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Full-Text Articles in Life Sciences

Demographic Modeling Of Conservation Strategies For The Yosemite Toad (Anaxyrus Canorus), Corrina Rebecca Kamoroff Jan 2022

Demographic Modeling Of Conservation Strategies For The Yosemite Toad (Anaxyrus Canorus), Corrina Rebecca Kamoroff

Cal Poly Humboldt theses and projects

The Yosemite toad (Anaxyrus canorus) is an anuran species endemic to the Sierra Nevada in California that, like many amphibians globally, has suffered population declines. The documented decline in A. canorus populations across their historic range highlights the need for an effective management strategy to protect the species from future extirpation. For this study, I estimated survival rates of A. canorus using a Cormack-Jolly-Seber model populated with data from a demographic study. I then used a female-only post-birth pulse stochastic Lefkovitch matrix model using vital rates I estimated and from the literature to simulate the effect of different …


Building Habitat Suitability Models To Examine Distribution Shifts For The Black-Headed Grosbeak, Hairy Woodpecker, And Yellow-Rumped Warbler Due To Drought, Fire, And Bark Beetle Infestation In The Pacific Northwest, Holli Nicole Pruhsmeier Jan 2021

Building Habitat Suitability Models To Examine Distribution Shifts For The Black-Headed Grosbeak, Hairy Woodpecker, And Yellow-Rumped Warbler Due To Drought, Fire, And Bark Beetle Infestation In The Pacific Northwest, Holli Nicole Pruhsmeier

Cal Poly Humboldt theses and projects

Spatial models that describe species distributions are valuable in determining how environmental impacts, such as drought, fire, and bark beetle infestations, have shifted these distributions and guide management decisions. In this thesis, I begin by comparing the utility of two datasets by building habitat suitability models for Black-headed Grosbeak, Hairy Woodpecker, and Yellow-rumped Warbler. By combining the datasets, I created response curves that explain habitat associations I expected from each species. I expanded upon the methods section to compare pre- and post-drought data from the 2011 California multi-year drought and evaluate how the three avian species have shifted their habitat …


Multivariate Habitat-Based Predictive Modeling Of Three Demersal Rockfish Species In Central California, Georgia R. Martel Jan 2020

Multivariate Habitat-Based Predictive Modeling Of Three Demersal Rockfish Species In Central California, Georgia R. Martel

Cal Poly Humboldt theses and projects

Accurate, spatially explicit models of rockfish abundance are critical in implementing ecosystem-based management strategies and designating essential fish habitats and marine protected areas. Multibeam bathymetry methods and visual, non-extractive submersible transect surveys were combined to collect environmental variables and fish abundance data at three distinct sites within the study region. Zero-adjusted models were developed using habitat classification analyses of high-resolution (5 m) digital elevation models. Model accuracies were assessed by using a reserved subset of the original datasets. To demonstrate that a model’s predictive power was linked to its spatial origins, Mean Absolute Error and coefficient of determination values were …


Recolonization Potential For Coho Salmon (Oncorhynchus Kisutch) In Tributaries To The Klamath River After Dam Removal, Max M. Ramos Jan 2020

Recolonization Potential For Coho Salmon (Oncorhynchus Kisutch) In Tributaries To The Klamath River After Dam Removal, Max M. Ramos

Cal Poly Humboldt theses and projects

Removal of four major dams on the Klamath River is scheduled to begin in 2023, restoring access to greater than 50 km of historic mainstem habitat for coho salmon. However, mainstem habitat may not be suitable for juvenile coho salmon due to elevated water temperatures and high concentrations of infectious myxospores in the summer and fast water velocities in the winter. Small, cooler tributaries can provide essential habitat for escape from deleterious conditions in the mainstem Klamath River. I used temperature and other physical features of six tributaries to the Klamath River above Iron Gate Dam to assess their capacity …


Contribution Of Juvenile Estuarine Residency In A Bar-Built Estuary To Recruitment Of Chinook Salmon (Oncorhynchus Tshawytscha), Emily Katherine Chen Jan 2019

Contribution Of Juvenile Estuarine Residency In A Bar-Built Estuary To Recruitment Of Chinook Salmon (Oncorhynchus Tshawytscha), Emily Katherine Chen

Cal Poly Humboldt theses and projects

Estuaries are commonly touted as nurseries for out-migrating salmonids, providing higher prey availability than streams, a physiological transition zone, and refugee from marine predators. Yet the diversity of estuaries makes it difficult to generalize the effect they have on salmonid recruitment. In bar-built estuaries, sandbars form at the mouth of rivers during periods of low flow, closing access to the ocean and disrupting outmigration. In this thesis, I evaluated how residency in a bar-built estuary affects the growth, survival, and ultimately recruitment of Chinook salmon (Oncorhynchus tshawytscha) in Redwood Creek, California. I conducted a mark-recapture experiment on out-migrating …


Multiscale Habitat Suitability Modeling For Canary Rockfish (Sebastes Pinniger) Along The Northern California Coast, Portia N. Saucedo Jan 2017

Multiscale Habitat Suitability Modeling For Canary Rockfish (Sebastes Pinniger) Along The Northern California Coast, Portia N. Saucedo

Cal Poly Humboldt theses and projects

Detailed spatially-explicit data of the potential habitat of commercially important rockfish species are a critical component for the purposes of marine conservation, evaluation, and planning. Predictive habitat modeling techniques are widely used to identify suitable habitat in un-surveyed regions. This study elucidates the predicted distribution of canary rockfish (Sebastes pinniger) along the largely un-surveyed northern California coast using data from visual underwater surveys and predictive terrain complexity covariates. I used Maximum Entropy (MaxEnt) modelling software to identify regions of suitable habitat for S. pinniger greater than nine cm in total length at two spatial scales. The results of …


An Estimation Of Potential Salmonid Habitat Capacity In The Upper Mainstem Eel River, California, Emily J. Cooper Jan 2017

An Estimation Of Potential Salmonid Habitat Capacity In The Upper Mainstem Eel River, California, Emily J. Cooper

Cal Poly Humboldt theses and projects

In Northern California’s Eel River watershed, the two dams that make up the Potter Valley Project (PVP) restrict the distribution and production of anadromous salmonids, and current populations of Chinook Salmon (Oncorhynchus tshawytscha) and steelhead trout (O. mykiss) in the upper mainstem Eel River are in need of recovery. In anticipation of the upcoming FERC relicensing of the PVP, this project provides an estimation of the extent of potential salmonid habitat and its capacity for steelhead trout and Chinook Salmon in the upper mainstem Eel River watershed above the impassable Scott Dam. Using three fish passage …