually performed to diagnose disease states and accurately estimate certain types of tissues. In athletes, performing BC assessments helps gauge training and nutrition programs to see if they are adequately meeting the athlete’s needs to improve performance. Annual Dual Energy X-ray Absorptiometry (DXA) scans before the start of an athlete’s season can help identify an athlete’s preparedness or health before training begins.

Objective: To assess the preseason BC of four collegiate sports: Men’s basketball, men’s baseball, women’s volleyball, and women’s soccer, for Fat Mass (FM), bone mineral density BMD), Fat-Free Mass …


Modifying The Mineral Profile Of Crickets (Acheta Domesticus) Using A Supplemented Diet, Rhianne Morgan Le Maxwell Aug 2018

Modifying The Mineral Profile Of Crickets (Acheta Domesticus) Using A Supplemented Diet, Rhianne Morgan Le Maxwell

Master's Theses

Captive insectivores may consume invertebrates as all, or part of their overall diet. The challenge with feeding captive insectivores involves the limited number of invertebrate species that are commercially available, and the lack of key nutrients provided by these insects. Among these insects, a naturally occurring low concentration of calcium and an inverse calcium to phosphorus ratio may put insectivores at the risk of developing hypocalcemia. A strategy to correct this nutrient imbalance involves supplementing the insect diet with high concentrations of targeted nutrients – a term referred to as gut-loading. Current industry guidelines recommend feeding a supplemented diet for …


Detecting A Probiotic Product Within The Gut Of Broiler Chickens, Anneka Pisula Aug 2018

Detecting A Probiotic Product Within The Gut Of Broiler Chickens, Anneka Pisula

Master's Theses

As of January 2017, the U.S. poultry industry banned the use of antibiotics and now relies on alternatives such as probiotics to help protect animal health. Although probiotic use is not a new concept in the poultry industry, identifying the best combination of bacterial strains to generate an effective probiotic formula requires further investigation. This study aimed to detect a probiotic product of four bacterial strains (Pedioccoccus acidilactici, Pediococcus pentosaceus, Lactobacillus plantarum, and Bacillus subtilis) in a feeding trial with broiler chickens. Birds given the probiotic were predicted to show an improved growth performance with …


The Roles Of Tid1, Ndj1, And Spo16 In Distributive Segregation During Saccharomyces Cerevisiae Meiosis, Ethan Atticus Shaw Aug 2018

The Roles Of Tid1, Ndj1, And Spo16 In Distributive Segregation During Saccharomyces Cerevisiae Meiosis, Ethan Atticus Shaw

Master's Theses

Meiosis is a specialized form of cell division in sexually reproducing eukaryotes. Crossovers are physical connections formed between homologous chromosomes during meiosis; these connections help ensure normal segregation of homologous chromosomes at meiosis I. However, the yeast Saccharomyces cerevisiae and other eukaryotes can still segregate homologs properly even in the absence of some crossovers. This is due to a backup mechanism known as distributive segregation, which correctly segregates non-crossover chromosomes at a higher rate than if segregation were completely random. To study distributive segregation, we have generated diploid yeast with one homeologous chromosome pair consisting of a Saccharomyces cerevisiae chromosome …


Evaluation Of Endothelial Cell Responses To Elevated Glucose, Gabriella Sugerman Aug 2018

Evaluation Of Endothelial Cell Responses To Elevated Glucose, Gabriella Sugerman

Master's Theses

Developing a tissue-engineered Blood Vessel Mimic (BVM) to represent diabetic macrovascular disease could expedite design of new vascular devices specifically tailored to diabetic patients. In contribution toward this model, this thesis assessed Human Umbilical Vein Endothelial Cell (HUVEC) responses to high glucose conditions. Interleukin 6 (IL-6) and Cluster of Differentiation 36 (CD36) were selected to signify oxidative stress activity, a hallmark of diabetic macrovascular disease. Next, activity of potential reference genes B2M, HPRT1, and ACTB was assessed. All genes were found to exceed acceptable variability, so the E-ΔC T method of data analysis was selected. Next, cellular responses to high …


