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2016

Virus

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Articles 1 - 14 of 14

Full-Text Articles in Life Sciences

How We’Ll Fight The Next Deadly Virus Ted Talk Annotated Resource List, Susie Roy Oct 2016

How We’Ll Fight The Next Deadly Virus Ted Talk Annotated Resource List, Susie Roy

Undergraduate Research Award

No abstract provided.


Investigating The Infection And Persistence Of Sindbis Virus In Host Neurons, Gavin Schroter, Sally Hall, Monica Borucki Aug 2016

Investigating The Infection And Persistence Of Sindbis Virus In Host Neurons, Gavin Schroter, Sally Hall, Monica Borucki

STAR Program Research Presentations

Sindbis virus, an Alphavirus in the Togaviridae family, is an enveloped, single-stranded positive-sense RNA virus. Found mostly in parts of Africa, Australia, Egypt, Philippines, and Northern Europe – it is known to cause Ockelbo or Pogosta disease [1]. This disease is characterized by the sudden onset of fever, headache, and arthralgia; followed by arthritis, rash, fatigue, and muscle pain. The symptoms are gone within 14 days, though cases have shown joint pain to last from 12 months to 2 and a half years [4]. Common to several other viruses, Sindbis is transmitted from birds (its reservoir) to humans via an …


Discover And Analysis Of Grapevine Vein-Clearing Virus In Ampelopsis Cordata, Sylvia Marie Petersen Jul 2016

Discover And Analysis Of Grapevine Vein-Clearing Virus In Ampelopsis Cordata, Sylvia Marie Petersen

MSU Graduate Theses

A recent threat to the sustainability of grape production is Grapevine vein-clearing virus (GVCV), the first DNA virus discovered in grapevines. Infection with GVCV leads to vine decline, lower quality berries, and eventual death of the grapevine. Since GVCV was discovered in cultivated grapevines, research has been dedicated to investigating its range and origin. The entire genome of the first GVCV isolate from a grape cultivar ‘Chardonel' has been deposited in GenBank and is used as a reference genome. More recently, two GVCV isolates were found in native Vitis rupestris in Missouri. In this thesis project, I applied polymerase chain …


The Ferrojan Horse Hypothesis: Iron-Virus Interactions In The Ocean, Chelsea Bonnain, Mya Breitbart, Kristen N. Buck Jun 2016

The Ferrojan Horse Hypothesis: Iron-Virus Interactions In The Ocean, Chelsea Bonnain, Mya Breitbart, Kristen N. Buck

Marine Science Faculty Publications

Iron is an essential nutrient and the sub-nanomolar concentrations of iron in open ocean surface waters are often insufficient to support optimal biological activity. More than 99.9% of dissolved iron in these waters is bound to organic ligands, yet determining the identity of these ligands in seawater remains a major challenge. Among the potential dissolved organic ligands in the colloidal fraction captured between a 0.02 and a 0.2 μm filter persists an extremely abundant biological candidate: viruses, most of which are phages (viruses that infect bacteria). Recent work in non-marine model systems has revealed the presence of iron ions within …


Characterization Of Influenza Nucleoprotein Body Domain As Antiviral Target, Alicia Morgan Davis Jun 2016

Characterization Of Influenza Nucleoprotein Body Domain As Antiviral Target, Alicia Morgan Davis

Electronic Theses, Projects, and Dissertations

Influenza is a segmented negative strand RNA virus. Each RNA segment is encapsulated by viral nucleoprotein (NP) and bound by the viral RNA dependent RNA polymerase (RdRP) to form viral ribonucleoproteins (vRNPs) responsible for RNA synthesis. NP is a structural component of the vRNP but also interacts with both viral and host factors to regulate viral RNA expression. NP is conserved among influenza A isolates, making NP interactions compelling antiviral targets. Here I characterize mutations within 5 amino acids of NP that comprise an accessible region of the NP body domain, as determined by NP crystal structure. This region was …


Characterization Of Induced Rnai Silencing Of Vaccinia Virus Essential Genes, Kewa Jiang May 2016