Quantifying The Environmental Performance Of A Stream Habitat Improvement Project, Cody Morse Aug 2018

Quantifying The Environmental Performance Of A Stream Habitat Improvement Project, Cody Morse

Master's Theses

River restoration projects are being installed worldwide to rehabilitate degraded river habitat. Many of these projects focus on stream habitat improvement (SHI), and an estimated 60%of the 37,000 projects listed in the National River Restoration Science Synthesis Program focus on SHI for salmon and trout species. These projects frequently lack a sufficient monitoring program or account for the environmental costs associated with SHI. The present study used life cycle assessment (LCA) techniques and topographic effectiveness monitoring to quantify environmental costs on the basis of geomorphic change. This methodology was a novel approach to assessing the cost-benefit relationship of SHI. To …


Crossing Corridors: Wildlife Use Of Jumpouts And Undercrossings Along A Highway With Wildlife Exclusion Fencing, Alex J. Jensen Aug 2018

Crossing Corridors: Wildlife Use Of Jumpouts And Undercrossings Along A Highway With Wildlife Exclusion Fencing, Alex J. Jensen

Master's Theses

Roads pose two central problems for wildlife: wildlife-vehicle collisions (WVCs) and habitat fragmentation. Wildlife exclusion fencing can reduce WVCs but can exacerbate fragmentation. In Chapter 1, I summarize the relevant studies addressing these two problems, with a focus on large mammals in North America. Chapters 2 and 3 summarize field assessments of technologies to reduce WVCs and maintain connectivity, specifically jumpout ramps and underpasses, along Highway 101 near San Luis Obispo, CA. In a fenced highway, some animals inevitably breach the fence and become trapped, which increases the risk of a wildlife-vehicle collision. Earthen escape ramps, or “jumpouts”, can allow …


Effects Of Polydatin On In Vitro Bovine Embryo Developmental Competence, Metabolism, And Cryopreservation, Corie Marie Owen Aug 2018

Effects Of Polydatin On In Vitro Bovine Embryo Developmental Competence, Metabolism, And Cryopreservation, Corie Marie Owen

Master's Theses

Bovine in vitro produced embryos suffer from poor developmental competence and altered metabolism which hinders their cryotolerance. Overall, the goals of this thesis were to improve oocyte and embryo culture with the antioxidant polydatin and to optimize slow freezing procedures. This thesis was designed as three experiments, and in each experiment, oocytes were aspirated from abattoir ovaries, matured for 23h, fertilized with semen from 1 of 3 bulls, and cultured in synthetic oviductal (SOF) based medium (SCF1) in 38.5 °C in 5% O2, 5% CO2 and 90% N2. Stage 7 blastocysts were stained with Nile …


Assessment Of Granulovirus, Spinosad, And Mating Disruption For Controlling Cydia Pomonella L. [Lepidoptera: Tortricidae] In Organic Coastal California Apple Orchards, Raven Lukehart Aug 2018

Assessment Of Granulovirus, Spinosad, And Mating Disruption For Controlling Cydia Pomonella L. [Lepidoptera: Tortricidae] In Organic Coastal California Apple Orchards, Raven Lukehart

Master's Theses

Codling moth, Cydia pomonella[Lepidoptera: Tortricidae], is a major entomological pest of apples, pears, and walnuts cross the world (Pajac et al. 2016). Female codling moths lay eggs on the apple exocarp and larvae burrow within the fruit causing economic losses to fruit growers.Organic apple orchards in San Luis Obispo, CA currently have three codling moth, Cydia pomonella,control options commercially available including granulovirus (CpVG), spinosad, and mating disruption. In field tests on apple (Malus), we compare percent fruit injury between treatments of granulovirus (2.43 oz/ha Cyd-X® organically approved, Certis USA, Columbia MD), spinosad (4.05 oz/ha Entrust® Naturalyte® …


The Effect Of Destoning And Enzymatic Pretreatments On The Biofuel Production From Olive Cake, Patrick Tai Jul 2018

The Effect Of Destoning And Enzymatic Pretreatments On The Biofuel Production From Olive Cake, Patrick Tai