Characterization Of Induced Rnai Silencing Of Vaccinia Virus Essential Genes, Kewa Jiang

University Scholar Projects

Vaccinia virus (VACV) is a large double-stranded DNA virus and the prototypical member of the family Poxviridae and is most notable for its use as the vaccine that eradicated smallpox (variola virus). More recently, VACV has been used to develop recombinant vaccines and immunotherapies. However, many of these processes require VACV replication to be tightly controlled. RNA interference (RNAi) is a powerful tool for in vitro silencing of mRNAs that are complimentary to 19-21 base pairs (bp) of double-stranded RNA (dsRNA). This project outlines the design and preliminary analysis of two inducible RNAi silencing constructs targeting multiple VACV essential genes …


Stability Of Norwalk Virus Capsid Protein Interfaces Evaluated By In Silico Nanoindentation, Prakhar Bansal May 2016

Stability Of Norwalk Virus Capsid Protein Interfaces Evaluated By In Silico Nanoindentation, Prakhar Bansal

University Scholar Projects

Studying the mechanical properties of viral capsids can give several insights into not only the lifecycle of the virus, but also into potential drug targets to thwart the progression of viral infection. Nanoindentation using an atomic force microscope is a useful technique for determining structural properties of small molecules and particles, and is commonly used to study viral capsids. This technique utilizes the probe of the microscope to push down on the capsid and record the forces along the indentation path. We ran this experiment in silico where we simulated the nanoindentation of Norwalk virus capsids using molecular dynamics. Running …


Characterization Of Transcriptional Control Elements In Cluster E Mycobacteriophage Ukulele, Campbell Belisle Haley May 2016

Characterization Of Transcriptional Control Elements In Cluster E Mycobacteriophage Ukulele, Campbell Belisle Haley

Honors College

Mycobacteriophage (phage) are a diverse group of viruses that infect Mycobacterium. Their study allows further understanding of viral evolution and genetics. Phage tightly control gene expression and transcribe their genes using host RNA polymerases. This project identifies potential transcriptional control elements in the genome of mycobacteriophage Ukulele. Promoters are sequences of the genome that allow binding of RNA polymerase and initiation of transcription. 21 putative promoters were identified in the Ukulele genome. To confirm transcriptional activity from putative promoters, a GFP reporter system was developed in mycobacterial cells. Intrinsic terminators are mRNA sequences that form secondary structure during transcription …


Is A Mitochondrial Plasmid Really A Virus?, Mackenzie Strehle Apr 2016

Is A Mitochondrial Plasmid Really A Virus?, Mackenzie Strehle

UCARE Research Products

In addition to containing a large and complex mitochondrial genome, the mitochondria of several species of plants have been shown to contain an independent, self-replicating DNA molecule in the form of a plasmid. Plants in the Brassica genus contain a linear plasmid that is approximately 11.6 kilobases in length. The plasmid is characterized by the presence of terminal inverted repeats and covalently bonded proteins at its termini (Handa 2008). The plasmid also contains six ORFs that encode DNA and RNA polymerases and a number of unknown proteins (Figure 1). Currently, both the function of this plasmid and the mechanisms by …


Plant Diseases [2016], Kimberly Leonberger, Kelly Jackson, Robbie Smith, Nicole Ward Gauthier Mar 2016

Plant Diseases [2016], Kimberly Leonberger, Kelly Jackson, Robbie Smith, Nicole Ward Gauthier

Agriculture and Natural Resources Publications

Anyone who has ever planted a garden knows not only the rewards of beautiful flowers, fruit, and/ or vegetables, but also the disappointment when plants become diseased or damaged. Many factors cause plants to exhibit poor vigor, changes in appearance, or even death. Both abiotic (non-living) and biotic (living) factors can negatively impact plant heath. Disorders that result from non-living factors (such as nutrient deficiencies, over/under watering, temperature stress, and chemical damage) are discussed in subsequent chapters. This chapter focuses on those living organisms that cause disease: fungi, water molds, bacteria, viruses, nematodes, phytoplasmas, and parasitic plants.


Micrornas Expressed During Viral Infection: Biomarker Potential And Therapeutic Considerations, Jennifer Louten, Michael Beach, Kristina Palermino, Maria Weeks, Gabrielle Holenstein Jan 2016

Micrornas Expressed During Viral Infection: Biomarker Potential And Therapeutic Considerations, Jennifer Louten, Michael Beach, Kristina Palermino, Maria Weeks, Gabrielle Holenstein

Faculty Articles

MicroRNAs (miRNAs) are short sequences of noncoding single-stranded RNAs that exhibit inhibitory effects on complementary target mRNAs. Recently, it has been discovered that certain viruses express their own miRNAs, while other viruses activate the transcription of cellular miRNAs for their own benefit. This review summarizes the viral and/or cellular miRNAs that are transcribed during infection, with a focus on the biomarker and therapeutic potential of miRNAs (or their antagomirs). Several human viruses of clinical importance are discussed, namely, herpesviruses, polyomaviruses, hepatitis B virus, hepatitis C virus, human papillomavirus, and human immunodeficiency virus.


Suppression Of Pulmonary Innate Immunity By Pneumoviruses, Jayeeta Dhar Jan 2016

Suppression Of Pulmonary Innate Immunity By Pneumoviruses, Jayeeta Dhar

ETD Archive

Pneumonia Virus of Mice (PVM) and Respiratory Syncytial Virus (RSV) are negative sense, single-stranded, enveloped RNA viruses from Pneumovirus genus, Paramyxoviridae family. RSV is the leading cause of respiratory diseases in infants. PVM causes similar respiratory illness in mice. PVM is used as an animal model to study RSV pathogenesis because of its similarity with RSV infection. Viral infection induces type I interferon (IFN) response as an antiviral strategy. PVM and RSV both have two non-structural (NS) proteins that are known to be IFN antagonists. While RSV can target different signaling components of IFN pathway, the mechanism of IFN suppression …


The Role Of Porcine Reproductive And Respiratory Syndrome Virus As A Risk Factor In The Outbreak Of Porcine Epidemic Diarrhea In Immunized Swine Herds, Mei-Zhou Huang, Hui Wang, Sheng-Yi Wang, Dong-An Cui, Xin Tuo, Yong-Ming Liu Jan 2016

The Role Of Porcine Reproductive And Respiratory Syndrome Virus As A Risk Factor In The Outbreak Of Porcine Epidemic Diarrhea In Immunized Swine Herds, Mei-Zhou Huang, Hui Wang, Sheng-Yi Wang, Dong-An Cui, Xin Tuo, Yong-Ming Liu

Turkish Journal of Veterinary & Animal Sciences

The aim of the study was to investigate the relation between porcine epidemic diarrhea (PED) and porcine reproductive and respiratory syndrome virus (PRRSV). Here, we constructed a dynamic clinical experimental model in which sows were infected with PRRSV. The stability of the experimental model was surveyed by detecting the levels of antibodies against classical swine fever virus (CSFV) or PRRSV, respectively. In both group A (infected group) and group B (healthy group), the CSFV antibody level was not significantly different (P > 0.05). In group B, the PRRSV antibody level was also not significantly different (P > 0.05) at the three times …


Development And Characterization Of A Recombinant Orf Virus Vector Expressing The Spike Protein Of Porcine Epidemic Diarrhea Virus, Kyle Hain Jan 2016

Development And Characterization Of A Recombinant Orf Virus Vector Expressing The Spike Protein Of Porcine Epidemic Diarrhea Virus, Kyle Hain

Electronic Theses and Dissertations

Orf virus (ORFV), the type member of the genus Parapoxvirus of the family Poxviridae, causes orf or cutaneous pustular dermatitis in sheep and goats. ORFV is a ubiquitous virus capable of re-infecting its hosts multiple times over time. ORFV causes a non-systemic, self-limiting disease which is usually restricted to the skin surrounding the virus entry sites. ORFV has evolved several immunomodulatory proteins (IMPs) that evade and/or modulate host immune responses to infection and contribute to virus virulence and disease pathogenesis. Given biological properties and unique immunomodula tor y properties, ORFV has gained significant attention in recent years for its …