Master's Theses

More than 16,000 tons of olive cake was produced in the United States in 2017. Olive cake is a by-product of olive oil extraction, which has limited animal feed potential, and poses an environmental threat when landfilled due to its high organic load and polyphenol content. This residue has potential for biofuel (bioethanol and biomethane) production because it is rich in polysaccharides such as pectin, hemicellulose, and cellulose. Yet, olive cake contains olive stones that can impede its conversion to biofuel. Therefore, two methods of destoning, centrifugation and screening by horizontal screw press, were first compared. Both methods removed an …


Second Annual Survey On Narrowleaf Milkweed (Asclepias Fascicularis) And Western Monarch Butterfly (Danaus Plexippus) Populations In Pozo, Ca, Emily Rose Hermann, Francis Villablanca Jun 2018

Second Annual Survey On Narrowleaf Milkweed (Asclepias Fascicularis) And Western Monarch Butterfly (Danaus Plexippus) Populations In Pozo, Ca, Emily Rose Hermann, Francis Villablanca

Biological Sciences

The decline in milkweed (Asclepias spp.) populations across the country, due to factors including agricultural development and herbicide use, has lead to a correlated reduction of monarch butterfly (Danaus plexippus) feeding and breeding habitat. In addition, the intentional planting of non-native milkweed in areas surrounding overwintering habitat has altered Western monarch butterfly migratory behavior, by allowing monarchs to depart from their ancestral migration pattern (timing and location), therefore decreasing the effective population size, and putting monarchs at risk of higher pathogen prevalence, due, in part, to an obligate protozoan parasite that is able to persist on the …


Preparation And Characterization Of Eva/Cort Microparticles For Rattlesnake Endocrinology Studies, Alexander C. Pauer Jun 2018

Preparation And Characterization Of Eva/Cort Microparticles For Rattlesnake Endocrinology Studies, Alexander C. Pauer

Materials Engineering

No abstract provided.


Hosting The Third Annual Young Women In Agriculture Career And Leadership Seminar, Emma E. Morris, Madyline J. Braught Jun 2018

Hosting The Third Annual Young Women In Agriculture Career And Leadership Seminar, Emma E. Morris, Madyline J. Braught

Agricultural Education and Communication

Agriculture has traditionally been a male-dominated industry; however, recent years have shown a significant growth in female presence. Women are beginning to take leadership roles both on the farm and within advocacy, lobbying, and business entities in the industry. According to the latest agricultural census data from the United States Department of Agriculture (USDA), in 2012, women farmers controlled seven percent of the nation’s farmland (Census, 2014). Additionally, women held leadership roles in 14 percent of the nation’s two million farms (Census, 2014). This data is several years old, and likely the numbers have grown since the last census was …


The Future Of Strawberry Production, Audrey Rebecca Ponce Jun 2018

The Future Of Strawberry Production, Audrey Rebecca Ponce

Agricultural Education and Communication

California’s agriculture industry is greatly diverse, with strawberries as a sector that most native Californians wouldn’t recognize as a large contributor to California’s agricultural economy. Within the last couple of years, strawberry production has undergone massive changes that are rapidly modifying the way strawberries are cultivated. The future of strawberry production will have completely new methods for growing, fumigating, and harvesting in just five to ten years (Guthman, 2016). The Cal Poly Strawberry Center opened in 2014 with a mission to “increase the sustainability of the California strawberry industry through research and education that addresses industry needs” (Cal Poly Strawberry …


Soil Science In Precision Agriculture Lesson Plan, Carson Ellis Cronkright Jun 2018

Soil Science In Precision Agriculture Lesson Plan, Carson Ellis Cronkright

Agricultural Education and Communication

Due to the increasing demands for the American agricultural industry to provide exceptional products at an increasing rate of production, as well as implement the practice of sustainable farming, it is imperative that more modern concepts be taught at a younger age (Ray, 2013). In order to inform students of advancements and the future of agriculture in the United States, curriculum and lesson plans should reflect this movement in industry in order to provide relevant information and maintain the highest quality of education possible. This project will provide a constructed lesson plan as one example of adopting more progressive methods …